EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000017798 (Gene tree)
Gene ID: -
Gene Symbol: rbm34
Alias: zgc:92062
Full Name: RNA binding motif protein 34
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 7841 bases
Position: chrNHOQ01000347.1:3339472-3347312
Accession: ZDB-GENE-040718-77
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000026353	RRM_1	PF00076.22	5.4e-27	1	2
ENSGAFP00000026353	RRM_1	PF00076.22	5.4e-27	2	2
ENSGAFP00000026354	RRM_1	PF00076.22	8e-27	1	2
ENSGAFP00000026354	RRM_1	PF00076.22	8e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000026624	-	3518	-	ENSGAFP00000026353	414 (aa)	-	-
ENSGAFT00000026625	-	2988	-	ENSGAFP00000026354	448 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000017798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000017798's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000017798	rbm34	78	46.018	ENSG00000188739	RBM34	78	45.455	Homo_sapiens
ENSGAFG00000017798	rbm34	90	62.766	ENSAPOG00000004027	rbm34	93	62.205	Acanthochromis_polyacanthus
ENSGAFG00000017798	rbm34	92	57.506	ENSACIG00000014842	rbm34	85	57.143	Amphilophus_citrinellus
ENSGAFG00000017798	rbm34	94	62.103	ENSAOCG00000006146	rbm34	95	62.347	Amphiprion_ocellaris
ENSGAFG00000017798	rbm34	93	63.265	ENSAPEG00000022105	rbm34	95	61.151	Amphiprion_percula
ENSGAFG00000017798	rbm34	95	60.988	ENSATEG00000016567	rbm34	95	60.891	Anabas_testudineus
ENSGAFG00000017798	rbm34	72	47.386	ENSAPLG00000004344	RBM34	99	46.645	Anas_platyrhynchos
ENSGAFG00000017798	rbm34	79	43.953	ENSACAG00000001253	RBM34	80	43.323	Anolis_carolinensis
ENSGAFG00000017798	rbm34	78	42.254	ENSANAG00000029971	RBM34	79	43.454	Aotus_nancymaae
ENSGAFG00000017798	rbm34	95	61.823	ENSACLG00000026337	rbm34	95	61.975	Astatotilapia_calliptera
ENSGAFG00000017798	rbm34	92	61.929	ENSACLG00000018471	rbm34	80	62.087	Astatotilapia_calliptera
ENSGAFG00000017798	rbm34	90	50.000	ENSAMXG00000021328	rbm34	90	50.125	Astyanax_mexicanus
ENSGAFG00000017798	rbm34	82	42.978	ENSCJAG00000018125	RBM34	83	44.444	Callithrix_jacchus
ENSGAFG00000017798	rbm34	79	42.197	ENSCAFG00000011507	RBM34	88	41.935	Canis_familiaris
ENSGAFG00000017798	rbm34	78	45.190	ENSTSYG00000009942	RBM34	87	42.893	Carlito_syrichta
ENSGAFG00000017798	rbm34	67	39.931	ENSCAPG00000015346	RBM34	77	39.931	Cavia_aperea
ENSGAFG00000017798	rbm34	81	44.507	ENSCPOG00000015213	RBM34	82	43.889	Cavia_porcellus
ENSGAFG00000017798	rbm34	81	42.980	ENSCCAG00000025584	RBM34	81	44.476	Cebus_capucinus
ENSGAFG00000017798	rbm34	78	45.133	ENSCATG00000031771	RBM34	79	46.018	Cercocebus_atys
ENSGAFG00000017798	rbm34	85	43.716	ENSCLAG00000003464	RBM34	89	43.272	Chinchilla_lanigera
ENSGAFG00000017798	rbm34	80	44.380	ENSCSAG00000010079	RBM34	79	45.507	Chlorocebus_sabaeus
ENSGAFG00000017798	rbm34	93	43.392	ENSCPBG00000005460	RBM34	82	43.782	Chrysemys_picta_bellii
ENSGAFG00000017798	rbm34	80	44.380	ENSCANG00000009561	RBM34	80	45.245	Colobus_angolensis_palliatus
