EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000017787 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 10489 bases
Position: chrNHOQ01002284.1:4075103-4085591
Accession: 7658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000026356	MIF4G_like	PF09088.11	5.1e-38	1	1
ENSGAFP00000026346	MIF4G_like	PF09088.11	5.2e-38	1	1
ENSGAFP00000026351	MIF4G_like	PF09088.11	1.2e-37	1	1
ENSGAFP00000026346	MIF4G_like_2	PF09090.11	4.3e-87	1	1
ENSGAFP00000026356	MIF4G_like_2	PF09090.11	6.9e-87	1	1
ENSGAFP00000026351	MIF4G_like_2	PF09090.11	7.8e-67	1	2
ENSGAFP00000026351	MIF4G_like_2	PF09090.11	7.8e-67	2	2
ENSGAFP00000026351	MIF4G	PF02854.19	1.1e-27	1	1
ENSGAFP00000026356	MIF4G	PF02854.19	1.1e-27	1	1
ENSGAFP00000026346	MIF4G	PF02854.19	1.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000026627	NCBP1-203	2355	-	ENSGAFP00000026356	784 (aa)	-	-
ENSGAFT00000026622	NCBP1-202	3384	-	ENSGAFP00000026351	774 (aa)	-	-
ENSGAFT00000026617	NCBP1-201	3450	-	ENSGAFP00000026346	796 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000017787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000017787's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000017787	NCBP1	99	82.763	ENSG00000136937	NCBP1	99	82.890	Homo_sapiens
ENSGAFG00000017787	NCBP1	100	96.357	ENSAPOG00000008002	NCBP1	100	96.357	Acanthochromis_polyacanthus
ENSGAFG00000017787	NCBP1	99	82.933	ENSAMEG00000004763	NCBP1	99	83.059	Ailuropoda_melanoleuca
ENSGAFG00000017787	NCBP1	100	95.980	ENSACIG00000000274	NCBP1	100	95.980	Amphilophus_citrinellus
ENSGAFG00000017787	NCBP1	100	95.980	ENSAOCG00000021148	NCBP1	100	95.980	Amphiprion_ocellaris
ENSGAFG00000017787	NCBP1	100	95.980	ENSAPEG00000001701	NCBP1	100	95.980	Amphiprion_percula
ENSGAFG00000017787	NCBP1	100	96.231	ENSATEG00000006929	NCBP1	100	96.231	Anabas_testudineus
ENSGAFG00000017787	NCBP1	95	82.786	ENSAPLG00000016318	NCBP1	99	83.049	Anas_platyrhynchos
ENSGAFG00000017787	NCBP1	99	83.146	ENSACAG00000004409	NCBP1	87	83.271	Anolis_carolinensis
ENSGAFG00000017787	NCBP1	99	80.735	ENSANAG00000025744	NCBP1	99	82.361	Aotus_nancymaae
ENSGAFG00000017787	NCBP1	100	95.477	ENSACLG00000014812	NCBP1	100	95.477	Astatotilapia_calliptera
ENSGAFG00000017787	NCBP1	100	91.468	ENSAMXG00000016364	NCBP1	100	91.468	Astyanax_mexicanus
ENSGAFG00000017787	NCBP1	99	82.890	ENSBTAG00000009732	NCBP1	99	87.613	Bos_taurus
ENSGAFG00000017787	NCBP1	100	35.916	WBGene00018156	ncbp-1	100	35.793	Caenorhabditis_elegans
ENSGAFG00000017787	NCBP1	99	82.890	ENSCJAG00000010840	NCBP1	99	86.429	Callithrix_jacchus
ENSGAFG00000017787	NCBP1	99	83.016	ENSCAFG00000002445	NCBP1	99	83.143	Canis_familiaris
ENSGAFG00000017787	NCBP1	98	82.754	ENSCAFG00020017997	NCBP1	96	88.557	Canis_lupus_dingo
ENSGAFG00000017787	NCBP1	99	82.763	ENSCHIG00000020139	NCBP1	99	82.890	Capra_hircus
