EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000016984 (Gene tree)
Gene ID: -
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 12655 bases
Position: chrNHOQ01002739.1:2246885-2259539
Accession: 11295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000025164	MMR_HSR1	PF01926.23	2.1e-08	1	1
ENSGAFP00000025160	MMR_HSR1	PF01926.23	4.6e-08	1	1
ENSGAFP00000025159	MMR_HSR1	PF01926.23	5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000025424	SRL (1 of many)-202	4277	-	ENSGAFP00000025160	732 (aa)	-	-
ENSGAFT00000025423	SRL (1 of many)-201	4370	-	ENSGAFP00000025159	763 (aa)	-	-
ENSGAFT00000025428	SRL (1 of many)-203	1332	-	ENSGAFP00000025164	443 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000016984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016984's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000016984	SRL	90	31.658	ENSGAFG00000007267	ehd4	73	31.325
ENSGAFG00000016984	SRL	99	78.571	ENSGAFG00000000010	srl	97	78.571
ENSGAFG00000016984	SRL	91	30.542	ENSGAFG00000000730	ehd1a	76	30.569
ENSGAFG00000016984	SRL	84	32.708	ENSGAFG00000005665	ehd3	74	32.530
ENSGAFG00000016984	SRL	87	31.169	ENSGAFG00000004457	ehd2a	68	31.169

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016984	SRL	98	76.244	ENSG00000185739	SRL	99	76.279	Homo_sapiens
ENSGAFG00000016984	SRL	99	90.271	ENSAPOG00000012432	SRL	99	90.271	Acanthochromis_polyacanthus
ENSGAFG00000016984	SRL	100	77.060	ENSAPOG00000018093	srl	99	77.551	Acanthochromis_polyacanthus
ENSGAFG00000016984	SRL	98	76.018	ENSAMEG00000010862	SRL	50	76.471	Ailuropoda_melanoleuca
ENSGAFG00000016984	SRL	100	77.951	ENSACIG00000015799	srl	99	77.951	Amphilophus_citrinellus
ENSGAFG00000016984	SRL	99	90.271	ENSACIG00000015419	SRL	99	90.271	Amphilophus_citrinellus
ENSGAFG00000016984	SRL	97	77.880	ENSAOCG00000007574	srl	100	77.880	Amphiprion_ocellaris
ENSGAFG00000016984	SRL	99	88.444	ENSAOCG00000017049	SRL	98	88.641	Amphiprion_ocellaris
ENSGAFG00000016984	SRL	99	84.615	ENSAPEG00000006533	SRL	98	84.698	Amphiprion_percula
ENSGAFG00000016984	SRL	100	77.283	ENSAPEG00000006911	srl	95	77.283	Amphiprion_percula
ENSGAFG00000016984	SRL	99	85.281	ENSATEG00000009643	SRL	97	62.367	Anabas_testudineus
ENSGAFG00000016984	SRL	99	78.378	ENSATEG00000024315	srl	95	77.728	Anabas_testudineus
ENSGAFG00000016984	SRL	98	75.276	ENSACAG00000016380	SRL	85	74.459	Anolis_carolinensis
ENSGAFG00000016984	SRL	99	85.498	ENSACLG00000024674	SRL	96	66.582	Astatotilapia_calliptera
ENSGAFG00000016984	SRL	100	78.174	ENSACLG00000027685	srl	98	78.348	Astatotilapia_calliptera