ENSGAFG00000017798	rbm34	83	33.609	ENSCGRG00001018721	Rbm34	90	40.856	Cricetulus_griseus_chok1gshd
ENSGAFG00000017798	rbm34	83	38.017	ENSCGRG00000014051	Rbm34	83	37.500	Cricetulus_griseus_crigri
ENSGAFG00000017798	rbm34	94	58.780	ENSCSEG00000000993	rbm34	94	59.512	Cynoglossus_semilaevis
ENSGAFG00000017798	rbm34	100	65.217	ENSCVAG00000018699	rbm34	100	65.217	Cyprinodon_variegatus
ENSGAFG00000017798	rbm34	95	49.265	ENSDARG00000101877	rbm34	100	51.935	Danio_rerio
ENSGAFG00000017798	rbm34	78	46.176	ENSDNOG00000044740	RBM34	79	45.690	Dasypus_novemcinctus
ENSGAFG00000017798	rbm34	69	46.980	ENSDORG00000006420	Rbm34	92	46.980	Dipodomys_ordii
ENSGAFG00000017798	rbm34	57	49.160	ENSEBUG00000012070	rbm34	81	46.154	Eptatretus_burgeri
ENSGAFG00000017798	rbm34	91	35.219	ENSEEUG00000012760	RBM34	89	34.860	Erinaceus_europaeus
ENSGAFG00000017798	rbm34	92	47.208	ENSELUG00000015682	rbm34	91	49.161	Esox_lucius
ENSGAFG00000017798	rbm34	79	43.804	ENSFCAG00000001852	RBM34	79	43.804	Felis_catus
ENSGAFG00000017798	rbm34	73	73.927	ENSFHEG00000010140	rbm34	100	73.927	Fundulus_heteroclitus
ENSGAFG00000017798	rbm34	52	57.009	ENSGMOG00000011683	rbm34	83	57.944	Gadus_morhua
ENSGAFG00000017798	rbm34	52	43.694	ENSGALG00000029915	RBM34	77	43.694	Gallus_gallus
ENSGAFG00000017798	rbm34	95	55.690	ENSGACG00000001040	-	95	56.145	Gasterosteus_aculeatus
ENSGAFG00000017798	rbm34	93	42.394	ENSGAGG00000020598	RBM34	88	44.473	Gopherus_agassizii
ENSGAFG00000017798	rbm34	78	46.608	ENSGGOG00000007924	RBM34	78	46.041	Gorilla_gorilla
ENSGAFG00000017798	rbm34	95	61.823	ENSHBUG00000015508	rbm34	95	61.975	Haplochromis_burtoni
ENSGAFG00000017798	rbm34	82	41.690	ENSHGLG00000016495	RBM34	82	41.972	Heterocephalus_glaber_female
ENSGAFG00000017798	rbm34	82	41.690	ENSHGLG00100014678	RBM34	82	41.972	Heterocephalus_glaber_male
ENSGAFG00000017798	rbm34	91	50.392	ENSIPUG00000021952	rbm34	84	50.806	Ictalurus_punctatus
ENSGAFG00000017798	rbm34	81	44.318	ENSSTOG00000002792	RBM34	82	44.318	Ictidomys_tridecemlineatus
ENSGAFG00000017798	rbm34	74	46.203	ENSJJAG00000021295	Rbm34	81	51.417	Jaculus_jaculus
ENSGAFG00000017798	rbm34	95	61.347	ENSKMAG00000007790	rbm34	96	61.250	Kryptolebias_marmoratus
ENSGAFG00000017798	rbm34	92	59.850	ENSLBEG00000022530	-	94	60.945	Labrus_bergylta
ENSGAFG00000017798	rbm34	92	48.990	ENSLBEG00000028305	rbm34	93	50.126	Labrus_bergylta
ENSGAFG00000017798	rbm34	78	44.798	ENSLACG00000013628	RBM34	87	42.971	Latimeria_chalumnae
ENSGAFG00000017798	rbm34	94	46.588	ENSLOCG00000015902	rbm34	95	46.588	Lepisosteus_oculatus
ENSGAFG00000017798	rbm34	89	43.182	ENSLAFG00000014289	RBM34	89	43.069	Loxodonta_africana
ENSGAFG00000017798	rbm34	78	45.294	ENSMFAG00000038522	RBM34	79	46.176	Macaca_fascicularis
ENSGAFG00000017798	rbm34	78	45.294	ENSMMUG00000039424	RBM34	82	46.176	Macaca_mulatta
ENSGAFG00000017798	rbm34	78	45.294	ENSMNEG00000040149	RBM34	79	46.176	Macaca_nemestrina