ENSGAFG00000017787	NCBP1	52	88.060	ENSTSYG00000011914	NCBP1	98	86.834	Carlito_syrichta
ENSGAFG00000017787	NCBP1	81	76.220	ENSCAPG00000014252	NCBP1	90	76.220	Cavia_aperea
ENSGAFG00000017787	NCBP1	95	82.181	ENSCPOG00000012573	NCBP1	98	82.314	Cavia_porcellus
ENSGAFG00000017787	NCBP1	99	82.763	ENSCCAG00000032297	NCBP1	99	82.890	Cebus_capucinus
ENSGAFG00000017787	NCBP1	99	82.763	ENSCATG00000010052	NCBP1	99	82.890	Cercocebus_atys
ENSGAFG00000017787	NCBP1	99	82.763	ENSCLAG00000014339	NCBP1	99	82.890	Chinchilla_lanigera
ENSGAFG00000017787	NCBP1	99	82.763	ENSCSAG00000010929	NCBP1	99	82.890	Chlorocebus_sabaeus
ENSGAFG00000017787	NCBP1	92	80.189	ENSCHOG00000010332	NCBP1	90	81.132	Choloepus_hoffmanni
ENSGAFG00000017787	NCBP1	99	81.258	ENSCPBG00000024344	NCBP1	99	83.333	Chrysemys_picta_bellii
ENSGAFG00000017787	NCBP1	99	54.340	ENSCING00000008990	-	99	54.214	Ciona_intestinalis
ENSGAFG00000017787	NCBP1	99	53.558	ENSCSAVG00000005300	-	99	52.308	Ciona_savignyi
ENSGAFG00000017787	NCBP1	99	82.763	ENSCANG00000036913	NCBP1	99	82.890	Colobus_angolensis_palliatus
ENSGAFG00000017787	NCBP1	99	82.510	ENSCGRG00001015771	Ncbp1	99	82.636	Cricetulus_griseus_chok1gshd
ENSGAFG00000017787	NCBP1	99	82.413	ENSCGRG00000010311	Ncbp1	99	82.542	Cricetulus_griseus_crigri
ENSGAFG00000017787	NCBP1	100	95.101	ENSCSEG00000012377	NCBP1	100	95.101	Cynoglossus_semilaevis
ENSGAFG00000017787	NCBP1	100	96.985	ENSCVAG00000008795	NCBP1	100	96.985	Cyprinodon_variegatus
ENSGAFG00000017787	NCBP1	99	82.256	ENSDNOG00000006885	NCBP1	99	82.383	Dasypus_novemcinctus
ENSGAFG00000017787	NCBP1	99	78.815	ENSDORG00000013652	Ncbp1	99	78.941	Dipodomys_ordii
ENSGAFG00000017787	NCBP1	99	57.447	FBgn0022942	Cbp80	99	57.322	Drosophila_melanogaster
ENSGAFG00000017787	NCBP1	84	33.579	FBgn0038887	CG7907	87	33.579	Drosophila_melanogaster
ENSGAFG00000017787	NCBP1	89	78.775	ENSETEG00000009705	NCBP1	89	78.775	Echinops_telfairi
ENSGAFG00000017787	NCBP1	99	73.618	ENSEBUG00000008386	NCBP1	99	73.618	Eptatretus_burgeri
ENSGAFG00000017787	NCBP1	99	82.510	ENSEASG00005022795	NCBP1	99	82.636	Equus_asinus_asinus
ENSGAFG00000017787	NCBP1	99	82.636	ENSECAG00000013847	NCBP1	99	82.763	Equus_caballus
ENSGAFG00000017787	NCBP1	95	79.095	ENSEEUG00000015973	NCBP1	99	79.228	Erinaceus_europaeus
ENSGAFG00000017787	NCBP1	100	91.092	ENSELUG00000022519	NCBP1	100	91.092	Esox_lucius
ENSGAFG00000017787	NCBP1	99	82.890	ENSFCAG00000001206	NCBP1	99	83.016	Felis_catus
ENSGAFG00000017787	NCBP1	98	83.969	ENSFALG00000001193	NCBP1	99	83.969	Ficedula_albicollis
ENSGAFG00000017787	NCBP1	99	82.510	ENSFDAG00000010864	NCBP1	99	82.636	Fukomys_damarensis
ENSGAFG00000017787	NCBP1	100	97.864	ENSFHEG00000000655	NCBP1	100	97.864	Fundulus_heteroclitus
ENSGAFG00000017787	NCBP1	100	91.343	ENSGMOG00000008653	NCBP1	99	91.343	Gadus_morhua
ENSGAFG00000017787	NCBP1	98	83.653	ENSGALG00000002087	NCBP1	99	83.563	Gallus_gallus
