EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000016755 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2%2C subunit C
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 6728 bases
Position: chrNHOQ01001766.1:1467515-1474242
Accession: ZDB-GENE-030131-2469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000024824	RNase_H2_suC	PF08615.11	1.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000025086	-	5397	-	ENSGAFP00000024824	164 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000016755's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016755's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016755	rnaseh2c	83	84.559	ENSAPOG00000012901	rnaseh2c	99	84.559	Acanthochromis_polyacanthus
ENSGAFG00000016755	rnaseh2c	83	77.941	ENSACIG00000022433	rnaseh2c	100	77.941	Amphilophus_citrinellus
ENSGAFG00000016755	rnaseh2c	83	83.824	ENSAOCG00000016855	rnaseh2c	100	83.824	Amphiprion_ocellaris
ENSGAFG00000016755	rnaseh2c	87	81.818	ENSAPEG00000009850	rnaseh2c	100	84.559	Amphiprion_percula
ENSGAFG00000016755	rnaseh2c	83	80.882	ENSATEG00000014395	rnaseh2c	100	80.882	Anabas_testudineus
ENSGAFG00000016755	rnaseh2c	83	78.676	ENSACLG00000016950	rnaseh2c	100	78.676	Astatotilapia_calliptera
ENSGAFG00000016755	rnaseh2c	82	66.667	ENSAMXG00000001210	rnaseh2c	100	66.667	Astyanax_mexicanus
ENSGAFG00000016755	rnaseh2c	82	52.239	ENSCPBG00000023408	-	96	52.239	Chrysemys_picta_bellii
ENSGAFG00000016755	rnaseh2c	83	77.941	ENSCSEG00000005808	rnaseh2c	99	77.941	Cynoglossus_semilaevis
ENSGAFG00000016755	rnaseh2c	83	92.647	ENSCVAG00000006337	rnaseh2c	100	92.647	Cyprinodon_variegatus
ENSGAFG00000016755	rnaseh2c	83	65.441	ENSDARG00000089637	rnaseh2c	99	65.441	Danio_rerio
ENSGAFG00000016755	rnaseh2c	70	49.587	ENSEBUG00000014939	rnaseh2c	77	49.587	Eptatretus_burgeri
ENSGAFG00000016755	rnaseh2c	82	67.407	ENSELUG00000007345	rnaseh2c	99	67.407	Esox_lucius
ENSGAFG00000016755	rnaseh2c	79	94.574	ENSFHEG00000002419	rnaseh2c	95	93.846	Fundulus_heteroclitus
ENSGAFG00000016755	rnaseh2c	55	74.444	ENSGMOG00000008727	rnaseh2c	100	74.444	Gadus_morhua
ENSGAFG00000016755	rnaseh2c	82	52.239	ENSGAGG00000008193	-	96	52.239	Gopherus_agassizii
ENSGAFG00000016755	rnaseh2c	83	80.147	ENSHBUG00000012806	rnaseh2c	100	80.147	Haplochromis_burtoni
ENSGAFG00000016755	rnaseh2c	83	72.059	ENSHCOG00000007177	rnaseh2c	100	72.059	Hippocampus_comes
ENSGAFG00000016755	rnaseh2c	83	63.235	ENSIPUG00000018044	rnaseh2c	100	63.235	Ictalurus_punctatus
ENSGAFG00000016755	rnaseh2c	83	80.147	ENSKMAG00000004184	rnaseh2c	100	80.147	Kryptolebias_marmoratus
ENSGAFG00000016755	rnaseh2c	83	78.102	ENSLBEG00000005742	rnaseh2c	100	78.102	Labrus_bergylta
ENSGAFG00000016755	rnaseh2c	79	57.364	ENSLACG00000010120	-	93	56.818	Latimeria_chalumnae
