EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000017148 (Gene tree)
Gene ID: -
Gene Symbol: casc3
Alias: -
Full Name: casc3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 8823 bases
Position: chrNHOQ01001148.1:97705-106527
Accession: ZDB-GENE-040308-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000025386	Btz	PF09405.10	6.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000025652	-	3132	-	ENSGAFP00000025386	874 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000017148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000017148's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000017148	casc3	53	60.963	ENSG00000108349	CASC3	74	64.286	Homo_sapiens
ENSGAFG00000017148	casc3	86	69.755	ENSAPOG00000008467	casc3	98	70.460	Acanthochromis_polyacanthus
ENSGAFG00000017148	casc3	86	72.494	ENSAOCG00000016676	casc3	98	71.005	Amphiprion_ocellaris
ENSGAFG00000017148	casc3	86	72.552	ENSAPEG00000006787	casc3	98	71.059	Amphiprion_percula
ENSGAFG00000017148	casc3	86	74.646	ENSATEG00000017196	casc3	98	75.742	Anabas_testudineus
ENSGAFG00000017148	casc3	66	48.052	ENSANAG00000034820	-	82	48.408	Aotus_nancymaae
ENSGAFG00000017148	casc3	86	75.455	ENSACLG00000016198	casc3	98	75.489	Astatotilapia_calliptera
ENSGAFG00000017148	casc3	67	50.000	ENSBTAG00000006250	CASC3	61	66.667	Bos_taurus
ENSGAFG00000017148	casc3	68	48.000	ENSCJAG00000016032	CASC3	75	50.382	Callithrix_jacchus
ENSGAFG00000017148	casc3	67	49.675	ENSCAFG00020018882	CASC3	80	52.381	Canis_lupus_dingo
ENSGAFG00000017148	casc3	67	50.325	ENSCHIG00000006338	CASC3	72	52.365	Capra_hircus
ENSGAFG00000017148	casc3	60	50.400	ENSTSYG00000002975	CASC3	72	51.653	Carlito_syrichta
ENSGAFG00000017148	casc3	50	66.049	ENSCAPG00000010514	CASC3	74	65.839	Cavia_aperea
ENSGAFG00000017148	casc3	67	49.511	ENSCPOG00000015139	CASC3	83	51.266	Cavia_porcellus
ENSGAFG00000017148	casc3	67	49.351	ENSCATG00000033593	CASC3	72	52.191	Cercocebus_atys
ENSGAFG00000017148	casc3	67	49.346	ENSCLAG00000013730	CASC3	82	51.803	Chinchilla_lanigera
ENSGAFG00000017148	casc3	67	50.655	ENSCPBG00000004750	CASC3	75	52.000	Chrysemys_picta_bellii
ENSGAFG00000017148	casc3	55	60.109	ENSCGRG00001014706	Casc3	75	51.527	Cricetulus_griseus_chok1gshd
ENSGAFG00000017148	casc3	69	48.923	ENSCGRG00000001952	Casc3	83	50.993	Cricetulus_griseus_crigri
ENSGAFG00000017148	casc3	86	66.035	ENSCSEG00000010047	casc3	98	65.482	Cynoglossus_semilaevis
ENSGAFG00000017148	casc3	86	80.658	ENSCVAG00000014935	casc3	98	80.713	Cyprinodon_variegatus
ENSGAFG00000017148	casc3	68	48.903	ENSDNOG00000017249	CASC3	69	52.590	Dasypus_novemcinctus
ENSGAFG00000017148	casc3	67	48.328	ENSETEG00000013720	CASC3	82	49.682	Echinops_telfairi