ENSGAFG00000017787	NCBP1	100	93.617	ENSGACG00000016772	NCBP1	99	93.617	Gasterosteus_aculeatus
ENSGAFG00000017787	NCBP1	99	83.648	ENSGAGG00000019483	NCBP1	99	83.648	Gopherus_agassizii
ENSGAFG00000017787	NCBP1	99	82.763	ENSGGOG00000001376	NCBP1	99	82.890	Gorilla_gorilla
ENSGAFG00000017787	NCBP1	100	95.477	ENSHBUG00000020843	NCBP1	100	95.477	Haplochromis_burtoni
ENSGAFG00000017787	NCBP1	99	82.636	ENSHGLG00000001882	NCBP1	99	82.763	Heterocephalus_glaber_female
ENSGAFG00000017787	NCBP1	99	72.566	ENSHGLG00000018112	-	99	72.566	Heterocephalus_glaber_female
ENSGAFG00000017787	NCBP1	99	72.314	ENSHGLG00100017373	-	99	72.314	Heterocephalus_glaber_male
ENSGAFG00000017787	NCBP1	99	82.636	ENSHGLG00100013014	NCBP1	99	82.763	Heterocephalus_glaber_male
ENSGAFG00000017787	NCBP1	74	87.542	ENSHCOG00000000204	NCBP1	87	87.542	Hippocampus_comes
ENSGAFG00000017787	NCBP1	100	89.837	ENSIPUG00000007275	ncbp1	100	89.837	Ictalurus_punctatus
ENSGAFG00000017787	NCBP1	99	82.890	ENSSTOG00000002695	NCBP1	99	83.016	Ictidomys_tridecemlineatus
ENSGAFG00000017787	NCBP1	100	96.231	ENSKMAG00000003594	NCBP1	100	96.231	Kryptolebias_marmoratus
ENSGAFG00000017787	NCBP1	100	94.052	ENSLBEG00000011661	NCBP1	100	94.052	Labrus_bergylta
ENSGAFG00000017787	NCBP1	99	77.460	ENSLACG00000013955	NCBP1	99	78.137	Latimeria_chalumnae
ENSGAFG00000017787	NCBP1	99	76.990	ENSLOCG00000009579	NCBP1	99	77.363	Lepisosteus_oculatus
ENSGAFG00000017787	NCBP1	99	82.636	ENSLAFG00000005999	NCBP1	99	82.763	Loxodonta_africana
ENSGAFG00000017787	NCBP1	99	82.763	ENSMFAG00000030994	NCBP1	99	82.890	Macaca_fascicularis
ENSGAFG00000017787	NCBP1	98	82.519	ENSMMUG00000012281	NCBP1	99	82.739	Macaca_mulatta
ENSGAFG00000017787	NCBP1	99	82.763	ENSMNEG00000042790	NCBP1	99	82.890	Macaca_nemestrina
ENSGAFG00000017787	NCBP1	99	82.763	ENSMLEG00000030374	NCBP1	99	82.890	Mandrillus_leucophaeus
ENSGAFG00000017787	NCBP1	100	95.477	ENSMAMG00000014806	NCBP1	100	95.477	Mastacembelus_armatus
ENSGAFG00000017787	NCBP1	100	95.477	ENSMZEG00005003469	NCBP1	100	95.477	Maylandia_zebra
ENSGAFG00000017787	NCBP1	97	93.220	ENSMZEG00005009290	-	100	93.220	Maylandia_zebra
ENSGAFG00000017787	NCBP1	99	81.911	ENSMAUG00000020583	Ncbp1	99	82.038	Mesocricetus_auratus
ENSGAFG00000017787	NCBP1	99	82.256	ENSMICG00000012682	NCBP1	99	82.383	Microcebus_murinus
ENSGAFG00000017787	NCBP1	99	82.383	ENSMOCG00000015818	Ncbp1	99	82.510	Microtus_ochrogaster
ENSGAFG00000017787	NCBP1	91	93.557	ENSMMOG00000002610	NCBP1	100	93.557	Mola_mola
ENSGAFG00000017787	NCBP1	99	82.465	ENSMODG00000003202	NCBP1	99	82.443	Monodelphis_domestica
ENSGAFG00000017787	NCBP1	100	95.603	ENSMALG00000003547	NCBP1	100	95.603	Monopterus_albus
ENSGAFG00000017787	NCBP1	99	82.763	MGP_CAROLIEiJ_G0025982	Ncbp1	99	82.890	Mus_caroli
ENSGAFG00000017787	NCBP1	99	82.763	ENSMUSG00000028330	Ncbp1	99	82.890	Mus_musculus
