EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000016833 (Gene tree)
Gene ID: -
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 homolog%2C ribonucleoprotein
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 2327 bases
Position: chrNHOQ01002284.1:1079919-1082245
Accession: ZDB-GENE-040426-893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000024955	Gar1	PF04410.14	7.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000025218	-	708	-	ENSGAFP00000024955	235 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000016833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016833's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016833	gar1	65	80.263	ENSCLAG00000005335	GAR1	69	94.545	Chinchilla_lanigera
ENSGAFG00000016833	gar1	90	94.787	ENSCVAG00000002103	gar1	52	97.222	Cyprinodon_variegatus
ENSGAFG00000016833	gar1	63	78.523	ENSGMOG00000012419	gar1	58	81.679	Gadus_morhua
ENSGAFG00000016833	gar1	51	86.777	ENSLACG00000003306	GAR1	64	87.736	Latimeria_chalumnae
ENSGAFG00000016833	gar1	54	85.039	ENSMMOG00000004156	gar1	53	94.444	Mola_mola
ENSGAFG00000016833	gar1	72	76.331	ENSMODG00000005897	GAR1	82	83.444	Monodelphis_domestica
ENSGAFG00000016833	gar1	65	83.007	ENSNLEG00000016578	GAR1	50	94.393	Nomascus_leucogenys
ENSGAFG00000016833	gar1	90	96.244	ENSPFOG00000024155	gar1	51	99.074	Poecilia_formosa
ENSGAFG00000016833	gar1	90	96.244	ENSPLAG00000015056	gar1	51	99.074	Poecilia_latipinna
ENSGAFG00000016833	gar1	90	97.630	ENSPMEG00000009320	gar1	99	97.630	Poecilia_mexicana
ENSGAFG00000016833	gar1	100	95.798	ENSPREG00000010377	gar1	82	84.896	Poecilia_reticulata
ENSGAFG00000016833	gar1	52	92.623	ENSRNOG00000061146	Gar1	63	96.262	Rattus_norvegicus
ENSGAFG00000016833	gar1	68	76.730	ENSSHAG00000002161	GAR1	86	81.333	Sarcophilus_harrisii
ENSGAFG00000016833	gar1	66	80.519	ENSTRUG00000020580	gar1	52	95.370	Takifugu_rubripes
ENSGAFG00000016833	gar1	61	83.217	ENSVVUG00000017612	GAR1	55	93.458	Vulpes_vulpes
ENSGAFG00000016833	gar1	82	94.792	ENSXCOG00000014843	GAR1	82	94.792	Xiphophorus_couchianus
ENSGAFG00000016833	gar1	90	95.349	ENSXMAG00000002316	GAR1	89	95.349	Xiphophorus_maculatus