EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000016878 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 4075 bases
Position: chrNHOQ01000443.1:1638113-1642187
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000025002	PARP	PF00644.20	1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000025265	-	2171	-	ENSGAFP00000025002	617 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000016878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000016878	-	66	30.679	ENSGAFG00000021878	parp12a	68	31.320
ENSGAFG00000016878	-	69	33.259	ENSGAFG00000002709	TIPARP	64	33.259

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016878	-	88	30.769	ENSG00000163659	TIPARP	96	32.961	Homo_sapiens
ENSGAFG00000016878	-	69	32.751	ENSAPOG00000020007	TIPARP	63	33.188	Acanthochromis_polyacanthus
ENSGAFG00000016878	-	74	32.143	ENSAMEG00000003118	TIPARP	69	32.143	Ailuropoda_melanoleuca
ENSGAFG00000016878	-	69	53.811	ENSACIG00000003039	-	94	53.811	Amphilophus_citrinellus
ENSGAFG00000016878	-	69	33.183	ENSACIG00000012575	TIPARP	63	33.183	Amphilophus_citrinellus
ENSGAFG00000016878	-	65	57.882	ENSAOCG00000012493	-	100	57.882	Amphiprion_ocellaris
ENSGAFG00000016878	-	69	32.751	ENSAOCG00000003328	TIPARP	63	33.188	Amphiprion_ocellaris
ENSGAFG00000016878	-	69	32.751	ENSAPEG00000020094	TIPARP	63	33.188	Amphiprion_percula
ENSGAFG00000016878	-	84	51.606	ENSAPEG00000020727	-	100	51.606	Amphiprion_percula
ENSGAFG00000016878	-	68	33.703	ENSATEG00000002945	TIPARP	62	33.925	Anabas_testudineus
ENSGAFG00000016878	-	72	32.671	ENSAPLG00000010788	TIPARP	64	32.955	Anas_platyrhynchos
ENSGAFG00000016878	-	75	30.832	ENSACAG00000001488	TIPARP	73	30.832	Anolis_carolinensis
ENSGAFG00000016878	-	83	31.716	ENSANAG00000036588	TIPARP	79	31.716	Aotus_nancymaae
ENSGAFG00000016878	-	99	52.747	ENSACLG00000019033	-	99	53.061	Astatotilapia_calliptera
ENSGAFG00000016878	-	69	31.557	ENSACLG00000003294	TIPARP	64	33.049	Astatotilapia_calliptera
ENSGAFG00000016878	-	78	32.087	ENSBTAG00000012120	TIPARP	75	32.087	Bos_taurus
ENSGAFG00000016878	-	83	31.530	ENSCJAG00000004657	TIPARP	79	31.530	Callithrix_jacchus
ENSGAFG00000016878	-	78	31.890	ENSCAFG00000008875	TIPARP	75	31.890	Canis_familiaris
ENSGAFG00000016878	-	78	31.890	ENSCAFG00020005619	TIPARP	75	31.890	Canis_lupus_dingo
ENSGAFG00000016878	-	78	32.087	ENSCHIG00000018721	TIPARP	75	32.087	Capra_hircus
ENSGAFG00000016878	-	83	31.530	ENSTSYG00000009874	TIPARP	79	31.530	Carlito_syrichta
ENSGAFG00000016878	-	74	32.755	ENSCAPG00000014614	TIPARP	93	32.755	Cavia_aperea
ENSGAFG00000016878	-	74	32.328	ENSCPOG00000000345	TIPARP	69	32.328	Cavia_porcellus
ENSGAFG00000016878	-	83	31.716	ENSCCAG00000029051	TIPARP	79	31.716	Cebus_capucinus
ENSGAFG00000016878	-	78	32.087	ENSCATG00000030375	TIPARP	75	32.087	Cercocebus_atys
ENSGAFG00000016878	-	78	31.621	ENSCLAG00000002423	TIPARP	75	31.621	Chinchilla_lanigera
ENSGAFG00000016878	-	78	32.283	ENSCSAG00000012060	TIPARP	75	32.283	Chlorocebus_sabaeus