ENSGAFG00000017787	NCBP1	99	82.763	MGP_PahariEiJ_G0028318	Ncbp1	99	82.890	Mus_pahari
ENSGAFG00000017787	NCBP1	99	82.763	MGP_SPRETEiJ_G0026945	Ncbp1	99	82.890	Mus_spretus
ENSGAFG00000017787	NCBP1	99	83.143	ENSMPUG00000006399	NCBP1	99	83.270	Mustela_putorius_furo
ENSGAFG00000017787	NCBP1	98	81.620	ENSMLUG00000015201	NCBP1	99	81.748	Myotis_lucifugus
ENSGAFG00000017787	NCBP1	99	82.893	ENSNGAG00000014101	Ncbp1	99	82.893	Nannospalax_galili
ENSGAFG00000017787	NCBP1	76	98.238	ENSNBRG00000014674	NCBP1	97	98.238	Neolamprologus_brichardi
ENSGAFG00000017787	NCBP1	99	82.763	ENSNLEG00000016909	NCBP1	99	82.890	Nomascus_leucogenys
ENSGAFG00000017787	NCBP1	89	81.420	ENSMEUG00000010672	NCBP1	90	81.420	Notamacropus_eugenii
ENSGAFG00000017787	NCBP1	84	75.212	ENSOPRG00000002144	-	88	75.382	Ochotona_princeps
ENSGAFG00000017787	NCBP1	99	82.636	ENSODEG00000003232	NCBP1	99	82.763	Octodon_degus
ENSGAFG00000017787	NCBP1	100	95.477	ENSONIG00000001502	NCBP1	100	95.477	Oreochromis_niloticus
ENSGAFG00000017787	NCBP1	79	85.714	ENSOANG00000001918	NCBP1	100	85.714	Ornithorhynchus_anatinus
ENSGAFG00000017787	NCBP1	98	82.452	ENSOCUG00000013853	NCBP1	97	82.581	Oryctolagus_cuniculus
ENSGAFG00000017787	NCBP1	100	95.000	ENSORLG00000011008	NCBP1	100	95.000	Oryzias_latipes
ENSGAFG00000017787	NCBP1	100	95.250	ENSORLG00020017455	NCBP1	100	95.250	Oryzias_latipes_hni
ENSGAFG00000017787	NCBP1	100	95.125	ENSORLG00015012127	NCBP1	100	95.125	Oryzias_latipes_hsok
ENSGAFG00000017787	NCBP1	100	95.625	ENSOMEG00000020698	NCBP1	100	95.625	Oryzias_melastigma
ENSGAFG00000017787	NCBP1	99	82.680	ENSOGAG00000013888	NCBP1	99	82.807	Otolemur_garnettii
ENSGAFG00000017787	NCBP1	99	82.763	ENSOARG00000011233	NCBP1	99	82.890	Ovis_aries
ENSGAFG00000017787	NCBP1	99	82.763	ENSPPAG00000026462	NCBP1	99	82.890	Pan_paniscus
ENSGAFG00000017787	NCBP1	99	83.016	ENSPPRG00000022574	NCBP1	99	83.143	Panthera_pardus
ENSGAFG00000017787	NCBP1	99	83.016	ENSPTIG00000018507	NCBP1	99	83.143	Panthera_tigris_altaica
ENSGAFG00000017787	NCBP1	99	82.763	ENSPTRG00000021167	NCBP1	99	82.890	Pan_troglodytes
ENSGAFG00000017787	NCBP1	99	82.763	ENSPANG00000025591	NCBP1	99	82.890	Papio_anubis
ENSGAFG00000017787	NCBP1	99	87.925	ENSPKIG00000015861	NCBP1	99	87.799	Paramormyrops_kingsleyae
ENSGAFG00000017787	NCBP1	64	82.617	ENSPSIG00000009558	NCBP1	99	82.617	Pelodiscus_sinensis
ENSGAFG00000017787	NCBP1	100	90.238	ENSPMGG00000020476	NCBP1	100	90.238	Periophthalmus_magnuspinnatus
ENSGAFG00000017787	NCBP1	99	82.129	ENSPEMG00000020105	Ncbp1	99	82.256	Peromyscus_maniculatus_bairdii
ENSGAFG00000017787	NCBP1	99	68.342	ENSPMAG00000005533	NCBP1	99	68.342	Petromyzon_marinus
ENSGAFG00000017787	NCBP1	99	82.465	ENSPCIG00000015800	NCBP1	99	84.141	Phascolarctos_cinereus
ENSGAFG00000017787	NCBP1	100	98.623	ENSPFOG00000004158	NCBP1	100	98.623	Poecilia_formosa
ENSGAFG00000017787	NCBP1	100	99.246	ENSPLAG00000020002	NCBP1	100	99.246	Poecilia_latipinna
