EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000017252 (Gene tree)
Gene ID: -
Gene Symbol: kars
Alias: cb530|wu:fa16h02|zgc:92483
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 8391 bases
Position: chrNHOQ01002371.1:1038618-1047008
Accession: ZDB-GENE-021115-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000025552	tRNA_anti-codon	PF01336.25	5.2e-13	1	1
ENSGAFP00000025550	tRNA_anti-codon	PF01336.25	6e-13	1	1
ENSGAFP00000025552	tRNA-synt_2	PF00152.20	1.5e-78	1	1
ENSGAFP00000025550	tRNA-synt_2	PF00152.20	1.8e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000025818	-	2754	-	ENSGAFP00000025552	577 (aa)	-	-
ENSGAFT00000025816	-	2922	-	ENSGAFP00000025550	609 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000017252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000017252's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000017252	kars	99	79.690	ENSG00000065427	KARS	100	88.235	Homo_sapiens
ENSGAFG00000017252	kars	99	88.980	ENSAPOG00000010997	kars	99	88.651	Acanthochromis_polyacanthus
ENSGAFG00000017252	kars	99	77.911	ENSAMEG00000005347	KARS	93	77.911	Ailuropoda_melanoleuca
ENSGAFG00000017252	kars	99	86.828	ENSACIG00000000304	kars	99	86.285	Amphilophus_citrinellus
ENSGAFG00000017252	kars	97	90.941	ENSAOCG00000012971	kars	98	90.847	Amphiprion_ocellaris
ENSGAFG00000017252	kars	99	90.476	ENSAPEG00000011144	kars	99	90.476	Amphiprion_percula
ENSGAFG00000017252	kars	99	88.908	ENSATEG00000004954	kars	99	88.735	Anabas_testudineus
ENSGAFG00000017252	kars	93	80.112	ENSAPLG00000012705	KARS	97	80.561	Anas_platyrhynchos
ENSGAFG00000017252	kars	98	78.109	ENSACAG00000007577	KARS	90	78.109	Anolis_carolinensis
ENSGAFG00000017252	kars	97	66.318	ENSANAG00000031739	-	94	66.018	Aotus_nancymaae
ENSGAFG00000017252	kars	99	79.690	ENSANAG00000030403	-	97	79.862	Aotus_nancymaae
ENSGAFG00000017252	kars	99	91.508	ENSACLG00000001613	kars	99	90.954	Astatotilapia_calliptera
ENSGAFG00000017252	kars	99	88.215	ENSAMXG00000030719	kars	99	88.215	Astyanax_mexicanus
ENSGAFG00000017252	kars	99	80.000	ENSBTAG00000015677	KARS	75	79.452	Bos_taurus
ENSGAFG00000017252	kars	97	61.111	WBGene00002238	kars-1	97	63.600	Caenorhabditis_elegans
ENSGAFG00000017252	kars	99	80.207	ENSCJAG00000014213	KARS	97	80.207	Callithrix_jacchus
ENSGAFG00000017252	kars	99	78.596	ENSCAFG00000020069	KARS	93	78.596	Canis_familiaris
ENSGAFG00000017252	kars	99	80.000	ENSCAFG00020001721	KARS	96	80.000	Canis_lupus_dingo
ENSGAFG00000017252	kars	96	79.391	ENSCHIG00000016073	-	93	79.391	Capra_hircus
ENSGAFG00000017252	kars	99	80.172	ENSCHIG00000014108	-	97	80.172	Capra_hircus
