EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000017757 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 12643 bases
Position: chrNHOQ01001666.1:235845-248487
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000026294	zf-C2H2	PF00096.26	7.1e-45	1	7
ENSGAFP00000026294	zf-C2H2	PF00096.26	7.1e-45	2	7
ENSGAFP00000026294	zf-C2H2	PF00096.26	7.1e-45	3	7
ENSGAFP00000026294	zf-C2H2	PF00096.26	7.1e-45	4	7
ENSGAFP00000026294	zf-C2H2	PF00096.26	7.1e-45	5	7
ENSGAFP00000026294	zf-C2H2	PF00096.26	7.1e-45	6	7
ENSGAFP00000026294	zf-C2H2	PF00096.26	7.1e-45	7	7
ENSGAFP00000026297	zf-C2H2	PF00096.26	1.7e-44	1	7
ENSGAFP00000026297	zf-C2H2	PF00096.26	1.7e-44	2	7
ENSGAFP00000026297	zf-C2H2	PF00096.26	1.7e-44	3	7
ENSGAFP00000026297	zf-C2H2	PF00096.26	1.7e-44	4	7
ENSGAFP00000026297	zf-C2H2	PF00096.26	1.7e-44	5	7
ENSGAFP00000026297	zf-C2H2	PF00096.26	1.7e-44	6	7
ENSGAFP00000026297	zf-C2H2	PF00096.26	1.7e-44	7	7
ENSGAFP00000026294	zf-met	PF12874.7	3e-05	1	1
ENSGAFP00000026297	zf-met	PF12874.7	7.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000026565	-	5601	-	ENSGAFP00000026294	1116 (aa)	-	-
ENSGAFT00000026568	-	4962	-	ENSGAFP00000026297	1198 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000017757's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000017757's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000017757	-	52	55.986	ENSGAFG00000000037	-	96	55.986
ENSGAFG00000017757	-	56	40.698	ENSGAFG00000011326	-	98	47.388

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000017757	-	53	37.363	ENSFHEG00000013445	-	94	40.467	Fundulus_heteroclitus
ENSGAFG00000017757	-	53	40.165	ENSFHEG00000013300	-	93	39.174	Fundulus_heteroclitus
ENSGAFG00000017757	-	51	34.186	ENSFHEG00000000587	-	90	41.193	Fundulus_heteroclitus
ENSGAFG00000017757	-	56	33.457	ENSFHEG00000013173	-	99	40.141	Fundulus_heteroclitus
ENSGAFG00000017757	-	52	56.757	ENSFHEG00000005999	-	89	62.963	Fundulus_heteroclitus
ENSGAFG00000017757	-	54	40.250	ENSFHEG00000013292	-	97	55.482	Fundulus_heteroclitus
ENSGAFG00000017757	-	53	66.410	ENSFHEG00000001504	-	98	65.948	Fundulus_heteroclitus
ENSGAFG00000017757	-	52	50.273	ENSFHEG00000005885	-	94	54.575	Fundulus_heteroclitus
ENSGAFG00000017757	-	52	57.085	ENSFHEG00000000766	-	99	57.085	Fundulus_heteroclitus
ENSGAFG00000017757	-	53	49.099	ENSHBUG00000015226	-	88	49.099	Haplochromis_burtoni
ENSGAFG00000017757	-	54	46.182	ENSHBUG00000002530	-	87	46.182	Haplochromis_burtoni
ENSGAFG00000017757	-	52	57.921	ENSKMAG00000014923	-	92	57.653	Kryptolebias_marmoratus
ENSGAFG00000017757	-	52	56.863	ENSKMAG00000014939	-	95	51.031	Kryptolebias_marmoratus
ENSGAFG00000017757	-	54	47.191	ENSMAMG00000022150	-	53	47.191	Mastacembelus_armatus
ENSGAFG00000017757	-	54	45.818	ENSMZEG00005009978	-	87	45.818	Maylandia_zebra
ENSGAFG00000017757	-	53	47.879	ENSPFOG00000022286	-	98	47.970	Poecilia_formosa
ENSGAFG00000017757	-	52	43.377	ENSPFOG00000004358	-	99	57.360	Poecilia_formosa
ENSGAFG00000017757	-	52	51.625	ENSPFOG00000022343	-	98	51.625	Poecilia_formosa
ENSGAFG00000017757	-	54	50.439	ENSPFOG00000007847	-	100	46.407	Poecilia_formosa
ENSGAFG00000017757	-	53	46.890	ENSPMEG00000002104	-	54	46.890	Poecilia_mexicana
ENSGAFG00000017757	-	51	54.276	ENSPMEG00000010341	-	99	54.276	Poecilia_mexicana
ENSGAFG00000017757	-	52	57.282	ENSPMEG00000010334	-	97	55.981	Poecilia_mexicana
ENSGAFG00000017757	-	100	88.711	ENSPREG00000004732	-	96	87.896	Poecilia_reticulata
ENSGAFG00000017757	-	52	36.957	ENSSPAG00000007197	-	87	55.160	Stegastes_partitus
ENSGAFG00000017757	-	100	92.369	ENSXMAG00000024482	-	90	91.833	Xiphophorus_maculatus
ENSGAFG00000017757	-	52	56.275	ENSXMAG00000028990	-	95	56.275	Xiphophorus_maculatus