ENSGAFG00000016984	SRL	99	77.455	ENSAMXG00000018789	srl	88	77.455	Astyanax_mexicanus
ENSGAFG00000016984	SRL	95	80.238	ENSAMXG00000038693	SRL	100	76.821	Astyanax_mexicanus
ENSGAFG00000016984	SRL	98	75.737	ENSBTAG00000001078	SRL	56	76.190	Bos_taurus
ENSGAFG00000016984	SRL	98	76.471	ENSCJAG00000019750	SRL	93	76.471	Callithrix_jacchus
ENSGAFG00000016984	SRL	98	76.018	ENSCAFG00000019233	SRL	82	76.018	Canis_familiaris
ENSGAFG00000016984	SRL	98	76.018	ENSCAFG00020025024	SRL	63	67.992	Canis_lupus_dingo
ENSGAFG00000016984	SRL	98	75.737	ENSCHIG00000017927	SRL	55	76.190	Capra_hircus
ENSGAFG00000016984	SRL	98	76.244	ENSTSYG00000007919	SRL	99	76.512	Carlito_syrichta
ENSGAFG00000016984	SRL	98	76.471	ENSCPOG00000012643	SRL	94	76.471	Cavia_porcellus
ENSGAFG00000016984	SRL	98	72.172	ENSCCAG00000032646	SRL	100	77.836	Cebus_capucinus
ENSGAFG00000016984	SRL	98	76.244	ENSCATG00000032227	-	93	76.244	Cercocebus_atys
ENSGAFG00000016984	SRL	98	76.471	ENSCLAG00000016242	SRL	94	76.471	Chinchilla_lanigera
ENSGAFG00000016984	SRL	86	78.961	ENSCHOG00000001618	SRL	52	79.481	Choloepus_hoffmanni
ENSGAFG00000016984	SRL	98	78.608	ENSCPBG00000026371	SRL	93	74.779	Chrysemys_picta_bellii
ENSGAFG00000016984	SRL	95	55.556	ENSCING00000005231	-	94	55.556	Ciona_intestinalis
ENSGAFG00000016984	SRL	98	76.244	ENSCANG00000035872	SRL	99	76.279	Colobus_angolensis_palliatus
ENSGAFG00000016984	SRL	98	76.190	ENSCGRG00001016630	Srl	94	77.149	Cricetulus_griseus_chok1gshd
ENSGAFG00000016984	SRL	98	76.190	ENSCGRG00000005458	Srl	94	77.149	Cricetulus_griseus_crigri
ENSGAFG00000016984	SRL	100	83.778	ENSCSEG00000011866	SRL	90	84.000	Cynoglossus_semilaevis
ENSGAFG00000016984	SRL	100	77.283	ENSCSEG00000016151	srl	96	77.283	Cynoglossus_semilaevis
ENSGAFG00000016984	SRL	99	92.576	ENSCVAG00000022465	SRL	97	78.187	Cyprinodon_variegatus
ENSGAFG00000016984	SRL	99	78.348	ENSCVAG00000003513	srl	97	78.348	Cyprinodon_variegatus
ENSGAFG00000016984	SRL	99	78.523	ENSDARG00000104587	srl	95	78.523	Danio_rerio
ENSGAFG00000016984	SRL	84	81.250	ENSDARG00000112959	CABZ01072309.1	100	81.250	Danio_rerio
ENSGAFG00000016984	SRL	98	75.792	ENSDNOG00000011643	SRL	53	76.244	Dasypus_novemcinctus
ENSGAFG00000016984	SRL	98	76.471	ENSDORG00000014807	Srl	94	76.923	Dipodomys_ordii
ENSGAFG00000016984	SRL	80	64.607	ENSEBUG00000015937	srl	90	64.607	Eptatretus_burgeri
ENSGAFG00000016984	SRL	98	76.190	ENSEASG00005000942	SRL	53	76.644	Equus_asinus_asinus
ENSGAFG00000016984	SRL	98	76.190	ENSECAG00000024219	SRL	93	76.190	Equus_caballus
ENSGAFG00000016984	SRL	98	75.877	ENSELUG00000015616	srl	94	75.877	Esox_lucius
