EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000017596 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-33c12.4
Alias: fc10f01|si:ch211-243o19.6|wu:fc10f01
Full Name: si:dkey-33c12.4
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 11089 bases
Position: chrNHOQ01000541.1:3503662-3514750
Accession: ZDB-GENE-030131-2527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000026069	RRM_1	PF00076.22	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000026338	-	3324	-	ENSGAFP00000026069	650 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000017596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000017596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000017596	si:dkey-33c12.4	50	33.913	ENSGAFG00000009373	zgc:123010	62	41.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000017596	si:dkey-33c12.4	100	61.012	ENSAPOG00000005058	si:dkey-33c12.4	99	60.714	Acanthochromis_polyacanthus
ENSGAFG00000017596	si:dkey-33c12.4	98	61.854	ENSAOCG00000020066	si:dkey-33c12.4	97	61.854	Amphiprion_ocellaris
ENSGAFG00000017596	si:dkey-33c12.4	54	33.244	ENSATEG00000001220	zgc:123010	64	32.161	Anabas_testudineus
ENSGAFG00000017596	si:dkey-33c12.4	99	59.451	ENSATEG00000018885	si:dkey-33c12.4	99	58.931	Anabas_testudineus
ENSGAFG00000017596	si:dkey-33c12.4	99	61.469	ENSACLG00000014192	si:dkey-33c12.4	99	60.620	Astatotilapia_calliptera
ENSGAFG00000017596	si:dkey-33c12.4	96	35.693	ENSAMXG00000010871	si:dkey-33c12.4	55	43.968	Astyanax_mexicanus
ENSGAFG00000017596	si:dkey-33c12.4	53	34.444	ENSAMXG00000041967	zgc:123010	53	45.578	Astyanax_mexicanus
ENSGAFG00000017596	si:dkey-33c12.4	53	35.598	ENSCPBG00000024454	-	50	34.521	Chrysemys_picta_bellii
ENSGAFG00000017596	si:dkey-33c12.4	72	34.185	ENSCSEG00000002755	-	57	40.533	Cynoglossus_semilaevis
ENSGAFG00000017596	si:dkey-33c12.4	65	30.405	ENSCVAG00000013288	zgc:123010	59	40.000	Cyprinodon_variegatus
ENSGAFG00000017596	si:dkey-33c12.4	100	66.159	ENSCVAG00000006564	-	99	67.378	Cyprinodon_variegatus
ENSGAFG00000017596	si:dkey-33c12.4	60	37.713	ENSCVAG00000004187	-	52	42.991	Cyprinodon_variegatus
ENSGAFG00000017596	si:dkey-33c12.4	96	36.170	ENSDARG00000057890	si:dkey-33c12.4	55	43.700	Danio_rerio
ENSGAFG00000017596	si:dkey-33c12.4	96	36.119	ENSELUG00000002009	si:dkey-33c12.4	78	61.940	Esox_lucius
ENSGAFG00000017596	si:dkey-33c12.4	84	31.793	ENSELUG00000021447	-	92	30.362	Esox_lucius
ENSGAFG00000017596	si:dkey-33c12.4	81	35.651	ENSELUG00000001633	-	57	40.464	Esox_lucius
ENSGAFG00000017596	si:dkey-33c12.4	100	74.433	ENSFHEG00000005521	si:dkey-33c12.4	99	74.138	Fundulus_heteroclitus
