EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAFG00000017099 (Gene tree)
Gene ID
-
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Gambusia_affinis
Status
putative
Strand
Plus strand
Length
10179 bases
Position
chrNHOQ01001369.1:288008-298186
Accession
ZDB-GENE-040426-2401
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAFP00000025313RRM_1PF00076.222.3e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAFT00000025579-1636-ENSGAFP00000025313234 (aa)--
Gene Model
Click here to download ENSGAFG00000017099's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000017099's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAFG00000017099pabpn16361.438ENSGAFG00000012565PABPN1L5962.581
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAFG00000017099pabpn18682.126ENSG00000100836PABPN19481.657Homo_sapiens
ENSGAFG00000017099pabpn19972.222ENSG00000258643BCL2L2-PABPN17072.222Homo_sapiens
ENSGAFG00000017099pabpn110097.436ENSAPOG00000016425pabpn110097.436Acanthochromis_polyacanthus
ENSGAFG00000017099pabpn18183.770ENSAMEG00000007048BCL2L2-PABPN110083.770Ailuropoda_melanoleuca
ENSGAFG00000017099pabpn19495.964ENSACIG00000021744pabpn110097.753Amphilophus_citrinellus
ENSGAFG00000017099pabpn110097.436ENSAOCG00000015805pabpn110097.436Amphiprion_ocellaris
ENSGAFG00000017099pabpn110097.436ENSAPEG00000009623pabpn110097.436Amphiprion_percula
ENSGAFG00000017099pabpn110097.863ENSATEG00000020531pabpn110097.863Anabas_testudineus
ENSGAFG00000017099pabpn18185.864ENSACAG00000006185-8173.029Anolis_carolinensis
ENSGAFG00000017099pabpn19968.421ENSANAG00000024513-8475.309Aotus_nancymaae
ENSGAFG00000017099pabpn19495.536ENSACLG00000016374pabpn17795.536Astatotilapia_calliptera
ENSGAFG00000017099pabpn110097.021ENSAMXG00000000452pabpn110097.021Astyanax_mexicanus
ENSGAFG00000017099pabpn18282.902ENSBTAG00000053753-7182.902Bos_taurus
ENSGAFG00000017099pabpn18483.417ENSBTAG00000006884PABPN18669.057Bos_taurus
ENSGAFG00000017099pabpn18475.758ENSBTAG00000050594-7474.286Bos_taurus
ENSGAFG00000017099pabpn16158.904WBGene00003904pabp-27158.904Caenorhabditis_elegans
ENSGAFG00000017099pabpn17179.882ENSCJAG00000004407-8479.882Callithrix_jacchus
ENSGAFG00000017099pabpn19975.641ENSCJAG00000007960-8476.068Callithrix_jacchus
ENSGAFG00000017099pabpn18682.126ENSCAFG00000011482PABPN18670.566Canis_familiaris
ENSGAFG00000017099pabpn18682.126ENSCAFG00020007298-8670.189Canis_lupus_dingo
ENSGAFG00000017099pabpn18682.126ENSCAFG00020006651-8670.189Canis_lupus_dingo
ENSGAFG00000017099pabpn18682.126ENSCHIG00000012184PABPN18670.189Capra_hircus
ENSGAFG00000017099pabpn19972.222ENSTSYG00000033996BCL2L2-PABPN19481.657Carlito_syrichta
ENSGAFG00000017099pabpn16081.429ENSCAPG00000009461-9184.496Cavia_aperea
ENSGAFG00000017099pabpn18681.643ENSCPOG00000025574PABPN16881.429Cavia_porcellus
ENSGAFG00000017099pabpn19975.641ENSCCAG00000033954BCL2L2-PABPN18476.068Cebus_capucinus
ENSGAFG00000017099pabpn19975.641ENSCATG00000038536BCL2L2-PABPN18476.068Cercocebus_atys
ENSGAFG00000017099pabpn16581.579ENSCLAG00000012423PABPN15681.579Chinchilla_lanigera
ENSGAFG00000017099pabpn18680.676ENSCSAG00000016036PABPN16880.476Chlorocebus_sabaeus