ENSGAFG00000016984	SRL	99	79.646	ENSELUG00000022266	SRL	52	76.506	Esox_lucius
ENSGAFG00000016984	SRL	98	75.339	ENSFCAG00000022075	SRL	97	72.979	Felis_catus
ENSGAFG00000016984	SRL	98	76.364	ENSFALG00000004328	SRL	63	76.364	Ficedula_albicollis
ENSGAFG00000016984	SRL	98	76.697	ENSFDAG00000006199	SRL	94	76.697	Fukomys_damarensis
ENSGAFG00000016984	SRL	99	93.018	ENSFHEG00000011854	SRL	99	93.034	Fundulus_heteroclitus
ENSGAFG00000016984	SRL	99	78.125	ENSFHEG00000011239	srl	97	78.125	Fundulus_heteroclitus
ENSGAFG00000016984	SRL	98	76.264	ENSGMOG00000014954	srl	100	76.264	Gadus_morhua
ENSGAFG00000016984	SRL	98	76.818	ENSGALG00000038884	SRL	93	76.818	Gallus_gallus
ENSGAFG00000016984	SRL	99	76.484	ENSGACG00000011332	srl	100	76.484	Gasterosteus_aculeatus
ENSGAFG00000016984	SRL	98	76.591	ENSGAGG00000015590	SRL	51	68.008	Gopherus_agassizii
ENSGAFG00000016984	SRL	98	76.417	ENSGGOG00000011312	-	93	76.244	Gorilla_gorilla
ENSGAFG00000016984	SRL	99	85.931	ENSHBUG00000015710	SRL	96	66.877	Haplochromis_burtoni
ENSGAFG00000016984	SRL	100	78.174	ENSHBUG00000007581	srl	98	78.348	Haplochromis_burtoni
ENSGAFG00000016984	SRL	98	76.471	ENSHGLG00000015271	SRL	94	76.471	Heterocephalus_glaber_female
ENSGAFG00000016984	SRL	98	76.471	ENSHGLG00100019378	SRL	94	76.471	Heterocephalus_glaber_male
ENSGAFG00000016984	SRL	100	77.506	ENSHCOG00000008687	srl	99	77.506	Hippocampus_comes
ENSGAFG00000016984	SRL	99	84.430	ENSHCOG00000001012	SRL	69	72.556	Hippocampus_comes
ENSGAFG00000016984	SRL	100	76.169	ENSIPUG00000012513	srl	96	76.169	Ictalurus_punctatus
ENSGAFG00000016984	SRL	98	70.524	ENSIPUG00000011609	SRL	100	71.397	Ictalurus_punctatus
ENSGAFG00000016984	SRL	98	76.871	ENSSTOG00000021151	-	94	76.697	Ictidomys_tridecemlineatus
ENSGAFG00000016984	SRL	98	76.018	ENSJJAG00000016400	Srl	94	77.149	Jaculus_jaculus
ENSGAFG00000016984	SRL	98	78.753	ENSKMAG00000014115	srl	99	76.000	Kryptolebias_marmoratus
ENSGAFG00000016984	SRL	98	91.724	ENSKMAG00000019537	SRL	100	91.724	Kryptolebias_marmoratus
ENSGAFG00000016984	SRL	99	86.192	ENSLBEG00000013811	SRL	98	86.207	Labrus_bergylta
ENSGAFG00000016984	SRL	99	78.202	ENSLBEG00000026643	srl	94	78.202	Labrus_bergylta
ENSGAFG00000016984	SRL	98	74.887	ENSLACG00000002825	SRL	98	74.887	Latimeria_chalumnae
ENSGAFG00000016984	SRL	98	78.054	ENSLOCG00000002644	srl	94	78.054	Lepisosteus_oculatus
ENSGAFG00000016984	SRL	98	76.190	ENSLAFG00000006329	SRL	50	76.471	Loxodonta_africana
ENSGAFG00000016984	SRL	96	76.279	ENSMFAG00000037383	SRL	99	76.279	Macaca_fascicularis
ENSGAFG00000016984	SRL	98	76.244	ENSMNEG00000019236	-	93	76.244	Macaca_nemestrina