ENSGAFG00000016878	-	69	35.648	ENSCPBG00000022321	-	76	35.648	Chrysemys_picta_bellii
ENSGAFG00000016878	-	72	31.858	ENSCPBG00000018420	TIPARP	67	31.858	Chrysemys_picta_bellii
ENSGAFG00000016878	-	78	32.087	ENSCANG00000031967	TIPARP	75	32.087	Colobus_angolensis_palliatus
ENSGAFG00000016878	-	78	32.213	ENSCGRG00001011123	Tiparp	75	32.213	Cricetulus_griseus_chok1gshd
ENSGAFG00000016878	-	78	32.213	ENSCGRG00000002020	Tiparp	75	32.213	Cricetulus_griseus_crigri
ENSGAFG00000016878	-	99	46.166	ENSCSEG00000007641	-	100	46.166	Cynoglossus_semilaevis
ENSGAFG00000016878	-	80	30.899	ENSCSEG00000001795	TIPARP	73	31.461	Cynoglossus_semilaevis
ENSGAFG00000016878	-	69	34.812	ENSCVAG00000011906	TIPARP	66	34.812	Cyprinodon_variegatus
ENSGAFG00000016878	-	69	34.228	ENSDARG00000061841	tiparp	71	34.228	Danio_rerio
ENSGAFG00000016878	-	78	31.985	ENSDNOG00000006676	TIPARP	74	31.985	Dasypus_novemcinctus
ENSGAFG00000016878	-	74	32.903	ENSDORG00000013554	Tiparp	68	32.903	Dipodomys_ordii
ENSGAFG00000016878	-	70	35.973	ENSEBUG00000009796	TIPARP	91	35.973	Eptatretus_burgeri
ENSGAFG00000016878	-	78	32.283	ENSEASG00005012401	TIPARP	75	32.283	Equus_asinus_asinus
ENSGAFG00000016878	-	78	32.283	ENSECAG00000024048	TIPARP	74	32.283	Equus_caballus
ENSGAFG00000016878	-	74	31.545	ENSEEUG00000004395	TIPARP	69	31.545	Erinaceus_europaeus
ENSGAFG00000016878	-	69	32.500	ENSELUG00000008647	TIPARP	60	32.500	Esox_lucius
ENSGAFG00000016878	-	74	33.047	ENSFCAG00000013314	TIPARP	69	33.047	Felis_catus
ENSGAFG00000016878	-	72	31.858	ENSFALG00000004781	TIPARP	68	31.858	Ficedula_albicollis
ENSGAFG00000016878	-	78	31.423	ENSFDAG00000008747	TIPARP	75	31.423	Fukomys_damarensis
ENSGAFG00000016878	-	69	34.298	ENSFHEG00000001493	TIPARP	65	34.298	Fundulus_heteroclitus
ENSGAFG00000016878	-	56	34.247	ENSGMOG00000009093	TIPARP	98	34.247	Gadus_morhua
ENSGAFG00000016878	-	72	33.333	ENSGALG00000010256	TIPARP	67	33.333	Gallus_gallus
ENSGAFG00000016878	-	57	34.771	ENSGACG00000007095	TIPARP	99	34.771	Gasterosteus_aculeatus
ENSGAFG00000016878	-	69	36.131	ENSGAGG00000018429	-	76	36.131	Gopherus_agassizii
ENSGAFG00000016878	-	72	31.637	ENSGAGG00000012968	TIPARP	67	31.637	Gopherus_agassizii
ENSGAFG00000016878	-	88	30.769	ENSGGOG00000026270	TIPARP	87	30.769	Gorilla_gorilla
ENSGAFG00000016878	-	99	52.747	ENSHBUG00000011412	-	99	53.061	Haplochromis_burtoni
ENSGAFG00000016878	-	69	31.557	ENSHBUG00000001162	TIPARP	64	33.049	Haplochromis_burtoni
ENSGAFG00000016878	-	74	32.543	ENSHGLG00000010960	TIPARP	69	32.543	Heterocephalus_glaber_female
ENSGAFG00000016878	-	74	30.169	ENSHGLG00000016026	-	73	30.169	Heterocephalus_glaber_female
ENSGAFG00000016878	-	74	30.169	ENSHGLG00100007196	-	73	30.169	Heterocephalus_glaber_male
ENSGAFG00000016878	-	74	32.543	ENSHGLG00100012625	-	69	32.543	Heterocephalus_glaber_male
ENSGAFG00000016878	-	68	34.228	ENSHCOG00000011891	TIPARP	64	34.821	Hippocampus_comes
ENSGAFG00000016878	-	69	33.259	ENSIPUG00000015335	tiparp	69	33.259	Ictalurus_punctatus