ENSGAFG00000017099pabpn18972.512ENSCHOG00000004798BCL2L2-PABPN19270.588Choloepus_hoffmanni
ENSGAFG00000017099pabpn17184.024ENSCPBG00000026060-9484.024Chrysemys_picta_bellii
ENSGAFG00000017099pabpn19061.033ENSCING00000012468-8961.033Ciona_intestinalis
ENSGAFG00000017099pabpn17662.222ENSCSAVG00000002001-9360.355Ciona_savignyi
ENSGAFG00000017099pabpn19972.222ENSCANG00000009750BCL2L2-PABPN19481.657Colobus_angolensis_palliatus
ENSGAFG00000017099pabpn18570.854ENSCANG00000030980-8764.017Colobus_angolensis_palliatus
ENSGAFG00000017099pabpn18681.643ENSCGRG00001019696Pabpn19481.065Cricetulus_griseus_chok1gshd
ENSGAFG00000017099pabpn16290.476ENSCGRG00000011102Pabpn19091.034Cricetulus_griseus_crigri
ENSGAFG00000017099pabpn110096.581ENSCSEG00000008774pabpn110096.581Cynoglossus_semilaevis
ENSGAFG00000017099pabpn110096.581ENSCVAG00000003152pabpn110096.581Cyprinodon_variegatus
ENSGAFG00000017099pabpn110096.154ENSDARG00000045373pabpn110096.154Danio_rerio
ENSGAFG00000017099pabpn18452.551ENSDARG00000087996pabpn1l7267.521Danio_rerio
ENSGAFG00000017099pabpn18682.126ENSDNOG00000023682PABPN18670.189Dasypus_novemcinctus
ENSGAFG00000017099pabpn15682.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSGAFG00000017099pabpn18681.159ENSDORG00000028966-8669.434Dipodomys_ordii
ENSGAFG00000017099pabpn19758.547FBgn0005648Pabp28262.703Drosophila_melanogaster
ENSGAFG00000017099pabpn19972.766ENSEBUG00000002322pabpn19972.961Eptatretus_burgeri
ENSGAFG00000017099pabpn18682.126ENSEASG00005011716PABPN18670.189Equus_asinus_asinus
ENSGAFG00000017099pabpn18581.463ENSECAG00000011652PABPN18170.370Equus_caballus
ENSGAFG00000017099pabpn18679.710ENSEEUG00000012973-7175.714Erinaceus_europaeus
ENSGAFG00000017099pabpn110093.697ENSELUG00000022654pabpn110093.697Esox_lucius
ENSGAFG00000017099pabpn18682.126ENSFCAG00000031922PABPN18670.189Felis_catus
ENSGAFG00000017099pabpn17181.657ENSFDAG00000018381BCL2L2-PABPN19481.657Fukomys_damarensis
ENSGAFG00000017099pabpn110096.154ENSFHEG00000007215pabpn110096.154Fundulus_heteroclitus
ENSGAFG00000017099pabpn19592.793ENSGMOG00000003922pabpn17594.393Gadus_morhua
ENSGAFG00000017099pabpn18382.828ENSGALG00000052930-6183.412Gallus_gallus
ENSGAFG00000017099pabpn110092.308ENSGACG00000002167pabpn110092.308Gasterosteus_aculeatus
ENSGAFG00000017099pabpn19975.641ENSGGOG00000022683-8476.068Gorilla_gorilla
ENSGAFG00000017099pabpn19465.532ENSGGOG00000025919-9868.000Gorilla_gorilla
ENSGAFG00000017099pabpn18969.378ENSGGOG00000039675-9165.560Gorilla_gorilla
ENSGAFG00000017099pabpn110097.863ENSHBUG00000019523pabpn110097.863Haplochromis_burtoni
ENSGAFG00000017099pabpn18681.643ENSHGLG00000002927-9191.034Heterocephalus_glaber_female
ENSGAFG00000017099pabpn18769.378ENSHGLG00000018588-7069.378Heterocephalus_glaber_female
ENSGAFG00000017099pabpn17162.722ENSHGLG00000009842-9362.722Heterocephalus_glaber_female
ENSGAFG00000017099pabpn19471.171ENSHGLG00100006673-9191.034Heterocephalus_glaber_male
ENSGAFG00000017099pabpn18769.378ENSHGLG00100015565-8762.000Heterocephalus_glaber_male
ENSGAFG00000017099pabpn17168.391ENSHGLG00100018935-9472.674Heterocephalus_glaber_male