ENSGAFG00000016984	SRL	98	70.136	ENSMLEG00000032156	SRL	93	70.136	Mandrillus_leucophaeus
ENSGAFG00000016984	SRL	99	85.217	ENSMAMG00000013756	SRL	96	63.120	Mastacembelus_armatus
ENSGAFG00000016984	SRL	99	77.928	ENSMAMG00000023322	srl	95	77.283	Mastacembelus_armatus
ENSGAFG00000016984	SRL	100	78.174	ENSMZEG00005004548	srl	98	78.348	Maylandia_zebra
ENSGAFG00000016984	SRL	99	85.714	ENSMZEG00005004010	SRL	97	66.709	Maylandia_zebra
ENSGAFG00000016984	SRL	98	76.818	ENSMGAG00000009342	SRL	92	81.096	Meleagris_gallopavo
ENSGAFG00000016984	SRL	98	76.697	ENSMICG00000032307	SRL	93	76.697	Microcebus_murinus
ENSGAFG00000016984	SRL	98	75.566	ENSMOCG00000008208	Srl	94	76.697	Microtus_ochrogaster
ENSGAFG00000016984	SRL	98	84.749	ENSMMOG00000021572	SRL	99	85.043	Mola_mola
ENSGAFG00000016984	SRL	99	77.928	ENSMMOG00000013970	srl	99	77.928	Mola_mola
ENSGAFG00000016984	SRL	98	78.231	ENSMODG00000016380	-	50	78.231	Monodelphis_domestica
ENSGAFG00000016984	SRL	93	88.620	ENSMALG00000000670	SRL	98	88.620	Monopterus_albus
ENSGAFG00000016984	SRL	100	76.837	ENSMALG00000005039	srl	99	76.837	Monopterus_albus
ENSGAFG00000016984	SRL	98	77.551	MGP_CAROLIEiJ_G0020400	Srl	94	77.376	Mus_caroli
ENSGAFG00000016984	SRL	98	77.551	ENSMUSG00000022519	Srl	94	77.376	Mus_musculus
ENSGAFG00000016984	SRL	98	77.376	MGP_SPRETEiJ_G0021294	Srl	94	77.376	Mus_spretus
ENSGAFG00000016984	SRL	98	76.018	ENSMPUG00000015025	SRL	54	76.471	Mustela_putorius_furo
ENSGAFG00000016984	SRL	98	76.471	ENSMLUG00000030733	SRL	56	76.923	Myotis_lucifugus
ENSGAFG00000016984	SRL	98	76.244	ENSNGAG00000019741	Srl	94	77.376	Nannospalax_galili
ENSGAFG00000016984	SRL	99	85.065	ENSNBRG00000002422	SRL	96	65.752	Neolamprologus_brichardi
ENSGAFG00000016984	SRL	100	78.174	ENSNBRG00000023775	srl	96	78.174	Neolamprologus_brichardi
ENSGAFG00000016984	SRL	98	71.493	ENSNLEG00000029051	SRL	93	71.493	Nomascus_leucogenys
ENSGAFG00000016984	SRL	98	71.041	ENSOPRG00000000477	-	52	71.493	Ochotona_princeps
ENSGAFG00000016984	SRL	98	77.149	ENSODEG00000013256	SRL	94	77.149	Octodon_degus
ENSGAFG00000016984	SRL	100	77.951	ENSONIG00000005192	srl	95	77.951	Oreochromis_niloticus
ENSGAFG00000016984	SRL	99	78.378	ENSORLG00000008291	srl	93	79.442	Oryzias_latipes
ENSGAFG00000016984	SRL	99	89.414	ENSORLG00000015064	SRL	98	89.414	Oryzias_latipes
ENSGAFG00000016984	SRL	99	78.604	ENSORLG00020019784	srl	81	79.695	Oryzias_latipes_hni
ENSGAFG00000016984	SRL	99	89.640	ENSORLG00020018173	SRL	98	89.640	Oryzias_latipes_hni
ENSGAFG00000016984	SRL	99	78.378	ENSORLG00015009342	srl	91	78.378	Oryzias_latipes_hsok