ENSGAFG00000017252	kars	98	81.086	ENSTSYG00000001643	KARS	97	80.817	Carlito_syrichta
ENSGAFG00000017252	kars	98	73.776	ENSCAPG00000016234	KARS	96	74.035	Cavia_aperea
ENSGAFG00000017252	kars	99	80.137	ENSCPOG00000012036	KARS	98	80.137	Cavia_porcellus
ENSGAFG00000017252	kars	93	65.201	ENSCCAG00000030337	-	99	65.201	Cebus_capucinus
ENSGAFG00000017252	kars	99	80.207	ENSCCAG00000034307	-	97	80.034	Cebus_capucinus
ENSGAFG00000017252	kars	99	78.819	ENSCATG00000038129	KARS	97	78.819	Cercocebus_atys
ENSGAFG00000017252	kars	99	78.793	ENSCLAG00000007905	KARS	97	78.966	Chinchilla_lanigera
ENSGAFG00000017252	kars	97	78.697	ENSCSAG00000003664	KARS	91	78.873	Chlorocebus_sabaeus
ENSGAFG00000017252	kars	79	84.902	ENSCHOG00000013447	KARS	73	84.902	Choloepus_hoffmanni
ENSGAFG00000017252	kars	94	68.991	ENSCPBG00000002553	-	94	71.484	Chrysemys_picta_bellii
ENSGAFG00000017252	kars	99	80.382	ENSCPBG00000026969	KARS	97	80.035	Chrysemys_picta_bellii
ENSGAFG00000017252	kars	98	68.673	ENSCING00000009513	-	98	68.673	Ciona_intestinalis
ENSGAFG00000017252	kars	55	73.125	ENSCSAVG00000001136	-	100	73.946	Ciona_savignyi
ENSGAFG00000017252	kars	98	70.070	ENSCSAVG00000007684	-	98	69.947	Ciona_savignyi
ENSGAFG00000017252	kars	98	75.742	ENSCANG00000032813	KARS	96	75.742	Colobus_angolensis_palliatus
ENSGAFG00000017252	kars	99	81.002	ENSCGRG00001004055	KARS	97	80.829	Cricetulus_griseus_chok1gshd
ENSGAFG00000017252	kars	99	81.002	ENSCGRG00000014242	KARS	97	80.829	Cricetulus_griseus_crigri
ENSGAFG00000017252	kars	99	90.767	ENSCSEG00000008324	kars	99	90.767	Cynoglossus_semilaevis
ENSGAFG00000017252	kars	100	93.934	ENSCVAG00000019686	kars	100	93.934	Cyprinodon_variegatus
ENSGAFG00000017252	kars	99	87.500	ENSDARG00000103799	kars	99	90.467	Danio_rerio
ENSGAFG00000017252	kars	97	80.282	ENSDNOG00000002241	KARS	91	80.458	Dasypus_novemcinctus
ENSGAFG00000017252	kars	99	79.483	ENSDORG00000004780	-	97	79.483	Dipodomys_ordii
ENSGAFG00000017252	kars	96	62.703	ENSDORG00000024214	-	96	62.703	Dipodomys_ordii
ENSGAFG00000017252	kars	98	71.252	FBgn0027084	LysRS	98	70.723	Drosophila_melanogaster
ENSGAFG00000017252	kars	99	79.281	ENSETEG00000008353	KARS	93	79.281	Echinops_telfairi
ENSGAFG00000017252	kars	99	71.678	ENSEBUG00000001284	-	98	71.678	Eptatretus_burgeri
ENSGAFG00000017252	kars	100	78.938	ENSEASG00005013497	KARS	96	80.488	Equus_asinus_asinus
ENSGAFG00000017252	kars	97	81.593	ENSECAG00000013424	KARS	96	80.488	Equus_caballus
ENSGAFG00000017252	kars	99	73.137	ENSEEUG00000007042	KARS	94	72.432	Erinaceus_europaeus
ENSGAFG00000017252	kars	97	81.172	ENSELUG00000014575	kars	96	80.995	Esox_lucius
