EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000016803 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 1005 bases
Position: chrNHOQ01002284.1:499434-500438
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000024880	RRM_1	PF00076.22	1.6e-29	1	2
ENSGAFP00000024880	RRM_1	PF00076.22	1.6e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000025142	-	1005	-	ENSGAFP00000024880	334 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000016803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016803's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000016803	-	61	66.995	ENSGAFG00000016679	-	76	61.905
ENSGAFG00000016803	-	57	50.521	ENSGAFG00000004116	HNRNPA3	54	51.685
ENSGAFG00000016803	-	64	32.883	ENSGAFG00000006974	msi2a	82	34.177
ENSGAFG00000016803	-	60	37.500	ENSGAFG00000008331	hnrnpaba	64	34.906
ENSGAFG00000016803	-	51	37.059	ENSGAFG00000011265	-	66	35.514
ENSGAFG00000016803	-	60	37.321	ENSGAFG00000003714	hnrnpd	62	36.842
ENSGAFG00000016803	-	64	52.804	ENSGAFG00000007751	-	68	40.084
ENSGAFG00000016803	-	68	36.481	ENSGAFG00000021522	MSI1	55	38.150
ENSGAFG00000016803	-	55	34.146	ENSGAFG00000019917	rbmx	93	41.935

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016803	-	54	90.503	ENSACIG00000021815	-	87	90.503	Amphilophus_citrinellus
ENSGAFG00000016803	-	63	52.113	ENSAOCG00000005289	-	65	47.222	Amphiprion_ocellaris
ENSGAFG00000016803	-	63	52.113	ENSAPEG00000004179	-	65	47.222	Amphiprion_percula
ENSGAFG00000016803	-	55	53.514	ENSATEG00000022918	hnrnpa1a	84	53.371	Anabas_testudineus
ENSGAFG00000016803	-	65	73.913	ENSATEG00000003423	-	76	73.913	Anabas_testudineus
ENSGAFG00000016803	-	53	62.712	ENSACAG00000017109	-	67	56.621	Anolis_carolinensis
ENSGAFG00000016803	-	64	50.935	ENSACLG00000006940	-	53	53.933	Astatotilapia_calliptera
ENSGAFG00000016803	-	53	72.727	ENSAMXG00000037730	-	52	72.727	Astyanax_mexicanus
ENSGAFG00000016803	-	53	55.682	ENSAMXG00000006296	hnrnpa1a	59	49.550	Astyanax_mexicanus
ENSGAFG00000016803	-	64	50.000	ENSCSEG00000007589	hnrnpa1a	66	52.247	Cynoglossus_semilaevis
ENSGAFG00000016803	-	53	65.909	ENSCSEG00000014051	-	72	65.909	Cynoglossus_semilaevis
ENSGAFG00000016803	-	53	55.056	ENSCVAG00000012637	hnrnpa1a	53	55.056	Cyprinodon_variegatus
ENSGAFG00000016803	-	59	61.111	ENSDORG00000026425	-	50	64.000	Dipodomys_ordii
ENSGAFG00000016803	-	57	52.632	ENSELUG00000007372	-	50	52.809	Esox_lucius
ENSGAFG00000016803	-	53	72.881	ENSGMOG00000020353	-	92	72.881	Gadus_morhua
ENSGAFG00000016803	-	63	45.344	ENSGACG00000009435	-	61	42.391	Gasterosteus_aculeatus
ENSGAFG00000016803	-	64	50.935	ENSHBUG00000005647	hnrnpa1a	53	53.933	Haplochromis_burtoni
ENSGAFG00000016803	-	56	54.839	ENSIPUG00000022440	-	72	57.055	Ictalurus_punctatus
ENSGAFG00000016803	-	57	49.206	ENSIPUG00000002023	hnrnpa1a	68	51.429	Ictalurus_punctatus
ENSGAFG00000016803	-	54	71.823	ENSIPUG00000001991	-	77	72.222	Ictalurus_punctatus