ENSGAFG00000016984	SRL	99	89.865	ENSORLG00015019063	SRL	98	89.865	Oryzias_latipes_hsok
ENSGAFG00000016984	SRL	99	78.829	ENSOMEG00000010006	srl	98	78.864	Oryzias_melastigma
ENSGAFG00000016984	SRL	99	86.768	ENSOMEG00000005682	SRL	65	89.195	Oryzias_melastigma
ENSGAFG00000016984	SRL	98	75.792	ENSOGAG00000029266	SRL	54	76.244	Otolemur_garnettii
ENSGAFG00000016984	SRL	98	75.737	ENSOARG00000003074	SRL	55	76.190	Ovis_aries
ENSGAFG00000016984	SRL	98	76.244	ENSPPAG00000024919	-	99	76.279	Pan_paniscus
ENSGAFG00000016984	SRL	98	75.339	ENSPPRG00000010274	SRL	99	76.744	Panthera_pardus
ENSGAFG00000016984	SRL	98	75.339	ENSPTIG00000015162	SRL	99	76.744	Panthera_tigris_altaica
ENSGAFG00000016984	SRL	98	76.244	ENSPTRG00000007712	SRL	99	76.279	Pan_troglodytes
ENSGAFG00000016984	SRL	98	76.244	ENSPANG00000013804	SRL	95	76.244	Papio_anubis
ENSGAFG00000016984	SRL	99	76.126	ENSPKIG00000024974	SRL	91	73.348	Paramormyrops_kingsleyae
ENSGAFG00000016984	SRL	99	79.018	ENSPKIG00000006405	srl	95	79.018	Paramormyrops_kingsleyae
ENSGAFG00000016984	SRL	98	78.733	ENSPMGG00000021081	srl	95	78.733	Periophthalmus_magnuspinnatus
ENSGAFG00000016984	SRL	98	86.927	ENSPMGG00000023505	-	99	86.927	Periophthalmus_magnuspinnatus
ENSGAFG00000016984	SRL	98	75.792	ENSPEMG00000015842	Srl	94	76.923	Peromyscus_maniculatus_bairdii
ENSGAFG00000016984	SRL	93	64.679	ENSPMAG00000004786	srl	99	64.679	Petromyzon_marinus
ENSGAFG00000016984	SRL	98	77.551	ENSPCIG00000012128	SRL	96	77.551	Phascolarctos_cinereus
ENSGAFG00000016984	SRL	99	76.957	ENSPFOG00000011408	srl	95	76.957	Poecilia_formosa
ENSGAFG00000016984	SRL	99	78.795	ENSPLAG00000008017	srl	97	78.795	Poecilia_latipinna
ENSGAFG00000016984	SRL	100	97.534	ENSPLAG00000002932	SRL	100	97.534	Poecilia_latipinna
ENSGAFG00000016984	SRL	100	94.626	ENSPMEG00000005890	SRL	99	94.495	Poecilia_mexicana
ENSGAFG00000016984	SRL	99	78.795	ENSPMEG00000006745	srl	97	78.795	Poecilia_mexicana
ENSGAFG00000016984	SRL	99	78.571	ENSPREG00000007751	srl	99	78.571	Poecilia_reticulata
ENSGAFG00000016984	SRL	100	97.982	ENSPREG00000000315	SRL	100	97.982	Poecilia_reticulata
ENSGAFG00000016984	SRL	96	75.814	ENSPPYG00000007053	SRL	100	75.814	Pongo_abelii
ENSGAFG00000016984	SRL	98	75.391	ENSPCAG00000003378	-	50	76.871	Procavia_capensis
ENSGAFG00000016984	SRL	98	76.244	ENSPCOG00000023135	SRL	99	76.995	Propithecus_coquereli
ENSGAFG00000016984	SRL	98	76.697	ENSPVAG00000006586	SRL	54	77.149	Pteropus_vampyrus
ENSGAFG00000016984	SRL	99	85.714	ENSPNYG00000003423	SRL	96	66.751	Pundamilia_nyererei
ENSGAFG00000016984	SRL	100	78.174	ENSPNYG00000001200	srl	98	78.348	Pundamilia_nyererei