ENSGAFG00000017252	kars	99	79.861	ENSFCAG00000008573	KARS	97	79.381	Felis_catus
ENSGAFG00000017252	kars	99	78.231	ENSFALG00000002543	KARS	99	78.231	Ficedula_albicollis
ENSGAFG00000017252	kars	99	79.310	ENSFDAG00000007155	KARS	97	79.310	Fukomys_damarensis
ENSGAFG00000017252	kars	100	92.939	ENSFHEG00000006172	kars	100	92.939	Fundulus_heteroclitus
ENSGAFG00000017252	kars	98	86.596	ENSGMOG00000002633	kars	99	84.804	Gadus_morhua
ENSGAFG00000017252	kars	99	79.275	ENSGALG00000000907	KARS	99	79.789	Gallus_gallus
ENSGAFG00000017252	kars	99	88.966	ENSGACG00000015749	kars	99	88.235	Gasterosteus_aculeatus
ENSGAFG00000017252	kars	94	68.991	ENSGAGG00000011960	-	97	71.930	Gopherus_agassizii
ENSGAFG00000017252	kars	99	80.870	ENSGAGG00000023836	KARS	97	80.522	Gopherus_agassizii
ENSGAFG00000017252	kars	99	79.518	ENSGGOG00000005515	KARS	97	79.518	Gorilla_gorilla
ENSGAFG00000017252	kars	99	91.508	ENSHBUG00000013619	kars	99	90.954	Haplochromis_burtoni
ENSGAFG00000017252	kars	99	65.188	ENSHGLG00000001298	-	97	65.017	Heterocephalus_glaber_female
ENSGAFG00000017252	kars	99	71.034	ENSHGLG00000015235	-	97	71.034	Heterocephalus_glaber_female
ENSGAFG00000017252	kars	99	79.483	ENSHGLG00000011898	KARS	98	79.894	Heterocephalus_glaber_female
ENSGAFG00000017252	kars	99	70.862	ENSHGLG00100012523	-	91	77.273	Heterocephalus_glaber_male
ENSGAFG00000017252	kars	99	79.483	ENSHGLG00100012264	KARS	97	79.483	Heterocephalus_glaber_male
ENSGAFG00000017252	kars	99	65.017	ENSHGLG00100006466	-	97	64.846	Heterocephalus_glaber_male
ENSGAFG00000017252	kars	99	89.428	ENSHCOG00000002900	kars	96	89.428	Hippocampus_comes
ENSGAFG00000017252	kars	99	89.062	ENSIPUG00000009862	kars	99	88.889	Ictalurus_punctatus
ENSGAFG00000017252	kars	99	80.000	ENSSTOG00000004205	KARS	96	80.000	Ictidomys_tridecemlineatus
ENSGAFG00000017252	kars	99	79.826	ENSJJAG00000020406	Kars	97	79.826	Jaculus_jaculus
ENSGAFG00000017252	kars	100	91.003	ENSKMAG00000006434	kars	100	91.003	Kryptolebias_marmoratus
ENSGAFG00000017252	kars	99	91.334	ENSLBEG00000026537	kars	99	89.984	Labrus_bergylta
ENSGAFG00000017252	kars	96	82.703	ENSLACG00000006667	KARS	91	82.321	Latimeria_chalumnae
ENSGAFG00000017252	kars	88	75.296	ENSLACG00000016399	-	99	75.296	Latimeria_chalumnae
ENSGAFG00000017252	kars	94	68.508	ENSLOCG00000013608	-	99	68.508	Lepisosteus_oculatus
ENSGAFG00000017252	kars	99	87.197	ENSLOCG00000004002	kars	99	87.197	Lepisosteus_oculatus
ENSGAFG00000017252	kars	98	78.772	ENSLAFG00000015340	KARS	92	78.947	Loxodonta_africana
ENSGAFG00000017252	kars	99	78.485	ENSMFAG00000040024	KARS	97	78.485	Macaca_fascicularis