ENSGAFG00000016803	-	53	43.503	ENSJJAG00000009178	-	62	40.376	Jaculus_jaculus
ENSGAFG00000016803	-	53	53.933	ENSKMAG00000020859	-	53	53.933	Kryptolebias_marmoratus
ENSGAFG00000016803	-	58	46.903	ENSLBEG00000010010	hnrnpa1a	65	45.575	Labrus_bergylta
ENSGAFG00000016803	-	54	46.961	ENSMFAG00000028351	-	54	47.222	Macaca_fascicularis
ENSGAFG00000016803	-	62	47.598	ENSMAMG00000007606	-	52	53.933	Mastacembelus_armatus
ENSGAFG00000016803	-	64	50.935	ENSMZEG00005027173	hnrnpa1a	53	53.933	Maylandia_zebra
ENSGAFG00000016803	-	55	52.717	ENSMMOG00000008251	hnrnpa1a	74	53.371	Mola_mola
ENSGAFG00000016803	-	54	92.222	ENSMALG00000008886	-	87	92.222	Monopterus_albus
ENSGAFG00000016803	-	63	51.415	ENSMALG00000014091	hnrnpa1a	52	53.371	Monopterus_albus
ENSGAFG00000016803	-	64	50.935	ENSNBRG00000018441	-	54	53.933	Neolamprologus_brichardi
ENSGAFG00000016803	-	55	73.514	ENSNBRG00000014469	-	83	75.281	Neolamprologus_brichardi
ENSGAFG00000016803	-	59	59.563	ENSORLG00000029240	-	99	60.112	Oryzias_latipes
ENSGAFG00000016803	-	54	54.190	ENSORLG00000008001	-	54	54.494	Oryzias_latipes
ENSGAFG00000016803	-	54	59.551	ENSORLG00020006043	-	59	60.694	Oryzias_latipes_hni
ENSGAFG00000016803	-	60	55.610	ENSORLG00020022498	-	89	58.427	Oryzias_latipes_hni
ENSGAFG00000016803	-	54	54.190	ENSORLG00020006582	hnrnpa1a	83	54.802	Oryzias_latipes_hni
ENSGAFG00000016803	-	54	53.631	ENSORLG00015022294	-	54	53.933	Oryzias_latipes_hsok
ENSGAFG00000016803	-	53	71.591	ENSPMGG00000016392	-	87	72.000	Periophthalmus_magnuspinnatus
ENSGAFG00000016803	-	54	53.846	ENSPMGG00000011804	hnrnpa1a	66	54.140	Periophthalmus_magnuspinnatus
ENSGAFG00000016803	-	64	52.804	ENSPFOG00000001825	-	53	55.056	Poecilia_formosa
ENSGAFG00000016803	-	64	52.804	ENSPMEG00000002425	-	53	55.056	Poecilia_mexicana
ENSGAFG00000016803	-	55	73.514	ENSPNYG00000020729	-	91	75.281	Pundamilia_nyererei
ENSGAFG00000016803	-	53	51.136	ENSPNAG00000007752	hnrnpa1a	71	50.847	Pygocentrus_nattereri
ENSGAFG00000016803	-	53	56.250	ENSPNAG00000021630	-	70	45.852	Pygocentrus_nattereri
ENSGAFG00000016803	-	59	83.417	ENSSMAG00000010246	-	80	83.333	Scophthalmus_maximus
ENSGAFG00000016803	-	53	69.643	ENSSMAG00000010279	-	94	69.643	Scophthalmus_maximus
ENSGAFG00000016803	-	54	53.073	ENSSMAG00000004641	hnrnpa1a	73	47.368	Scophthalmus_maximus
ENSGAFG00000016803	-	56	54.301	ENSSDUG00000013908	hnrnpa1a	84	54.444	Seriola_dumerili
ENSGAFG00000016803	-	52	73.410	ENSSDUG00000002431	-	90	73.410	Seriola_dumerili
ENSGAFG00000016803	-	55	54.054	ENSSLDG00000003718	hnrnpa1a	79	53.939	Seriola_lalandi_dorsalis
ENSGAFG00000016803	-	63	48.585	ENSTRUG00000020491	-	54	51.685	Takifugu_rubripes
ENSGAFG00000016803	-	55	70.270	ENSTNIG00000007398	-	68	70.787	Tetraodon_nigroviridis
ENSGAFG00000016803	-	54	54.444	ENSXCOG00000009001	-	77	54.494	Xiphophorus_couchianus
ENSGAFG00000016803	-	64	52.336	ENSXMAG00000008076	-	52	54.494	Xiphophorus_maculatus