EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000016810 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 14352 bases
Position: chrNHOQ01002573.1:4085543-4099894
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000024916	RNase_T	PF00929.24	5.9e-05	1	1
ENSGAFP00000024904	RNase_T	PF00929.24	9.9e-05	1	1
ENSGAFP00000024907	RNase_T	PF00929.24	0.00012	1	1
ENSGAFP00000024900	RNase_T	PF00929.24	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000025162	-	4035	-	ENSGAFP00000024900	1137 (aa)	-	-
ENSGAFT00000025178	-	3015	-	ENSGAFP00000024916	1004 (aa)	-	-
ENSGAFT00000025169	-	3934	-	ENSGAFP00000024907	1123 (aa)	-	-
ENSGAFT00000025166	-	3783	-	ENSGAFP00000024904	1053 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000016810's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016810's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016810	-	70	75.904	ENSAPOG00000005095	zgc:152968	85	76.284	Acanthochromis_polyacanthus
ENSGAFG00000016810	-	83	77.966	ENSACIG00000002527	zgc:152968	97	76.739	Amphilophus_citrinellus
ENSGAFG00000016810	-	93	69.201	ENSAOCG00000018049	-	87	85.909	Amphiprion_ocellaris
ENSGAFG00000016810	-	91	85.909	ENSAPEG00000012559	zgc:152968	90	85.909	Amphiprion_percula
ENSGAFG00000016810	-	93	75.391	ENSACLG00000020524	-	98	79.657	Astatotilapia_calliptera
ENSGAFG00000016810	-	82	87.940	ENSCVAG00000015400	zgc:152968	99	86.139	Cyprinodon_variegatus
ENSGAFG00000016810	-	75	68.182	ENSDARG00000037002	zgc:152968	58	68.182	Danio_rerio
ENSGAFG00000016810	-	85	71.560	ENSELUG00000014272	zgc:152968	64	70.909	Esox_lucius
ENSGAFG00000016810	-	93	76.571	ENSFHEG00000003641	-	89	92.202	Fundulus_heteroclitus
ENSGAFG00000016810	-	91	73.568	ENSHBUG00000007524	-	89	73.568	Haplochromis_burtoni
ENSGAFG00000016810	-	60	64.691	ENSIPUG00000004633	zgc:152968	69	63.415	Ictalurus_punctatus
ENSGAFG00000016810	-	81	82.569	ENSLBEG00000026485	zgc:152968	89	82.569	Labrus_bergylta
ENSGAFG00000016810	-	98	47.252	ENSMAMG00000005920	-	94	47.429	Mastacembelus_armatus
ENSGAFG00000016810	-	93	75.391	ENSMZEG00005013783	-	98	78.676	Maylandia_zebra
ENSGAFG00000016810	-	82	86.111	ENSMMOG00000018072	zgc:152968	99	78.780	Mola_mola
ENSGAFG00000016810	-	84	67.692	ENSMALG00000003536	-	98	67.692	Monopterus_albus
ENSGAFG00000016810	-	93	74.609	ENSONIG00000016897	-	92	74.609	Oreochromis_niloticus
ENSGAFG00000016810	-	73	81.651	ENSORLG00020012504	-	71	81.651	Oryzias_latipes_hni
ENSGAFG00000016810	-	71	73.460	ENSOMEG00000008840	-	83	75.616	Oryzias_melastigma
ENSGAFG00000016810	-	94	96.729	ENSPFOG00000006104	-	99	93.622	Poecilia_formosa
ENSGAFG00000016810	-	94	96.729	ENSPLAG00000005034	-	98	89.952	Poecilia_latipinna
ENSGAFG00000016810	-	94	96.729	ENSPMEG00000018012	-	100	88.771	Poecilia_mexicana
ENSGAFG00000016810	-	100	86.561	ENSPREG00000007481	-	100	86.561	Poecilia_reticulata
ENSGAFG00000016810	-	54	66.818	ENSSFOG00015023869	zgc:152968	61	61.165	Scleropages_formosus
ENSGAFG00000016810	-	93	85.780	ENSSMAG00000008149	-	88	85.780	Scophthalmus_maximus
ENSGAFG00000016810	-	80	88.073	ENSSDUG00000022323	-	96	79.756	Seriola_dumerili
ENSGAFG00000016810	-	85	78.973	ENSSLDG00000018799	zgc:152968	87	88.073	Seriola_lalandi_dorsalis
ENSGAFG00000016810	-	83	85.455	ENSSPAG00000007632	-	87	85.455	Stegastes_partitus
ENSGAFG00000016810	-	98	80.734	ENSTRUG00000025441	zgc:152968	92	80.734	Takifugu_rubripes
ENSGAFG00000016810	-	100	92.021	ENSXMAG00000026483	-	100	92.021	Xiphophorus_maculatus