ENSGAFG00000017252	kars	99	78.485	ENSMNEG00000042879	-	97	78.485	Macaca_nemestrina
ENSGAFG00000017252	kars	87	76.817	ENSMNEG00000035832	-	98	76.817	Macaca_nemestrina
ENSGAFG00000017252	kars	99	78.485	ENSMLEG00000034947	KARS	97	78.485	Mandrillus_leucophaeus
ENSGAFG00000017252	kars	99	89.984	ENSMAMG00000021559	kars	99	89.984	Mastacembelus_armatus
ENSGAFG00000017252	kars	99	91.508	ENSMZEG00005014382	kars	99	90.954	Maylandia_zebra
ENSGAFG00000017252	kars	95	80.036	ENSMGAG00000009000	KARS	98	80.036	Meleagris_gallopavo
ENSGAFG00000017252	kars	99	80.690	ENSMICG00000011997	KARS	97	80.690	Microcebus_murinus
ENSGAFG00000017252	kars	99	78.066	ENSMOCG00000019029	-	97	78.066	Microtus_ochrogaster
ENSGAFG00000017252	kars	99	81.002	ENSMOCG00000011829	Kars	97	81.002	Microtus_ochrogaster
ENSGAFG00000017252	kars	97	89.840	ENSMMOG00000016934	kars	99	89.840	Mola_mola
ENSGAFG00000017252	kars	96	78.393	ENSMODG00000002215	-	97	78.571	Monodelphis_domestica
ENSGAFG00000017252	kars	99	73.913	ENSMODG00000002238	-	93	73.565	Monodelphis_domestica
ENSGAFG00000017252	kars	99	89.428	ENSMALG00000020858	kars	100	88.737	Monopterus_albus
ENSGAFG00000017252	kars	85	80.423	MGP_CAROLIEiJ_G0031588	Kars	97	82.016	Mus_caroli
ENSGAFG00000017252	kars	99	81.865	ENSMUSG00000031948	Kars	97	81.693	Mus_musculus
ENSGAFG00000017252	kars	99	81.347	MGP_PahariEiJ_G0023186	Kars	97	81.347	Mus_pahari
ENSGAFG00000017252	kars	99	81.693	MGP_SPRETEiJ_G0032706	Kars	97	81.520	Mus_spretus
ENSGAFG00000017252	kars	99	78.291	ENSMPUG00000009871	KARS	94	78.291	Mustela_putorius_furo
ENSGAFG00000017252	kars	98	81.019	ENSMLUG00000015119	-	95	80.492	Myotis_lucifugus
ENSGAFG00000017252	kars	80	53.034	ENSMLUG00000026871	-	93	53.034	Myotis_lucifugus
ENSGAFG00000017252	kars	99	80.450	ENSNGAG00000018820	-	97	80.450	Nannospalax_galili
ENSGAFG00000017252	kars	95	79.856	ENSNGAG00000022944	-	95	79.856	Nannospalax_galili
ENSGAFG00000017252	kars	99	91.146	ENSNBRG00000011098	kars	98	90.972	Neolamprologus_brichardi
ENSGAFG00000017252	kars	99	79.518	ENSNLEG00000013072	KARS	97	79.518	Nomascus_leucogenys
ENSGAFG00000017252	kars	97	77.281	ENSMEUG00000008684	KARS	91	77.460	Notamacropus_eugenii
ENSGAFG00000017252	kars	97	80.247	ENSOPRG00000012544	KARS	93	80.423	Ochotona_princeps
ENSGAFG00000017252	kars	97	57.603	ENSODEG00000009464	-	99	56.890	Octodon_degus
ENSGAFG00000017252	kars	99	79.655	ENSODEG00000013099	-	98	79.682	Octodon_degus
ENSGAFG00000017252	kars	99	91.681	ENSONIG00000005937	kars	99	91.146	Oreochromis_niloticus
ENSGAFG00000017252	kars	97	81.095	ENSOANG00000008179	KARS	95	81.062	Ornithorhynchus_anatinus
ENSGAFG00000017252	kars	99	74.310	ENSOCUG00000015553	KARS	97	74.483	Oryctolagus_cuniculus