ENSGAFG00000017099pabpn110096.581ENSHCOG00000004655pabpn110096.581Hippocampus_comes
ENSGAFG00000017099pabpn110088.034ENSIPUG00000000180-9988.034Ictalurus_punctatus
ENSGAFG00000017099pabpn110095.726ENSIPUG00000008085PABPN110095.726Ictalurus_punctatus
ENSGAFG00000017099pabpn17181.657ENSSTOG00000029847BCL2L2-PABPN19481.657Ictidomys_tridecemlineatus
ENSGAFG00000017099pabpn17181.657ENSJJAG00000023507Gm205219481.657Jaculus_jaculus
ENSGAFG00000017099pabpn110097.872ENSKMAG00000018748pabpn110097.872Kryptolebias_marmoratus
ENSGAFG00000017099pabpn110097.863ENSLBEG00000027266pabpn110097.863Labrus_bergylta
ENSGAFG00000017099pabpn17685.000ENSLACG00000000646pabpn19176.056Latimeria_chalumnae
ENSGAFG00000017099pabpn19066.512ENSLOCG00000004694pabpn1l9965.581Lepisosteus_oculatus
ENSGAFG00000017099pabpn19593.722ENSLOCG00000000796pabpn17790.698Lepisosteus_oculatus
ENSGAFG00000017099pabpn16582.237ENSLAFG00000031227-10081.699Loxodonta_africana
ENSGAFG00000017099pabpn19972.222ENSMFAG00000032183BCL2L2-PABPN19481.657Macaca_fascicularis
ENSGAFG00000017099pabpn16174.126ENSMFAG00000031355-9974.126Macaca_fascicularis
ENSGAFG00000017099pabpn19972.222ENSMMUG00000014747BCL2L2-PABPN110081.757Macaca_mulatta
ENSGAFG00000017099pabpn18667.961ENSMMUG00000048382-6967.619Macaca_mulatta
ENSGAFG00000017099pabpn19975.641ENSMNEG00000045065BCL2L2-PABPN18476.068Macaca_nemestrina
ENSGAFG00000017099pabpn17968.617ENSMNEG00000035750-9974.126Macaca_nemestrina
ENSGAFG00000017099pabpn19972.222ENSMLEG00000043862BCL2L2-PABPN19481.657Mandrillus_leucophaeus
ENSGAFG00000017099pabpn17266.071ENSMLEG00000034623-9971.528Mandrillus_leucophaeus
ENSGAFG00000017099pabpn19996.537ENSMAMG00000007979pabpn17996.537Mastacembelus_armatus
ENSGAFG00000017099pabpn19597.748ENSMZEG00005011904pabpn17797.748Maylandia_zebra
ENSGAFG00000017099pabpn19972.222ENSMAUG00000007383Gm205218770.342Mesocricetus_auratus
ENSGAFG00000017099pabpn19976.170ENSMICG00000010002BCL2L2-PABPN18476.793Microcebus_murinus
ENSGAFG00000017099pabpn19971.795ENSMOCG00000018557Gm205218891.034Microtus_ochrogaster
ENSGAFG00000017099pabpn110098.291ENSMMOG00000005405pabpn110098.291Mola_mola
ENSGAFG00000017099pabpn18578.431ENSMODG00000004535-7969.547Monodelphis_domestica
ENSGAFG00000017099pabpn19996.970ENSMALG00000019612pabpn17896.970Monopterus_albus
ENSGAFG00000017099pabpn18681.159MGP_CAROLIEiJ_G0019277Pabpn18891.034Mus_caroli
ENSGAFG00000017099pabpn19971.795MGP_CAROLIEiJ_G0019276Gm205217071.795Mus_caroli
ENSGAFG00000017099pabpn19972.222ENSMUSG00000092232Gm205217072.222Mus_musculus
ENSGAFG00000017099pabpn18681.643ENSMUSG00000022194Pabpn18891.034Mus_musculus
ENSGAFG00000017099pabpn18681.643MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSGAFG00000017099pabpn19972.222MGP_PahariEiJ_G0030294Gm205217072.222Mus_pahari
ENSGAFG00000017099pabpn18681.643MGP_SPRETEiJ_G0020166Pabpn18891.034Mus_spretus
ENSGAFG00000017099pabpn19972.222MGP_SPRETEiJ_G0020165Gm205217072.222Mus_spretus
ENSGAFG00000017099pabpn16681.529ENSMPUG00000006775-8783.673Mustela_putorius_furo
ENSGAFG00000017099pabpn18182.723ENSMLUG00000003800-10082.723Myotis_lucifugus