ENSGAFG00000017798	rbm34	94	59.901	ENSMAMG00000018828	rbm34	95	60.149	Mastacembelus_armatus
ENSGAFG00000017798	rbm34	56	61.200	ENSMZEG00005010091	-	86	62.449	Maylandia_zebra
ENSGAFG00000017798	rbm34	95	62.069	ENSMZEG00005021586	rbm34	95	62.222	Maylandia_zebra
ENSGAFG00000017798	rbm34	94	43.564	ENSMGAG00000011921	RBM34	95	45.526	Meleagris_gallopavo
ENSGAFG00000017798	rbm34	80	40.541	ENSMICG00000038704	-	80	41.667	Microcebus_murinus
ENSGAFG00000017798	rbm34	79	43.478	ENSMOCG00000013550	Rbm34	80	43.188	Microtus_ochrogaster
ENSGAFG00000017798	rbm34	85	60.393	ENSMMOG00000018675	rbm34	84	60.393	Mola_mola
ENSGAFG00000017798	rbm34	90	39.196	ENSMODG00000008436	RBM34	88	39.196	Monodelphis_domestica
ENSGAFG00000017798	rbm34	91	57.071	ENSMALG00000007816	rbm34	92	58.133	Monopterus_albus
ENSGAFG00000017798	rbm34	83	43.902	MGP_CAROLIEiJ_G0031732	Rbm34	86	43.045	Mus_caroli
ENSGAFG00000017798	rbm34	81	42.896	ENSMUSG00000033931	Rbm34	80	43.923	Mus_musculus
ENSGAFG00000017798	rbm34	82	44.167	MGP_PahariEiJ_G0023329	Rbm34	82	43.889	Mus_pahari
ENSGAFG00000017798	rbm34	81	43.014	MGP_SPRETEiJ_G0032849	Rbm34	80	43.490	Mus_spretus
ENSGAFG00000017798	rbm34	82	42.061	ENSMPUG00000002849	RBM34	83	42.061	Mustela_putorius_furo
ENSGAFG00000017798	rbm34	81	42.857	ENSMLUG00000016224	RBM34	81	43.697	Myotis_lucifugus
ENSGAFG00000017798	rbm34	83	42.179	ENSNGAG00000010712	Rbm34	84	42.179	Nannospalax_galili
ENSGAFG00000017798	rbm34	95	58.911	ENSNBRG00000010975	rbm34	94	59.204	Neolamprologus_brichardi
ENSGAFG00000017798	rbm34	79	44.509	ENSNLEG00000002610	RBM34	80	45.402	Nomascus_leucogenys
ENSGAFG00000017798	rbm34	67	41.786	ENSMEUG00000005465	-	93	41.176	Notamacropus_eugenii
ENSGAFG00000017798	rbm34	52	45.116	ENSOPRG00000013930	RBM34	82	35.457	Ochotona_princeps
ENSGAFG00000017798	rbm34	79	44.477	ENSODEG00000006130	RBM34	87	45.087	Octodon_degus
ENSGAFG00000017798	rbm34	95	61.787	ENSONIG00000018121	rbm34	93	61.940	Oreochromis_niloticus
ENSGAFG00000017798	rbm34	79	43.314	ENSOANG00000001206	RBM34	81	43.516	Ornithorhynchus_anatinus
ENSGAFG00000017798	rbm34	93	41.966	ENSOCUG00000009173	RBM34	92	42.718	Oryctolagus_cuniculus
ENSGAFG00000017798	rbm34	95	58.519	ENSORLG00000001221	rbm34	95	58.911	Oryzias_latipes
ENSGAFG00000017798	rbm34	95	58.374	ENSORLG00020016678	rbm34	95	58.765	Oryzias_latipes_hni
ENSGAFG00000017798	rbm34	95	57.778	ENSORLG00015016039	rbm34	95	58.168	Oryzias_latipes_hsok
ENSGAFG00000017798	rbm34	94	58.250	ENSOMEG00000007902	rbm34	95	59.102	Oryzias_melastigma
ENSGAFG00000017798	rbm34	88	39.386	ENSOGAG00000012470	RBM34	89	39.642	Otolemur_garnettii
ENSGAFG00000017798	rbm34	78	45.588	ENSPPAG00000030692	RBM34	78	45.588	Pan_paniscus
ENSGAFG00000017798	rbm34	79	44.058	ENSPPRG00000013597	RBM34	79	44.092	Panthera_pardus
ENSGAFG00000017798	rbm34	79	43.768	ENSPTIG00000011612	RBM34	79	43.804	Panthera_tigris_altaica
ENSGAFG00000017798	rbm34	78	46.765	ENSPTRG00000048646	-	78	46.199	Pan_troglodytes