ENSGAFG00000017252	kars	100	87.705	ENSORLG00000007627	kars	99	87.705	Oryzias_latipes
ENSGAFG00000017252	kars	100	87.705	ENSORLG00020010056	kars	99	87.705	Oryzias_latipes_hni
ENSGAFG00000017252	kars	100	87.705	ENSORLG00015008179	kars	99	87.705	Oryzias_latipes_hsok
ENSGAFG00000017252	kars	100	90.138	ENSOMEG00000001710	kars	99	90.138	Oryzias_melastigma
ENSGAFG00000017252	kars	99	73.801	ENSOGAG00000005903	KARS	93	73.801	Otolemur_garnettii
ENSGAFG00000017252	kars	93	79.380	ENSOARG00000006928	KARS	96	79.380	Ovis_aries
ENSGAFG00000017252	kars	99	79.346	ENSPPAG00000036192	KARS	97	79.346	Pan_paniscus
ENSGAFG00000017252	kars	99	80.035	ENSPPRG00000003027	KARS	97	79.518	Panthera_pardus
ENSGAFG00000017252	kars	99	79.861	ENSPTIG00000008011	KARS	97	79.346	Panthera_tigris_altaica
ENSGAFG00000017252	kars	99	79.518	ENSPTRG00000008364	KARS	97	79.518	Pan_troglodytes
ENSGAFG00000017252	kars	99	78.657	ENSPANG00000024106	KARS	91	79.049	Papio_anubis
ENSGAFG00000017252	kars	99	87.197	ENSPKIG00000009896	kars	99	87.197	Paramormyrops_kingsleyae
ENSGAFG00000017252	kars	97	80.536	ENSPSIG00000009294	KARS	96	80.714	Pelodiscus_sinensis
ENSGAFG00000017252	kars	90	72.414	ENSPSIG00000003041	-	94	73.346	Pelodiscus_sinensis
ENSGAFG00000017252	kars	97	91.786	ENSPMGG00000006117	kars	99	91.607	Periophthalmus_magnuspinnatus
ENSGAFG00000017252	kars	99	80.690	ENSPEMG00000012277	Kars	97	80.690	Peromyscus_maniculatus_bairdii
ENSGAFG00000017252	kars	97	74.778	ENSPMAG00000008360	-	91	74.600	Petromyzon_marinus
ENSGAFG00000017252	kars	97	77.199	ENSPCIG00000025469	-	90	77.419	Phascolarctos_cinereus
ENSGAFG00000017252	kars	99	79.304	ENSPCIG00000010761	-	97	79.304	Phascolarctos_cinereus
ENSGAFG00000017252	kars	100	97.701	ENSPFOG00000013253	kars	100	97.701	Poecilia_formosa
ENSGAFG00000017252	kars	100	97.701	ENSPLAG00000004189	kars	100	97.701	Poecilia_latipinna
ENSGAFG00000017252	kars	100	97.537	ENSPMEG00000015698	kars	100	97.537	Poecilia_mexicana
ENSGAFG00000017252	kars	100	97.373	ENSPREG00000023179	kars	100	97.373	Poecilia_reticulata
ENSGAFG00000017252	kars	97	79.577	ENSPPYG00000007567	KARS	91	79.754	Pongo_abelii
ENSGAFG00000017252	kars	89	75.244	ENSPCAG00000010790	KARS	98	75.244	Procavia_capensis
ENSGAFG00000017252	kars	98	74.296	ENSPCOG00000003166	KARS	96	74.296	Propithecus_coquereli
ENSGAFG00000017252	kars	97	80.634	ENSPVAG00000006746	KARS	97	76.721	Pteropus_vampyrus
ENSGAFG00000017252	kars	99	91.508	ENSPNYG00000013095	kars	99	90.954	Pundamilia_nyererei
ENSGAFG00000017252	kars	99	89.081	ENSPNAG00000013828	kars	99	89.081	Pygocentrus_nattereri