ENSGAFG00000017099pabpn18480.905ENSMLUG00000028677-8572.996Myotis_lucifugus
ENSGAFG00000017099pabpn18879.147ENSMLUG00000012452-6979.147Myotis_lucifugus
ENSGAFG00000017099pabpn19972.650ENSNGAG00000019529Gm205217072.650Nannospalax_galili
ENSGAFG00000017099pabpn19597.748ENSNBRG00000023955pabpn110097.753Neolamprologus_brichardi
ENSGAFG00000017099pabpn16459.333ENSNLEG00000035292-9959.333Nomascus_leucogenys
ENSGAFG00000017099pabpn19972.222ENSNLEG00000015007-7481.905Nomascus_leucogenys
ENSGAFG00000017099pabpn18668.599ENSNLEG00000030598-7768.571Nomascus_leucogenys
ENSGAFG00000017099pabpn19971.795ENSODEG00000002083BCL2L2-PABPN16881.429Octodon_degus
ENSGAFG00000017099pabpn17672.222ENSODEG00000011555-8971.006Octodon_degus
ENSGAFG00000017099pabpn18673.171ENSODEG00000003739-8864.062Octodon_degus
ENSGAFG00000017099pabpn19597.748ENSONIG00000008112pabpn17797.748Oreochromis_niloticus
ENSGAFG00000017099pabpn16383.108ENSOANG00000009218-10083.108Ornithorhynchus_anatinus
ENSGAFG00000017099pabpn18681.643ENSOCUG00000016174PABPN19570.076Oryctolagus_cuniculus
ENSGAFG00000017099pabpn19997.835ENSORLG00000027900pabpn19894.828Oryzias_latipes
ENSGAFG00000017099pabpn19997.835ENSORLG00020004681pabpn17897.835Oryzias_latipes_hni
ENSGAFG00000017099pabpn110098.291ENSORLG00015000018pabpn110098.291Oryzias_latipes_hsok
ENSGAFG00000017099pabpn19597.748ENSOMEG00000016618pabpn18297.738Oryzias_melastigma
ENSGAFG00000017099pabpn18682.126ENSOGAG00000008710PABPN18670.189Otolemur_garnettii
ENSGAFG00000017099pabpn19972.222ENSOARG00000019336BCL2L2-PABPN16472.222Ovis_aries
ENSGAFG00000017099pabpn19972.222ENSPPAG00000028984BCL2L2-PABPN18783.673Pan_paniscus
ENSGAFG00000017099pabpn17167.066ENSPPAG00000039421-9367.066Pan_paniscus
ENSGAFG00000017099pabpn18682.126ENSPPRG00000010567PABPN18670.189Panthera_pardus
ENSGAFG00000017099pabpn17181.657ENSPTIG00000001063BCL2L2-PABPN19481.657Panthera_tigris_altaica
ENSGAFG00000017099pabpn110062.979ENSPTRG00000047273-9360.474Pan_troglodytes
ENSGAFG00000017099pabpn19975.641ENSPTRG00000006167BCL2L28476.068Pan_troglodytes
ENSGAFG00000017099pabpn19975.641ENSPANG00000021100BCL2L2-PABPN18476.068Papio_anubis
ENSGAFG00000017099pabpn18469.347ENSPANG00000023326-9974.825Papio_anubis
ENSGAFG00000017099pabpn110091.880ENSPKIG00000018052pabpn110093.590Paramormyrops_kingsleyae
ENSGAFG00000017099pabpn19993.939ENSPKIG00000008144-7892.641Paramormyrops_kingsleyae
ENSGAFG00000017099pabpn16970.807ENSPKIG00000008340pabpn1l7471.812Paramormyrops_kingsleyae
ENSGAFG00000017099pabpn15875.000ENSPSIG00000011959-7885.047Pelodiscus_sinensis
ENSGAFG00000017099pabpn19597.297ENSPMGG00000022027pabpn18197.297Periophthalmus_magnuspinnatus
ENSGAFG00000017099pabpn19972.222ENSPEMG00000008332Gm205218891.034Peromyscus_maniculatus_bairdii
ENSGAFG00000017099pabpn17875.269ENSPMAG00000006212pabpn17775.789Petromyzon_marinus
ENSGAFG00000017099pabpn18679.227ENSPCIG00000027751-8669.434Phascolarctos_cinereus
ENSGAFG00000017099pabpn110098.718ENSPFOG00000010351pabpn19998.718Poecilia_formosa
ENSGAFG00000017099pabpn19999.134ENSPLAG00000022696pabpn17999.134Poecilia_latipinna
ENSGAFG00000017099pabpn110098.718ENSPMEG00000020856pabpn110098.718Poecilia_mexicana