ENSGAFG00000016755	rnaseh2c	83	75.735	ENSMAMG00000021610	rnaseh2c	100	75.735	Mastacembelus_armatus
ENSGAFG00000016755	rnaseh2c	83	79.412	ENSMZEG00005004796	rnaseh2c	100	79.412	Maylandia_zebra
ENSGAFG00000016755	rnaseh2c	83	78.676	ENSMMOG00000002869	rnaseh2c	100	78.676	Mola_mola
ENSGAFG00000016755	rnaseh2c	83	81.752	ENSMALG00000012198	rnaseh2c	100	81.752	Monopterus_albus
ENSGAFG00000016755	rnaseh2c	83	80.147	ENSNBRG00000001462	rnaseh2c	100	80.147	Neolamprologus_brichardi
ENSGAFG00000016755	rnaseh2c	84	79.562	ENSONIG00000005338	rnaseh2c	100	79.562	Oreochromis_niloticus
ENSGAFG00000016755	rnaseh2c	83	73.529	ENSORLG00000023473	rnaseh2c	100	73.529	Oryzias_latipes
ENSGAFG00000016755	rnaseh2c	84	72.993	ENSORLG00020019053	rnaseh2c	92	72.993	Oryzias_latipes_hni
ENSGAFG00000016755	rnaseh2c	84	74.453	ENSORLG00015017067	rnaseh2c	92	74.453	Oryzias_latipes_hsok
ENSGAFG00000016755	rnaseh2c	83	72.059	ENSOMEG00000018607	rnaseh2c	100	72.059	Oryzias_melastigma
ENSGAFG00000016755	rnaseh2c	83	58.824	ENSPKIG00000019331	rnaseh2c	100	58.824	Paramormyrops_kingsleyae
ENSGAFG00000016755	rnaseh2c	83	92.647	ENSPFOG00000009415	rnaseh2c	100	92.647	Poecilia_formosa
ENSGAFG00000016755	rnaseh2c	83	94.118	ENSPLAG00000023330	rnaseh2c	100	94.118	Poecilia_latipinna
ENSGAFG00000016755	rnaseh2c	83	92.647	ENSPMEG00000003696	rnaseh2c	100	92.647	Poecilia_mexicana
ENSGAFG00000016755	rnaseh2c	91	86.957	ENSPREG00000015384	rnaseh2c	80	86.957	Poecilia_reticulata
ENSGAFG00000016755	rnaseh2c	83	80.147	ENSPNYG00000014766	rnaseh2c	100	80.147	Pundamilia_nyererei
ENSGAFG00000016755	rnaseh2c	82	64.444	ENSPNAG00000019111	rnaseh2c	99	64.444	Pygocentrus_nattereri
ENSGAFG00000016755	rnaseh2c	82	65.185	ENSSFOG00015005760	rnaseh2c	99	65.185	Scleropages_formosus
ENSGAFG00000016755	rnaseh2c	83	78.676	ENSSMAG00000017738	rnaseh2c	100	78.676	Scophthalmus_maximus
ENSGAFG00000016755	rnaseh2c	83	80.882	ENSSDUG00000017285	rnaseh2c	100	80.882	Seriola_dumerili
ENSGAFG00000016755	rnaseh2c	83	82.353	ENSSLDG00000016030	rnaseh2c	100	82.353	Seriola_lalandi_dorsalis
ENSGAFG00000016755	rnaseh2c	79	49.624	ENSSPUG00000000842	-	89	48.529	Sphenodon_punctatus
ENSGAFG00000016755	rnaseh2c	83	79.412	ENSSPAG00000007536	rnaseh2c	100	79.412	Stegastes_partitus
ENSGAFG00000016755	rnaseh2c	83	70.588	ENSTRUG00000021845	rnaseh2c	100	70.588	Takifugu_rubripes
ENSGAFG00000016755	rnaseh2c	83	75.735	ENSTNIG00000000431	rnaseh2c	100	75.735	Tetraodon_nigroviridis
ENSGAFG00000016755	rnaseh2c	82	47.015	ENSXETG00000032466	-	98	47.015	Xenopus_tropicalis
ENSGAFG00000016755	rnaseh2c	83	94.118	ENSXCOG00000001611	rnaseh2c	100	94.118	Xiphophorus_couchianus
ENSGAFG00000016755	rnaseh2c	100	96.341	ENSXMAG00000003147	rnaseh2c	100	96.341	Xiphophorus_maculatus