ENSGAFG00000017798	rbm34	78	46.765	ENSPTRG00000032432	RBM34	78	46.199	Pan_troglodytes
ENSGAFG00000017798	rbm34	78	45.294	ENSPANG00000010411	RBM34	78	46.176	Papio_anubis
ENSGAFG00000017798	rbm34	94	51.951	ENSPKIG00000009284	rbm34	94	52.184	Paramormyrops_kingsleyae
ENSGAFG00000017798	rbm34	91	41.519	ENSPSIG00000011370	RBM34	86	42.159	Pelodiscus_sinensis
ENSGAFG00000017798	rbm34	85	45.404	ENSPMGG00000001183	rbm34	94	45.767	Periophthalmus_magnuspinnatus
ENSGAFG00000017798	rbm34	81	42.090	ENSPEMG00000000265	Rbm34	82	42.373	Peromyscus_maniculatus_bairdii
ENSGAFG00000017798	rbm34	75	44.578	ENSPMAG00000001602	rbm34	88	44.073	Petromyzon_marinus
ENSGAFG00000017798	rbm34	90	38.404	ENSPCIG00000029736	-	74	38.653	Phascolarctos_cinereus
ENSGAFG00000017798	rbm34	100	90.821	ENSPFOG00000009829	-	100	90.821	Poecilia_formosa
ENSGAFG00000017798	rbm34	95	91.071	ENSPLAG00000018385	-	98	91.176	Poecilia_latipinna
ENSGAFG00000017798	rbm34	98	77.641	ENSPMEG00000014440	-	99	77.641	Poecilia_mexicana
ENSGAFG00000017798	rbm34	94	91.026	ENSPREG00000023227	rbm34	100	90.843	Poecilia_reticulata
ENSGAFG00000017798	rbm34	78	45.428	ENSPPYG00000029513	RBM34	78	45.428	Pongo_abelii
ENSGAFG00000017798	rbm34	80	40.870	ENSPCOG00000018448	RBM34	79	42.241	Propithecus_coquereli
ENSGAFG00000017798	rbm34	78	46.041	ENSPVAG00000015158	RBM34	81	45.821	Pteropus_vampyrus
ENSGAFG00000017798	rbm34	95	61.823	ENSPNYG00000004970	rbm34	95	61.975	Pundamilia_nyererei
ENSGAFG00000017798	rbm34	92	48.010	ENSPNAG00000002639	rbm34	82	51.944	Pygocentrus_nattereri
ENSGAFG00000017798	rbm34	83	42.779	ENSRNOG00000020004	Rbm34	84	42.779	Rattus_norvegicus
ENSGAFG00000017798	rbm34	78	45.000	ENSRBIG00000032900	RBM34	78	46.041	Rhinopithecus_bieti
ENSGAFG00000017798	rbm34	78	45.000	ENSRROG00000039131	RBM34	78	46.041	Rhinopithecus_roxellana
ENSGAFG00000017798	rbm34	90	39.259	ENSSHAG00000015812	RBM34	78	41.667	Sarcophilus_harrisii
ENSGAFG00000017798	rbm34	94	48.301	ENSSFOG00015000148	rbm34	95	48.301	Scleropages_formosus
ENSGAFG00000017798	rbm34	93	59.850	ENSSMAG00000020955	rbm34	93	59.750	Scophthalmus_maximus
ENSGAFG00000017798	rbm34	95	60.000	ENSSDUG00000019237	rbm34	95	60.391	Seriola_dumerili
ENSGAFG00000017798	rbm34	95	56.511	ENSSLDG00000000796	rbm34	95	56.897	Seriola_lalandi_dorsalis
ENSGAFG00000017798	rbm34	95	41.422	ENSSPUG00000015430	RBM34	79	46.726	Sphenodon_punctatus
ENSGAFG00000017798	rbm34	95	63.433	ENSSPAG00000010174	rbm34	95	63.840	Stegastes_partitus
ENSGAFG00000017798	rbm34	82	60.465	ENSTRUG00000011172	rbm34	86	60.465	Takifugu_rubripes
ENSGAFG00000017798	rbm34	81	51.233	ENSTNIG00000001302	-	92	52.486	Tetraodon_nigroviridis
ENSGAFG00000017798	rbm34	82	46.491	ENSXETG00000023721	rbm34	83	45.507	Xenopus_tropicalis
ENSGAFG00000017798	rbm34	98	79.167	ENSXCOG00000011190	RBM34	99	79.167	Xiphophorus_couchianus
ENSGAFG00000017798	rbm34	100	94.203	ENSXMAG00000029852	rbm34	100	94.203	Xiphophorus_maculatus