ENSGAFG00000016878	-	78	32.087	ENSSTOG00000027682	TIPARP	73	32.087	Ictidomys_tridecemlineatus
ENSGAFG00000016878	-	83	31.903	ENSJJAG00000014369	Tiparp	79	31.903	Jaculus_jaculus
ENSGAFG00000016878	-	69	33.185	ENSKMAG00000020703	TIPARP	62	33.630	Kryptolebias_marmoratus
ENSGAFG00000016878	-	100	49.762	ENSKMAG00000011655	-	98	49.762	Kryptolebias_marmoratus
ENSGAFG00000016878	-	99	47.123	ENSLBEG00000025908	-	98	47.123	Labrus_bergylta
ENSGAFG00000016878	-	69	32.962	ENSLBEG00000011510	TIPARP	68	34.000	Labrus_bergylta
ENSGAFG00000016878	-	69	34.286	ENSLACG00000008813	-	96	34.286	Latimeria_chalumnae
ENSGAFG00000016878	-	68	42.093	ENSLACG00000018517	-	93	42.093	Latimeria_chalumnae
ENSGAFG00000016878	-	69	34.253	ENSLACG00000011215	TIPARP	65	34.253	Latimeria_chalumnae
ENSGAFG00000016878	-	68	41.514	ENSLACG00000015620	-	98	41.514	Latimeria_chalumnae
ENSGAFG00000016878	-	73	33.030	ENSLOCG00000005034	-	76	33.030	Lepisosteus_oculatus
ENSGAFG00000016878	-	69	33.871	ENSLOCG00000013687	-	99	33.871	Lepisosteus_oculatus
ENSGAFG00000016878	-	69	34.312	ENSLOCG00000003293	TIPARP	66	34.312	Lepisosteus_oculatus
ENSGAFG00000016878	-	80	45.392	ENSLOCG00000016551	-	88	45.392	Lepisosteus_oculatus
ENSGAFG00000016878	-	78	31.693	ENSLAFG00000008210	TIPARP	75	31.693	Loxodonta_africana
ENSGAFG00000016878	-	78	32.087	ENSMFAG00000040611	TIPARP	75	32.087	Macaca_fascicularis
ENSGAFG00000016878	-	78	32.087	ENSMMUG00000000366	TIPARP	75	32.087	Macaca_mulatta
ENSGAFG00000016878	-	78	32.283	ENSMNEG00000041085	TIPARP	75	32.283	Macaca_nemestrina
ENSGAFG00000016878	-	78	32.087	ENSMLEG00000043232	TIPARP	75	32.087	Mandrillus_leucophaeus
ENSGAFG00000016878	-	68	34.081	ENSMAMG00000004108	TIPARP	62	34.081	Mastacembelus_armatus
ENSGAFG00000016878	-	82	50.980	ENSMZEG00005002354	-	97	50.474	Maylandia_zebra
ENSGAFG00000016878	-	81	54.930	ENSMZEG00005002496	-	96	54.280	Maylandia_zebra
ENSGAFG00000016878	-	69	31.557	ENSMZEG00005011128	TIPARP	64	33.049	Maylandia_zebra
ENSGAFG00000016878	-	72	31.670	ENSMGAG00000010699	TIPARP	67	31.670	Meleagris_gallopavo
ENSGAFG00000016878	-	78	32.213	ENSMAUG00000013170	Tiparp	75	32.213	Mesocricetus_auratus
ENSGAFG00000016878	-	83	31.716	ENSMICG00000049557	TIPARP	79	31.716	Microcebus_murinus
ENSGAFG00000016878	-	83	31.015	ENSMOCG00000011217	Tiparp	79	31.015	Microtus_ochrogaster
ENSGAFG00000016878	-	69	33.700	ENSMMOG00000003779	TIPARP	65	34.361	Mola_mola
ENSGAFG00000016878	-	77	54.845	ENSMMOG00000000841	-	87	54.183	Mola_mola
ENSGAFG00000016878	-	69	32.237	ENSMALG00000009322	TIPARP	63	32.739	Monopterus_albus
ENSGAFG00000016878	-	69	33.638	MGP_CAROLIEiJ_G0025044	Tiparp	65	33.638	Mus_caroli
ENSGAFG00000016878	-	78	32.016	ENSMUSG00000034640	Tiparp	75	32.016	Mus_musculus
ENSGAFG00000016878	-	78	32.213	MGP_PahariEiJ_G0026487	Tiparp	75	32.213	Mus_pahari
ENSGAFG00000016878	-	78	32.016	MGP_SPRETEiJ_G0025986	Tiparp	75	32.016	Mus_spretus
ENSGAFG00000016878	-	74	32.833	ENSMPUG00000002811	TIPARP	69	32.833	Mustela_putorius_furo
