EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000017428 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 41928 bases
Position: chrNHOQ01002686.1:1940697-1982624
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000025829	RRM_1	PF00076.22	9.1e-05	1	1
ENSGAFP00000025828	RRM_1	PF00076.22	9.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000026096	-	2322	-	ENSGAFP00000025829	209 (aa)	-	-
ENSGAFT00000026095	-	2374	-	ENSGAFP00000025828	236 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000017428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000017428's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000017428	-	56	54.545	ENSG00000100320	RBFOX2	89	50.847	Homo_sapiens
ENSGAFG00000017428	-	95	63.454	ENSAPOG00000004877	rbfox2	54	62.651	Acanthochromis_polyacanthus
ENSGAFG00000017428	-	95	84.348	ENSAPOG00000021561	-	51	83.043	Acanthochromis_polyacanthus
ENSGAFG00000017428	-	95	63.052	ENSAOCG00000013752	rbfox2	54	62.249	Amphiprion_ocellaris
ENSGAFG00000017428	-	95	78.894	ENSAOCG00000015358	-	53	76.518	Amphiprion_ocellaris
ENSGAFG00000017428	-	95	63.454	ENSAPEG00000022359	rbfox2	54	62.651	Amphiprion_percula
ENSGAFG00000017428	-	95	77.733	ENSAPEG00000013905	-	53	76.518	Amphiprion_percula
ENSGAFG00000017428	-	95	82.174	ENSATEG00000009959	-	52	81.739	Anabas_testudineus
ENSGAFG00000017428	-	95	62.249	ENSATEG00000021951	rbfox2	54	61.446	Anabas_testudineus
ENSGAFG00000017428	-	95	84.783	ENSACLG00000017380	-	51	83.043	Astatotilapia_calliptera
ENSGAFG00000017428	-	95	61.044	ENSACLG00000009744	rbfox2	53	60.241	Astatotilapia_calliptera
ENSGAFG00000017428	-	95	64.348	ENSAMXG00000011451	rbfox2	51	62.609	Astyanax_mexicanus
ENSGAFG00000017428	-	95	61.200	ENSCSEG00000007748	rbfox2	51	60.956	Cynoglossus_semilaevis
ENSGAFG00000017428	-	95	81.466	ENSCSEG00000007360	-	50	80.172	Cynoglossus_semilaevis
ENSGAFG00000017428	-	95	61.789	ENSELUG00000009404	-	50	61.382	Esox_lucius
ENSGAFG00000017428	-	60	49.624	ENSFCAG00000040224	-	77	50.000	Felis_catus
ENSGAFG00000017428	-	95	61.044	ENSFHEG00000010546	rbfox2	92	64.780	Fundulus_heteroclitus
ENSGAFG00000017428	-	95	61.355	ENSGACG00000015968	rbfox2	99	59.459	Gasterosteus_aculeatus
ENSGAFG00000017428	-	95	61.044	ENSHBUG00000004356	rbfox2	53	60.241	Haplochromis_burtoni
ENSGAFG00000017428	-	95	85.153	ENSHBUG00000000856	-	51	83.406	Haplochromis_burtoni
ENSGAFG00000017428	-	95	66.667	ENSHCOG00000005662	-	51	65.447	Hippocampus_comes
ENSGAFG00000017428	-	95	59.919	ENSHCOG00000016102	rbfox2	53	58.871	Hippocampus_comes
ENSGAFG00000017428	-	95	55.823	ENSIPUG00000016896	rbfox2	50	58.974	Ictalurus_punctatus
ENSGAFG00000017428	-	95	60.000	ENSKMAG00000021880	-	54	59.438	Kryptolebias_marmoratus
ENSGAFG00000017428	-	95	81.313	ENSKMAG00000013354	-	53	73.307	Kryptolebias_marmoratus