ENSGAFG00000017596	si:dkey-33c12.4	99	61.862	ENSHBUG00000010735	si:dkey-33c12.4	99	61.712	Haplochromis_burtoni
ENSGAFG00000017596	si:dkey-33c12.4	96	39.006	ENSIPUG00000005998	si:dkey-33c12.4	58	43.719	Ictalurus_punctatus
ENSGAFG00000017596	si:dkey-33c12.4	60	35.950	ENSKMAG00000021350	zgc:123010	65	41.040	Kryptolebias_marmoratus
ENSGAFG00000017596	si:dkey-33c12.4	100	62.293	ENSKMAG00000016610	si:dkey-33c12.4	99	61.203	Kryptolebias_marmoratus
ENSGAFG00000017596	si:dkey-33c12.4	51	41.399	ENSKMAG00000006468	-	54	42.183	Kryptolebias_marmoratus
ENSGAFG00000017596	si:dkey-33c12.4	54	38.522	ENSLBEG00000028046	-	56	38.298	Labrus_bergylta
ENSGAFG00000017596	si:dkey-33c12.4	67	31.087	ENSLBEG00000023984	zgc:123010	60	41.618	Labrus_bergylta
ENSGAFG00000017596	si:dkey-33c12.4	91	54.620	ENSLBEG00000017203	-	99	54.950	Labrus_bergylta
ENSGAFG00000017596	si:dkey-33c12.4	99	55.352	ENSLBEG00000021088	-	99	55.352	Labrus_bergylta
ENSGAFG00000017596	si:dkey-33c12.4	53	34.815	ENSLACG00000009001	zgc:123010	66	39.130	Latimeria_chalumnae
ENSGAFG00000017596	si:dkey-33c12.4	52	35.674	ENSLACG00000004602	-	59	36.313	Latimeria_chalumnae
ENSGAFG00000017596	si:dkey-33c12.4	84	36.250	ENSLOCG00000001861	-	57	40.722	Lepisosteus_oculatus
ENSGAFG00000017596	si:dkey-33c12.4	99	60.213	ENSMAMG00000000111	si:dkey-33c12.4	99	59.604	Mastacembelus_armatus
ENSGAFG00000017596	si:dkey-33c12.4	99	61.619	ENSMZEG00005014276	si:dkey-33c12.4	99	61.469	Maylandia_zebra
ENSGAFG00000017596	si:dkey-33c12.4	60	41.404	ENSMZEG00005000585	-	52	44.954	Maylandia_zebra
ENSGAFG00000017596	si:dkey-33c12.4	50	30.702	ENSMMOG00000017955	-	65	40.845	Mola_mola
ENSGAFG00000017596	si:dkey-33c12.4	99	57.991	ENSMALG00000002265	si:dkey-33c12.4	99	58.207	Monopterus_albus
ENSGAFG00000017596	si:dkey-33c12.4	99	51.863	ENSORLG00000029651	si:dkey-33c12.4	99	50.230	Oryzias_latipes
ENSGAFG00000017596	si:dkey-33c12.4	57	30.894	ENSORLG00000007675	zgc:123010	56	40.000	Oryzias_latipes
ENSGAFG00000017596	si:dkey-33c12.4	57	31.165	ENSORLG00020003457	zgc:123010	56	40.588	Oryzias_latipes_hni
ENSGAFG00000017596	si:dkey-33c12.4	99	50.373	ENSORLG00020008750	si:dkey-33c12.4	89	50.779	Oryzias_latipes_hni
ENSGAFG00000017596	si:dkey-33c12.4	55	36.019	ENSORLG00015008373	zgc:123010	64	40.000	Oryzias_latipes_hsok
ENSGAFG00000017596	si:dkey-33c12.4	55	36.967	ENSOMEG00000003408	zgc:123010	64	40.588	Oryzias_melastigma
ENSGAFG00000017596	si:dkey-33c12.4	98	51.114	ENSOMEG00000008913	-	99	49.624	Oryzias_melastigma
ENSGAFG00000017596	si:dkey-33c12.4	88	36.289	ENSPKIG00000011819	-	54	42.559	Paramormyrops_kingsleyae
ENSGAFG00000017596	si:dkey-33c12.4	54	31.044	ENSPKIG00000015521	zgc:123010	66	31.044	Paramormyrops_kingsleyae