ENSGAFG00000016878	-	78	32.411	ENSNGAG00000024372	Tiparp	75	32.411	Nannospalax_galili
ENSGAFG00000016878	-	88	30.769	ENSNLEG00000003977	TIPARP	87	30.769	Nomascus_leucogenys
ENSGAFG00000016878	-	74	31.983	ENSMEUG00000011326	TIPARP	71	31.983	Notamacropus_eugenii
ENSGAFG00000016878	-	74	30.968	ENSOPRG00000003961	-	69	30.968	Ochotona_princeps
ENSGAFG00000016878	-	78	31.621	ENSODEG00000003454	TIPARP	75	31.621	Octodon_degus
ENSGAFG00000016878	-	69	34.216	ENSORLG00000023309	TIPARP	63	34.216	Oryzias_latipes
ENSGAFG00000016878	-	69	33.333	ENSORLG00020012576	TIPARP	63	33.850	Oryzias_latipes_hni
ENSGAFG00000016878	-	69	33.554	ENSORLG00015020733	TIPARP	63	33.996	Oryzias_latipes_hsok
ENSGAFG00000016878	-	69	34.361	ENSOMEG00000004712	TIPARP	63	34.361	Oryzias_melastigma
ENSGAFG00000016878	-	83	31.402	ENSOGAG00000003455	TIPARP	79	31.402	Otolemur_garnettii
ENSGAFG00000016878	-	78	32.087	ENSOARG00000002923	TIPARP	75	32.087	Ovis_aries
ENSGAFG00000016878	-	88	30.769	ENSPPAG00000029528	TIPARP	87	30.769	Pan_paniscus
ENSGAFG00000016878	-	74	33.047	ENSPPRG00000017076	TIPARP	69	33.047	Panthera_pardus
ENSGAFG00000016878	-	74	33.047	ENSPTIG00000014258	TIPARP	69	33.047	Panthera_tigris_altaica
ENSGAFG00000016878	-	88	30.769	ENSPTRG00000015561	TIPARP	87	30.769	Pan_troglodytes
ENSGAFG00000016878	-	78	32.087	ENSPANG00000007235	TIPARP	75	32.087	Papio_anubis
ENSGAFG00000016878	-	98	40.354	ENSPKIG00000003548	-	99	40.354	Paramormyrops_kingsleyae
ENSGAFG00000016878	-	69	34.932	ENSPKIG00000024616	tiparp	72	33.598	Paramormyrops_kingsleyae
ENSGAFG00000016878	-	69	31.336	ENSPSIG00000010090	-	79	31.567	Pelodiscus_sinensis
ENSGAFG00000016878	-	70	35.402	ENSPSIG00000014291	-	99	35.402	Pelodiscus_sinensis
ENSGAFG00000016878	-	69	34.332	ENSPSIG00000006564	-	99	34.332	Pelodiscus_sinensis
ENSGAFG00000016878	-	69	33.793	ENSPSIG00000013221	-	99	33.793	Pelodiscus_sinensis
ENSGAFG00000016878	-	69	33.562	ENSPSIG00000017627	-	99	33.562	Pelodiscus_sinensis
ENSGAFG00000016878	-	72	32.230	ENSPSIG00000005160	TIPARP	67	32.230	Pelodiscus_sinensis
ENSGAFG00000016878	-	69	34.247	ENSPMGG00000016670	TIPARP	64	34.247	Periophthalmus_magnuspinnatus
ENSGAFG00000016878	-	78	32.213	ENSPEMG00000014866	Tiparp	75	32.213	Peromyscus_maniculatus_bairdii
ENSGAFG00000016878	-	74	31.197	ENSPCIG00000003641	TIPARP	70	31.197	Phascolarctos_cinereus
ENSGAFG00000016878	-	69	89.953	ENSPFOG00000016905	-	99	89.953	Poecilia_formosa
ENSGAFG00000016878	-	69	33.259	ENSPFOG00000008850	TIPARP	64	33.259	Poecilia_formosa
ENSGAFG00000016878	-	69	33.481	ENSPLAG00000009297	TIPARP	64	33.481	Poecilia_latipinna
ENSGAFG00000016878	-	100	81.392	ENSPLAG00000012034	-	98	81.392	Poecilia_latipinna
ENSGAFG00000016878	-	69	33.259	ENSPMEG00000002480	TIPARP	64	33.259	Poecilia_mexicana
ENSGAFG00000016878	-	100	83.657	ENSPMEG00000004973	-	98	83.657	Poecilia_mexicana
ENSGAFG00000016878	-	100	76.589	ENSPREG00000022348	-	98	76.589	Poecilia_reticulata
ENSGAFG00000016878	-	69	33.703	ENSPREG00000016895	TIPARP	64	33.703	Poecilia_reticulata