ENSGAFG00000017148	casc3	69	39.628	ENSEBUG00000010654	casc3	68	38.909	Eptatretus_burgeri
ENSGAFG00000017148	casc3	67	49.839	ENSEASG00005002909	CASC3	80	52.381	Equus_asinus_asinus
ENSGAFG00000017148	casc3	67	49.839	ENSECAG00000019947	CASC3	63	53.785	Equus_caballus
ENSGAFG00000017148	casc3	64	49.286	ENSFALG00000000412	CASC3	74	65.190	Ficedula_albicollis
ENSGAFG00000017148	casc3	67	53.101	ENSFDAG00000020696	CASC3	78	53.600	Fukomys_damarensis
ENSGAFG00000017148	casc3	86	80.079	ENSFHEG00000015793	casc3	98	80.000	Fundulus_heteroclitus
ENSGAFG00000017148	casc3	65	47.405	ENSGALG00000031813	CASC3	81	50.162	Gallus_gallus
ENSGAFG00000017148	casc3	50	67.105	ENSGAGG00000008432	CASC3	75	67.333	Gopherus_agassizii
ENSGAFG00000017148	casc3	67	48.701	ENSGGOG00000005067	CASC3	73	51.793	Gorilla_gorilla
ENSGAFG00000017148	casc3	86	75.714	ENSHBUG00000013155	casc3	98	75.750	Haplochromis_burtoni
ENSGAFG00000017148	casc3	86	61.349	ENSHCOG00000002664	casc3	93	60.137	Hippocampus_comes
ENSGAFG00000017148	casc3	68	48.896	ENSJJAG00000023525	Casc3	81	50.853	Jaculus_jaculus
ENSGAFG00000017148	casc3	80	76.366	ENSKMAG00000019507	casc3	97	77.503	Kryptolebias_marmoratus
ENSGAFG00000017148	casc3	83	69.290	ENSLBEG00000005435	casc3	99	69.068	Labrus_bergylta
ENSGAFG00000017148	casc3	69	47.188	ENSLACG00000013200	CASC3	72	49.359	Latimeria_chalumnae
ENSGAFG00000017148	casc3	59	63.636	ENSLOCG00000013518	casc3	62	65.649	Lepisosteus_oculatus
ENSGAFG00000017148	casc3	66	48.428	ENSLAFG00000000606	CASC3	82	49.180	Loxodonta_africana
ENSGAFG00000017148	casc3	67	49.351	ENSMFAG00000041496	CASC3	80	52.191	Macaca_fascicularis
ENSGAFG00000017148	casc3	67	49.351	ENSMMUG00000045187	CASC3	73	51.155	Macaca_mulatta
ENSGAFG00000017148	casc3	60	52.400	ENSMLEG00000029049	CASC3	79	52.066	Mandrillus_leucophaeus
ENSGAFG00000017148	casc3	83	71.141	ENSMAMG00000005235	casc3	94	70.755	Mastacembelus_armatus
ENSGAFG00000017148	casc3	86	75.455	ENSMZEG00005003815	casc3	98	75.489	Maylandia_zebra
ENSGAFG00000017148	casc3	63	47.232	ENSMGAG00000013247	CASC3	81	51.739	Meleagris_gallopavo
ENSGAFG00000017148	casc3	86	68.653	ENSMMOG00000014339	casc3	98	68.449	Mola_mola
ENSGAFG00000017148	casc3	53	91.919	ENSMALG00000019771	casc3	80	90.090	Monopterus_albus
ENSGAFG00000017148	casc3	54	61.850	MGP_CAROLIEiJ_G0017099	Casc3	73	52.419	Mus_caroli
ENSGAFG00000017148	casc3	54	61.850	ENSMUSG00000078676	Casc3	73	52.614	Mus_musculus
ENSGAFG00000017148	casc3	54	61.850	MGP_SPRETEiJ_G0017943	Casc3	73	52.419	Mus_spretus
ENSGAFG00000017148	casc3	54	60.963	ENSMPUG00000014903	CASC3	72	52.590	Mustela_putorius_furo
ENSGAFG00000017148	casc3	67	49.846	ENSMLUG00000010520	CASC3	71	53.441	Myotis_lucifugus