ENSGAFG00000017787	NCBP1	100	98.995	ENSPMEG00000019821	NCBP1	100	98.995	Poecilia_mexicana
ENSGAFG00000017787	NCBP1	100	98.620	ENSPREG00000006035	NCBP1	100	98.620	Poecilia_reticulata
ENSGAFG00000017787	NCBP1	99	82.763	ENSPPYG00000019426	NCBP1	99	82.890	Pongo_abelii
ENSGAFG00000017787	NCBP1	90	80.363	ENSPCAG00000009943	NCBP1	90	80.363	Procavia_capensis
ENSGAFG00000017787	NCBP1	82	87.500	ENSPCOG00000020024	NCBP1	98	87.500	Propithecus_coquereli
ENSGAFG00000017787	NCBP1	99	82.636	ENSPVAG00000005924	NCBP1	99	82.763	Pteropus_vampyrus
ENSGAFG00000017787	NCBP1	91	94.175	ENSPNYG00000002140	NCBP1	99	94.250	Pundamilia_nyererei
ENSGAFG00000017787	NCBP1	100	90.476	ENSPNAG00000027753	NCBP1	100	90.476	Pygocentrus_nattereri
ENSGAFG00000017787	NCBP1	99	82.763	ENSRNOG00000023605	Ncbp1	99	82.890	Rattus_norvegicus
ENSGAFG00000017787	NCBP1	99	82.763	ENSRBIG00000043175	NCBP1	99	82.890	Rhinopithecus_bieti
ENSGAFG00000017787	NCBP1	99	82.763	ENSRROG00000029767	NCBP1	99	82.890	Rhinopithecus_roxellana
ENSGAFG00000017787	NCBP1	99	82.763	ENSSBOG00000019378	NCBP1	98	87.561	Saimiri_boliviensis_boliviensis
ENSGAFG00000017787	NCBP1	99	56.274	ENSSHAG00000015882	NCBP1	99	56.218	Sarcophilus_harrisii
ENSGAFG00000017787	NCBP1	98	86.097	ENSSFOG00015001872	NCBP1	99	85.409	Scleropages_formosus
ENSGAFG00000017787	NCBP1	100	93.593	ENSSMAG00000007463	NCBP1	100	93.593	Scophthalmus_maximus
ENSGAFG00000017787	NCBP1	100	95.352	ENSSDUG00000007019	NCBP1	100	96.027	Seriola_dumerili
ENSGAFG00000017787	NCBP1	100	96.231	ENSSLDG00000021924	NCBP1	100	96.231	Seriola_lalandi_dorsalis
ENSGAFG00000017787	NCBP1	85	71.554	ENSSARG00000007274	NCBP1	86	71.772	Sorex_araneus
ENSGAFG00000017787	NCBP1	99	77.107	ENSSPUG00000008609	NCBP1	99	77.186	Sphenodon_punctatus
ENSGAFG00000017787	NCBP1	100	97.236	ENSSPAG00000012550	NCBP1	100	97.236	Stegastes_partitus
ENSGAFG00000017787	NCBP1	99	82.763	ENSSSCG00000005366	NCBP1	99	82.890	Sus_scrofa
ENSGAFG00000017787	NCBP1	99	78.994	ENSTGUG00000001472	NCBP1	99	79.245	Taeniopygia_guttata
ENSGAFG00000017787	NCBP1	100	93.593	ENSTRUG00000005287	NCBP1	100	93.593	Takifugu_rubripes
ENSGAFG00000017787	NCBP1	99	80.355	ENSTBEG00000004035	NCBP1	99	80.482	Tupaia_belangeri
ENSGAFG00000017787	NCBP1	88	84.729	ENSTTRG00000000507	NCBP1	88	84.729	Tursiops_truncatus
ENSGAFG00000017787	NCBP1	99	82.890	ENSUAMG00000005471	NCBP1	99	83.016	Ursus_americanus
ENSGAFG00000017787	NCBP1	97	80.599	ENSUMAG00000011865	NCBP1	99	82.551	Ursus_maritimus
ENSGAFG00000017787	NCBP1	99	79.341	ENSVPAG00000010537	NCBP1	99	79.468	Vicugna_pacos
ENSGAFG00000017787	NCBP1	99	83.016	ENSVVUG00000019725	NCBP1	99	83.143	Vulpes_vulpes
ENSGAFG00000017787	NCBP1	99	79.146	ENSXETG00000010179	ncbp1	99	79.146	Xenopus_tropicalis
ENSGAFG00000017787	NCBP1	100	99.121	ENSXMAG00000018253	NCBP1	100	99.121	Xiphophorus_maculatus