ENSGAFG00000016878	-	88	30.769	ENSPPYG00000014234	TIPARP	87	30.769	Pongo_abelii
ENSGAFG00000016878	-	57	39.437	ENSPCAG00000002482	TIPARP	81	39.437	Procavia_capensis
ENSGAFG00000016878	-	78	31.890	ENSPCOG00000018471	TIPARP	75	31.890	Propithecus_coquereli
ENSGAFG00000016878	-	78	32.157	ENSPVAG00000001903	TIPARP	75	32.157	Pteropus_vampyrus
ENSGAFG00000016878	-	69	31.557	ENSPNYG00000010697	TIPARP	62	33.049	Pundamilia_nyererei
ENSGAFG00000016878	-	63	62.295	ENSPNYG00000018003	-	89	62.295	Pundamilia_nyererei
ENSGAFG00000016878	-	69	35.056	ENSPNAG00000013979	TIPARP	71	34.685	Pygocentrus_nattereri
ENSGAFG00000016878	-	78	32.213	ENSRNOG00000011238	Tiparp	75	32.213	Rattus_norvegicus
ENSGAFG00000016878	-	75	31.687	ENSRBIG00000022299	TIPARP	71	31.687	Rhinopithecus_bieti
ENSGAFG00000016878	-	78	32.087	ENSRROG00000041667	TIPARP	75	32.087	Rhinopithecus_roxellana
ENSGAFG00000016878	-	83	31.716	ENSSBOG00000030511	TIPARP	79	31.716	Saimiri_boliviensis_boliviensis
ENSGAFG00000016878	-	74	31.034	ENSSHAG00000018924	TIPARP	69	31.034	Sarcophilus_harrisii
ENSGAFG00000016878	-	98	41.335	ENSSFOG00015022974	-	98	41.335	Scleropages_formosus
ENSGAFG00000016878	-	69	33.258	ENSSMAG00000020479	TIPARP	95	32.957	Scophthalmus_maximus
ENSGAFG00000016878	-	69	32.088	ENSSDUG00000012080	TIPARP	63	33.991	Seriola_dumerili
ENSGAFG00000016878	-	99	56.094	ENSSDUG00000018796	-	93	56.094	Seriola_dumerili
ENSGAFG00000016878	-	69	32.088	ENSSLDG00000017252	TIPARP	63	33.991	Seriola_lalandi_dorsalis
ENSGAFG00000016878	-	55	31.143	ENSSPUG00000016837	-	99	31.143	Sphenodon_punctatus
ENSGAFG00000016878	-	72	31.788	ENSSPUG00000015764	TIPARP	69	31.788	Sphenodon_punctatus
ENSGAFG00000016878	-	69	33.188	ENSSPAG00000017423	TIPARP	63	33.406	Stegastes_partitus
ENSGAFG00000016878	-	99	50.322	ENSSPAG00000008458	-	100	50.322	Stegastes_partitus
ENSGAFG00000016878	-	78	32.087	ENSSSCG00000027646	TIPARP	75	32.087	Sus_scrofa
ENSGAFG00000016878	-	72	32.009	ENSTGUG00000017448	TIPARP	70	32.009	Taeniopygia_guttata
ENSGAFG00000016878	-	69	32.450	ENSTRUG00000022644	TIPARP	72	33.113	Takifugu_rubripes
ENSGAFG00000016878	-	74	33.047	ENSTTRG00000003102	TIPARP	69	33.047	Tursiops_truncatus
ENSGAFG00000016878	-	74	32.833	ENSUAMG00000018074	TIPARP	69	32.833	Ursus_americanus
ENSGAFG00000016878	-	74	32.833	ENSUMAG00000011453	TIPARP	69	32.833	Ursus_maritimus
ENSGAFG00000016878	-	83	31.599	ENSVPAG00000008484	TIPARP	80	31.599	Vicugna_pacos
ENSGAFG00000016878	-	78	31.890	ENSVVUG00000019862	TIPARP	75	31.890	Vulpes_vulpes
ENSGAFG00000016878	-	70	32.886	ENSXETG00000012260	tiparp	64	32.886	Xenopus_tropicalis
ENSGAFG00000016878	-	69	33.703	ENSXCOG00000000447	TIPARP	64	33.703	Xiphophorus_couchianus
ENSGAFG00000016878	-	100	83.657	ENSXCOG00000013837	-	100	92.373	Xiphophorus_couchianus
ENSGAFG00000016878	-	69	33.703	ENSXMAG00000022705	TIPARP	64	33.703	Xiphophorus_maculatus
ENSGAFG00000016878	-	89	90.506	ENSXMAG00000022584	-	100	90.506	Xiphophorus_maculatus