ENSGAFG00000016984	SRL	99	80.045	ENSPNAG00000007361	-	92	80.045	Pygocentrus_nattereri
ENSGAFG00000016984	SRL	100	76.615	ENSPNAG00000023106	srl	96	76.615	Pygocentrus_nattereri
ENSGAFG00000016984	SRL	98	76.417	ENSRBIG00000042358	SRL	52	68.980	Rhinopithecus_bieti
ENSGAFG00000016984	SRL	98	76.644	ENSSBOG00000029273	SRL	93	76.471	Saimiri_boliviensis_boliviensis
ENSGAFG00000016984	SRL	99	75.901	ENSSFOG00015021327	SRL	50	75.615	Scleropages_formosus
ENSGAFG00000016984	SRL	99	78.153	ENSSFOG00015009773	srl	96	77.506	Scleropages_formosus
ENSGAFG00000016984	SRL	99	77.803	ENSSMAG00000016274	srl	98	77.679	Scophthalmus_maximus
ENSGAFG00000016984	SRL	100	84.267	ENSSMAG00000002232	SRL	97	59.910	Scophthalmus_maximus
ENSGAFG00000016984	SRL	99	78.700	ENSSDUG00000010808	srl	98	78.700	Seriola_dumerili
ENSGAFG00000016984	SRL	100	88.222	ENSSDUG00000009161	SRL	100	88.222	Seriola_dumerili
ENSGAFG00000016984	SRL	98	87.061	ENSSLDG00000014601	SRL	99	90.989	Seriola_lalandi_dorsalis
ENSGAFG00000016984	SRL	100	78.396	ENSSLDG00000022024	srl	97	78.571	Seriola_lalandi_dorsalis
ENSGAFG00000016984	SRL	99	75.225	ENSSPUG00000016859	SRL	98	75.225	Sphenodon_punctatus
ENSGAFG00000016984	SRL	99	89.367	ENSSPAG00000014254	SRL	99	89.367	Stegastes_partitus
ENSGAFG00000016984	SRL	98	78.281	ENSSPAG00000019105	srl	94	78.281	Stegastes_partitus
ENSGAFG00000016984	SRL	98	76.190	ENSSSCG00000007949	SRL	98	76.190	Sus_scrofa
ENSGAFG00000016984	SRL	80	81.461	ENSTGUG00000016121	-	98	81.461	Taeniopygia_guttata
ENSGAFG00000016984	SRL	98	76.591	ENSTGUG00000003951	-	97	76.591	Taeniopygia_guttata
ENSGAFG00000016984	SRL	93	86.957	ENSTRUG00000013310	SRL	97	59.085	Takifugu_rubripes
ENSGAFG00000016984	SRL	100	77.506	ENSTRUG00000006005	srl	96	77.506	Takifugu_rubripes
ENSGAFG00000016984	SRL	100	77.283	ENSTNIG00000009739	srl	96	77.283	Tetraodon_nigroviridis
ENSGAFG00000016984	SRL	98	76.018	ENSUAMG00000005701	SRL	55	76.471	Ursus_americanus
ENSGAFG00000016984	SRL	98	76.018	ENSUMAG00000002574	SRL	55	76.471	Ursus_maritimus
ENSGAFG00000016984	SRL	98	76.018	ENSVVUG00000016331	-	57	67.736	Vulpes_vulpes
ENSGAFG00000016984	SRL	98	76.471	ENSXETG00000017313	srl	98	76.471	Xenopus_tropicalis
ENSGAFG00000016984	SRL	94	79.669	ENSXCOG00000010424	srl	97	79.669	Xiphophorus_couchianus
ENSGAFG00000016984	SRL	100	99.323	ENSXCOG00000014584	SRL	99	99.323	Xiphophorus_couchianus
ENSGAFG00000016984	SRL	100	97.248	ENSXMAG00000027598	SRL	100	97.411	Xiphophorus_maculatus
ENSGAFG00000016984	SRL	99	78.571	ENSXMAG00000004625	srl	91	78.571	Xiphophorus_maculatus