ENSGAFG00000017428	-	95	81.304	ENSMAMG00000008980	-	51	81.304	Mastacembelus_armatus
ENSGAFG00000017428	-	95	61.847	ENSMAMG00000004293	rbfox2	54	60.241	Mastacembelus_armatus
ENSGAFG00000017428	-	95	85.217	ENSMZEG00005004959	-	51	83.478	Maylandia_zebra
ENSGAFG00000017428	-	95	61.044	ENSMZEG00005023838	rbfox2	54	60.241	Maylandia_zebra
ENSGAFG00000017428	-	78	46.154	ENSMUSG00000033565	Rbfox2	91	47.423	Mus_musculus
ENSGAFG00000017428	-	95	61.044	ENSNBRG00000018155	rbfox2	54	60.241	Neolamprologus_brichardi
ENSGAFG00000017428	-	95	78.543	ENSNBRG00000001568	-	57	76.923	Neolamprologus_brichardi
ENSGAFG00000017428	-	95	61.446	ENSORLG00000028082	rbfox2	53	60.241	Oryzias_latipes
ENSGAFG00000017428	-	95	74.390	ENSORLG00000014948	-	53	73.984	Oryzias_latipes
ENSGAFG00000017428	-	95	61.446	ENSORLG00020008976	rbfox2	53	60.241	Oryzias_latipes_hni
ENSGAFG00000017428	-	95	74.797	ENSORLG00020005676	-	53	74.390	Oryzias_latipes_hni
ENSGAFG00000017428	-	95	61.446	ENSORLG00015007027	rbfox2	53	60.241	Oryzias_latipes_hsok
ENSGAFG00000017428	-	95	74.797	ENSORLG00015000797	-	53	74.390	Oryzias_latipes_hsok
ENSGAFG00000017428	-	95	76.829	ENSOMEG00000007909	-	53	76.829	Oryzias_melastigma
ENSGAFG00000017428	-	95	61.044	ENSOMEG00000015966	rbfox2	54	60.241	Oryzias_melastigma
ENSGAFG00000017428	-	96	64.502	ENSPKIG00000006854	-	55	62.174	Paramormyrops_kingsleyae
ENSGAFG00000017428	-	95	61.847	ENSPFOG00000014209	rbfox2	53	61.044	Poecilia_formosa
ENSGAFG00000017428	-	98	81.452	ENSPFOG00000001869	-	97	79.920	Poecilia_formosa
ENSGAFG00000017428	-	98	97.561	ENSPMEG00000018399	-	100	97.561	Poecilia_mexicana
ENSGAFG00000017428	-	95	85.153	ENSPNYG00000020595	-	50	83.406	Pundamilia_nyererei
ENSGAFG00000017428	-	95	61.446	ENSPNYG00000016161	rbfox2	53	60.643	Pundamilia_nyererei
ENSGAFG00000017428	-	94	51.282	ENSPNAG00000014196	-	50	49.130	Pygocentrus_nattereri
ENSGAFG00000017428	-	96	60.241	ENSPNAG00000000168	rbfox2	57	59.036	Pygocentrus_nattereri
ENSGAFG00000017428	-	95	72.177	ENSSMAG00000004317	-	53	71.371	Scophthalmus_maximus
ENSGAFG00000017428	-	95	60.887	ENSSMAG00000013662	rbfox2	54	60.484	Scophthalmus_maximus
ENSGAFG00000017428	-	95	63.454	ENSSDUG00000004292	rbfox2	54	62.651	Seriola_dumerili
ENSGAFG00000017428	-	95	73.279	ENSSDUG00000009511	-	53	75.304	Seriola_dumerili
ENSGAFG00000017428	-	95	74.899	ENSSLDG00000018052	-	53	74.089	Seriola_lalandi_dorsalis
ENSGAFG00000017428	-	95	62.651	ENSSLDG00000023983	rbfox2	52	63.052	Seriola_lalandi_dorsalis
ENSGAFG00000017428	-	95	75.304	ENSSPAG00000016272	-	53	74.899	Stegastes_partitus
ENSGAFG00000017428	-	95	63.454	ENSSPAG00000013681	rbfox2	54	62.651	Stegastes_partitus
ENSGAFG00000017428	-	95	90.909	ENSXMAG00000026769	-	52	90.909	Xiphophorus_maculatus