ENSGAFG00000017148	casc3	67	49.355	ENSNLEG00000001598	CASC3	73	51.839	Nomascus_leucogenys
ENSGAFG00000017148	casc3	67	48.734	ENSODEG00000017858	CASC3	82	50.489	Octodon_degus
ENSGAFG00000017148	casc3	86	74.806	ENSONIG00000009337	casc3	98	73.377	Oreochromis_niloticus
ENSGAFG00000017148	casc3	86	67.104	ENSORLG00000023125	casc3	98	66.447	Oryzias_latipes
ENSGAFG00000017148	casc3	53	60.963	ENSOGAG00000034486	CASC3	73	51.765	Otolemur_garnettii
ENSGAFG00000017148	casc3	69	49.231	ENSOARG00000013239	CASC3	72	52.988	Ovis_aries
ENSGAFG00000017148	casc3	67	48.701	ENSPPAG00000035069	CASC3	73	51.793	Pan_paniscus
ENSGAFG00000017148	casc3	60	53.629	ENSPTIG00000010891	CASC3	73	51.538	Panthera_tigris_altaica
ENSGAFG00000017148	casc3	67	49.026	ENSPANG00000021708	CASC3	73	50.825	Papio_anubis
ENSGAFG00000017148	casc3	69	49.245	ENSPEMG00000009774	Casc3	84	51.475	Peromyscus_maniculatus_bairdii
ENSGAFG00000017148	casc3	62	49.265	ENSPCIG00000025678	CASC3	80	48.544	Phascolarctos_cinereus
ENSGAFG00000017148	casc3	88	84.476	ENSPFOG00000017632	casc3	94	92.308	Poecilia_formosa
ENSGAFG00000017148	casc3	86	90.707	ENSPLAG00000005268	casc3	98	92.641	Poecilia_latipinna
ENSGAFG00000017148	casc3	56	95.858	ENSPMEG00000010299	casc3	79	96.350	Poecilia_mexicana
ENSGAFG00000017148	casc3	68	93.478	ENSPREG00000011856	casc3	89	93.613	Poecilia_reticulata
ENSGAFG00000017148	casc3	86	75.714	ENSPNYG00000011962	casc3	98	75.750	Pundamilia_nyererei
ENSGAFG00000017148	casc3	54	58.947	ENSRNOG00000009716	Casc3	81	53.629	Rattus_norvegicus
ENSGAFG00000017148	casc3	59	52.282	ENSSBOG00000031406	CASC3	74	63.743	Saimiri_boliviensis_boliviensis
ENSGAFG00000017148	casc3	58	53.333	ENSSHAG00000013338	CASC3	72	64.780	Sarcophilus_harrisii
ENSGAFG00000017148	casc3	86	67.710	ENSSMAG00000016096	casc3	98	67.875	Scophthalmus_maximus
ENSGAFG00000017148	casc3	86	73.454	ENSSDUG00000016893	casc3	94	74.515	Seriola_dumerili
ENSGAFG00000017148	casc3	76	73.913	ENSSLDG00000020308	casc3	98	76.093	Seriola_lalandi_dorsalis
ENSGAFG00000017148	casc3	86	74.103	ENSSPAG00000023008	casc3	98	70.935	Stegastes_partitus
ENSGAFG00000017148	casc3	60	53.543	ENSSSCG00000017477	CASC3	70	65.269	Sus_scrofa
ENSGAFG00000017148	casc3	51	56.291	ENSTGUG00000002300	CASC3	80	65.766	Taeniopygia_guttata
ENSGAFG00000017148	casc3	83	65.583	ENSTRUG00000000673	casc3	94	62.687	Takifugu_rubripes
ENSGAFG00000017148	casc3	86	61.458	ENSTNIG00000003208	casc3	92	69.180	Tetraodon_nigroviridis
ENSGAFG00000017148	casc3	66	49.675	ENSUAMG00000015116	CASC3	80	51.984	Ursus_americanus
ENSGAFG00000017148	casc3	52	61.364	ENSUMAG00000017697	CASC3	86	62.874	Ursus_maritimus
ENSGAFG00000017148	casc3	86	93.955	ENSXMAG00000013937	casc3	98	94.195	Xiphophorus_maculatus