ENSGAFG00000017252	kars	97	80.668	ENSRNOG00000019456	Kars	91	81.019	Rattus_norvegicus
ENSGAFG00000017252	kars	99	78.472	ENSRBIG00000030118	KARS	97	78.472	Rhinopithecus_bieti
ENSGAFG00000017252	kars	99	78.472	ENSRROG00000041418	KARS	97	78.472	Rhinopithecus_roxellana
ENSGAFG00000017252	kars	78	33.680	YNL073W	-	82	33.680	Saccharomyces_cerevisiae
ENSGAFG00000017252	kars	98	55.420	YDR037W	KRS1	96	55.594	Saccharomyces_cerevisiae
ENSGAFG00000017252	kars	99	80.034	ENSSBOG00000019255	KARS	98	80.531	Saimiri_boliviensis_boliviensis
ENSGAFG00000017252	kars	94	68.946	ENSSHAG00000009005	-	92	71.262	Sarcophilus_harrisii
ENSGAFG00000017252	kars	96	74.250	ENSSHAG00000001359	-	97	74.427	Sarcophilus_harrisii
ENSGAFG00000017252	kars	97	66.192	ENSSHAG00000002050	-	90	66.252	Sarcophilus_harrisii
ENSGAFG00000017252	kars	96	88.689	ENSSFOG00015014837	kars	99	88.689	Scleropages_formosus
ENSGAFG00000017252	kars	99	90.641	ENSSMAG00000021441	kars	99	90.641	Scophthalmus_maximus
ENSGAFG00000017252	kars	99	92.201	ENSSDUG00000001202	kars	99	92.201	Seriola_dumerili
ENSGAFG00000017252	kars	97	91.829	ENSSLDG00000021220	kars	98	92.007	Seriola_lalandi_dorsalis
ENSGAFG00000017252	kars	76	84.821	ENSSARG00000011493	KARS	77	84.821	Sorex_araneus
ENSGAFG00000017252	kars	99	79.795	ENSSPUG00000004974	KARS	98	79.623	Sphenodon_punctatus
ENSGAFG00000017252	kars	66	65.079	ENSSPUG00000000449	-	83	68.169	Sphenodon_punctatus
ENSGAFG00000017252	kars	99	90.969	ENSSPAG00000020365	kars	97	91.459	Stegastes_partitus
ENSGAFG00000017252	kars	99	79.725	ENSSSCG00000002704	KARS	97	79.725	Sus_scrofa
ENSGAFG00000017252	kars	97	80.000	ENSTGUG00000008400	KARS	100	80.000	Taeniopygia_guttata
ENSGAFG00000017252	kars	98	86.323	ENSTRUG00000017551	kars	99	84.046	Takifugu_rubripes
ENSGAFG00000017252	kars	90	90.613	ENSTNIG00000009351	kars	97	87.080	Tetraodon_nigroviridis
ENSGAFG00000017252	kars	97	62.014	ENSTBEG00000004610	KARS	98	62.014	Tupaia_belangeri
ENSGAFG00000017252	kars	97	79.929	ENSTTRG00000001221	KARS	90	80.284	Tursiops_truncatus
ENSGAFG00000017252	kars	98	79.617	ENSUAMG00000017557	KARS	96	79.617	Ursus_americanus
ENSGAFG00000017252	kars	99	78.082	ENSUMAG00000014559	KARS	93	78.082	Ursus_maritimus
ENSGAFG00000017252	kars	99	76.581	ENSVPAG00000003716	KARS	94	76.581	Vicugna_pacos
ENSGAFG00000017252	kars	99	79.652	ENSVVUG00000024338	KARS	98	79.856	Vulpes_vulpes
ENSGAFG00000017252	kars	100	78.938	ENSXETG00000003569	kars	99	78.767	Xenopus_tropicalis
ENSGAFG00000017252	kars	97	98.390	ENSXCOG00000011313	kars	100	98.390	Xiphophorus_couchianus
ENSGAFG00000017252	kars	100	98.440	ENSXMAG00000003191	kars	100	98.440	Xiphophorus_maculatus