ENSGAFG00000017596	si:dkey-33c12.4	100	88.737	ENSPFOG00000009143	si:dkey-33c12.4	100	88.584	Poecilia_formosa
ENSGAFG00000017596	si:dkey-33c12.4	58	33.969	ENSPFOG00000001073	zgc:123010	60	39.412	Poecilia_formosa
ENSGAFG00000017596	si:dkey-33c12.4	96	89.291	ENSPLAG00000022537	si:dkey-33c12.4	100	88.486	Poecilia_latipinna
ENSGAFG00000017596	si:dkey-33c12.4	58	33.969	ENSPLAG00000007711	zgc:123010	60	39.412	Poecilia_latipinna
ENSGAFG00000017596	si:dkey-33c12.4	100	88.889	ENSPMEG00000015590	si:dkey-33c12.4	100	88.737	Poecilia_mexicana
ENSGAFG00000017596	si:dkey-33c12.4	51	41.250	ENSPREG00000019587	zgc:123010	67	41.250	Poecilia_reticulata
ENSGAFG00000017596	si:dkey-33c12.4	99	61.769	ENSPNYG00000018262	si:dkey-33c12.4	99	61.619	Pundamilia_nyererei
ENSGAFG00000017596	si:dkey-33c12.4	56	41.495	ENSPNYG00000001047	-	52	44.954	Pundamilia_nyererei
ENSGAFG00000017596	si:dkey-33c12.4	53	31.452	ENSPNYG00000023304	-	80	30.233	Pundamilia_nyererei
ENSGAFG00000017596	si:dkey-33c12.4	97	35.683	ENSPNAG00000018386	si:dkey-33c12.4	58	44.051	Pygocentrus_nattereri
ENSGAFG00000017596	si:dkey-33c12.4	55	42.105	ENSSFOG00015005186	-	55	41.828	Scleropages_formosus
ENSGAFG00000017596	si:dkey-33c12.4	56	31.362	ENSSFOG00015021394	zgc:123010	67	30.848	Scleropages_formosus
ENSGAFG00000017596	si:dkey-33c12.4	63	39.070	ENSSFOG00015009199	-	58	39.898	Scleropages_formosus
ENSGAFG00000017596	si:dkey-33c12.4	99	58.982	ENSSMAG00000008147	si:dkey-33c12.4	99	57.444	Scophthalmus_maximus
ENSGAFG00000017596	si:dkey-33c12.4	63	32.265	ENSSMAG00000002904	zgc:123010	66	44.379	Scophthalmus_maximus
ENSGAFG00000017596	si:dkey-33c12.4	99	61.970	ENSSDUG00000003213	si:dkey-33c12.4	99	61.305	Seriola_dumerili
ENSGAFG00000017596	si:dkey-33c12.4	65	34.146	ENSSDUG00000008651	zgc:123010	64	31.990	Seriola_dumerili
ENSGAFG00000017596	si:dkey-33c12.4	99	62.273	ENSSLDG00000009448	si:dkey-33c12.4	99	61.760	Seriola_lalandi_dorsalis
ENSGAFG00000017596	si:dkey-33c12.4	74	33.431	ENSSLDG00000019386	zgc:123010	67	39.572	Seriola_lalandi_dorsalis
ENSGAFG00000017596	si:dkey-33c12.4	100	61.982	ENSSPAG00000022577	-	99	60.947	Stegastes_partitus
ENSGAFG00000017596	si:dkey-33c12.4	58	31.830	ENSSPAG00000013621	zgc:123010	64	41.176	Stegastes_partitus
ENSGAFG00000017596	si:dkey-33c12.4	99	41.301	ENSTRUG00000022374	si:dkey-33c12.4	90	44.599	Takifugu_rubripes
ENSGAFG00000017596	si:dkey-33c12.4	66	35.648	ENSTRUG00000000057	-	51	37.224	Takifugu_rubripes
ENSGAFG00000017596	si:dkey-33c12.4	53	32.418	ENSXCOG00000012281	zgc:123010	72	33.242	Xiphophorus_couchianus
ENSGAFG00000017596	si:dkey-33c12.4	100	92.615	ENSXMAG00000018535	si:dkey-33c12.4	100	91.538	Xiphophorus_maculatus