ENSGAFG00000017099pabpn110099.145ENSPREG00000011278pabpn110099.145Poecilia_reticulata
ENSGAFG00000017099pabpn18182.051ENSPPYG00000005663PABPN18670.370Pongo_abelii
ENSGAFG00000017099pabpn17968.912ENSPCAG00000005902PABPN18259.184Procavia_capensis
ENSGAFG00000017099pabpn19976.170ENSPCOG00000028047BCL2L2-PABPN18476.793Propithecus_coquereli
ENSGAFG00000017099pabpn18880.476ENSPVAG00000005270PABPN18668.939Pteropus_vampyrus
ENSGAFG00000017099pabpn110097.863ENSPNYG00000013182pabpn110097.863Pundamilia_nyererei
ENSGAFG00000017099pabpn110097.009ENSPNAG00000023526pabpn110097.009Pygocentrus_nattereri
ENSGAFG00000017099pabpn18862.201ENSPNAG00000021666pabpn1l7871.069Pygocentrus_nattereri
ENSGAFG00000017099pabpn18681.643ENSRNOG00000042195Pabpn18570.342Rattus_norvegicus
ENSGAFG00000017099pabpn19471.622ENSRBIG00000040762BCL2L2-PABPN16572.642Rhinopithecus_bieti
ENSGAFG00000017099pabpn18870.952ENSRBIG00000042811-9567.105Rhinopithecus_bieti
ENSGAFG00000017099pabpn18971.362ENSRBIG00000039547-8266.222Rhinopithecus_bieti
ENSGAFG00000017099pabpn19466.667ENSRROG00000040409-8266.667Rhinopithecus_roxellana
ENSGAFG00000017099pabpn19471.622ENSRROG00000045535BCL2L2-PABPN19481.657Rhinopithecus_roxellana
ENSGAFG00000017099pabpn18867.136ENSRROG00000036409-7063.913Rhinopithecus_roxellana
ENSGAFG00000017099pabpn19968.421ENSSBOG00000026930BCL2L2-PABPN18783.673Saimiri_boliviensis_boliviensis
ENSGAFG00000017099pabpn18182.723ENSSHAG00000014841-8782.723Sarcophilus_harrisii
ENSGAFG00000017099pabpn19961.250ENSSHAG00000007707-9957.500Sarcophilus_harrisii
ENSGAFG00000017099pabpn110088.511ENSSFOG00015012565pabpn110087.234Scleropages_formosus
ENSGAFG00000017099pabpn16173.944ENSSFOG00015015833pabpn1l6873.288Scleropages_formosus
ENSGAFG00000017099pabpn110095.726ENSSFOG00015014718pabpn110095.726Scleropages_formosus
ENSGAFG00000017099pabpn110097.436ENSSMAG00000020157pabpn110097.436Scophthalmus_maximus
ENSGAFG00000017099pabpn19997.403ENSSDUG00000020582pabpn17897.403Seriola_dumerili
ENSGAFG00000017099pabpn110097.863ENSSLDG00000007118pabpn110097.863Seriola_lalandi_dorsalis
ENSGAFG00000017099pabpn17184.615ENSSPUG00000018308-9484.615Sphenodon_punctatus
ENSGAFG00000017099pabpn110097.021ENSSPAG00000021658pabpn110097.021Stegastes_partitus
ENSGAFG00000017099pabpn19262.557ENSSSCG00000034805-7958.216Sus_scrofa
ENSGAFG00000017099pabpn19972.222ENSSSCG00000002023PABPN18670.189Sus_scrofa
ENSGAFG00000017099pabpn110096.154ENSTRUG00000023664pabpn110096.154Takifugu_rubripes
ENSGAFG00000017099pabpn19291.705ENSTNIG00000005369pabpn19094.388Tetraodon_nigroviridis
ENSGAFG00000017099pabpn18682.126ENSUAMG00000024460PABPN16881.905Ursus_americanus
ENSGAFG00000017099pabpn19972.222ENSUMAG00000014288BCL2L2-PABPN17072.222Ursus_maritimus
ENSGAFG00000017099pabpn19972.222ENSVVUG00000019912BCL2L2-PABPN17682.564Vulpes_vulpes
ENSGAFG00000017099pabpn18482.828ENSXETG00000014597pabpn17380.734Xenopus_tropicalis
ENSGAFG00000017099pabpn17587.429ENSXCOG00000005158pabpn19887.429Xiphophorus_couchianus
ENSGAFG00000017099pabpn110099.573ENSXMAG00000006196pabpn110099.573Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us