EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000017827 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 11379 bases
Position: chrNHOQ01001229.1:468105-479483
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000026395	FAM83	PF07894.12	1.1e-98	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000026666	-	7608	-	ENSGAFP00000026395	1749 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000017827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000017827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000017827	-	51	42.375	ENSGAFG00000011105	fam83hb	85	42.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000017827	-	59	40.486	ENSAPOG00000009257	fam83hb	84	41.435	Acanthochromis_polyacanthus
ENSGAFG00000017827	-	96	62.930	ENSAPOG00000000745	-	53	63.274	Acanthochromis_polyacanthus
ENSGAFG00000017827	-	50	50.704	ENSACIG00000011141	fam83hb	84	40.000	Amphilophus_citrinellus
ENSGAFG00000017827	-	51	61.326	ENSACIG00000004226	-	50	61.657	Amphilophus_citrinellus
ENSGAFG00000017827	-	58	40.506	ENSAOCG00000007284	fam83hb	84	41.108	Amphiprion_ocellaris
ENSGAFG00000017827	-	99	59.462	ENSAOCG00000004401	-	100	59.881	Amphiprion_ocellaris
ENSGAFG00000017827	-	99	59.502	ENSAPEG00000024662	-	100	59.921	Amphiprion_percula
ENSGAFG00000017827	-	58	40.764	ENSAPEG00000012397	fam83hb	84	41.108	Amphiprion_percula
ENSGAFG00000017827	-	58	39.739	ENSATEG00000014310	fam83hb	83	40.194	Anabas_testudineus
ENSGAFG00000017827	-	71	57.816	ENSACLG00000021078	-	66	57.974	Astatotilapia_calliptera
ENSGAFG00000017827	-	56	45.528	ENSACLG00000017085	fam83hb	83	41.358	Astatotilapia_calliptera
ENSGAFG00000017827	-	58	43.454	ENSAMXG00000020626	fam83hb	83	43.454	Astyanax_mexicanus
ENSGAFG00000017827	-	54	46.429	ENSAMXG00000003637	-	85	46.429	Astyanax_mexicanus
ENSGAFG00000017827	-	59	39.429	ENSCSEG00000018065	fam83hb	84	39.727	Cynoglossus_semilaevis
ENSGAFG00000017827	-	58	56.776	ENSCSEG00000017411	-	96	56.834	Cynoglossus_semilaevis
ENSGAFG00000017827	-	100	73.214	ENSCVAG00000004532	-	85	73.214	Cyprinodon_variegatus
ENSGAFG00000017827	-	58	42.675	ENSCVAG00000020763	fam83hb	84	42.675	Cyprinodon_variegatus
ENSGAFG00000017827	-	58	43.333	ENSDARG00000060830	fam83hb	84	43.415	Danio_rerio
ENSGAFG00000017827	-	54	52.448	ENSELUG00000021435	-	83	52.448	Esox_lucius
ENSGAFG00000017827	-	55	47.664	ENSELUG00000001087	fam83hb	78	47.664	Esox_lucius
ENSGAFG00000017827	-	59	40.381	ENSFHEG00000013522	fam83hb	83	41.898	Fundulus_heteroclitus
ENSGAFG00000017827	-	100	64.689	ENSFHEG00000019359	-	100	64.859	Fundulus_heteroclitus
ENSGAFG00000017827	-	54	48.515	ENSHBUG00000003140	fam83hb	83	41.358	Haplochromis_burtoni
ENSGAFG00000017827	-	70	58.507	ENSHBUG00000011170	-	68	58.507	Haplochromis_burtoni
ENSGAFG00000017827	-	62	61.765	ENSHCOG00000004219	-	68	61.765	Hippocampus_comes
ENSGAFG00000017827	-	57	41.491	ENSHCOG00000019264	fam83hb	83	41.491	Hippocampus_comes
ENSGAFG00000017827	-	58	43.315	ENSIPUG00000020131	fam83h	82	44.085	Ictalurus_punctatus
ENSGAFG00000017827	-	90	55.403	ENSKMAG00000008619	-	99	55.575	Kryptolebias_marmoratus
ENSGAFG00000017827	-	58	41.953	ENSKMAG00000006085	fam83hb	83	42.350	Kryptolebias_marmoratus
ENSGAFG00000017827	-	50	39.426	ENSLBEG00000003167	fam83hb	71	40.689	Labrus_bergylta
ENSGAFG00000017827	-	66	56.823	ENSLBEG00000017805	-	77	56.823	Labrus_bergylta
ENSGAFG00000017827	-	58	42.778	ENSLOCG00000005513	fam83hb	86	43.000	Lepisosteus_oculatus
ENSGAFG00000017827	-	97	58.155	ENSMAMG00000015417	-	100	58.155	Mastacembelus_armatus
ENSGAFG00000017827	-	71	57.816	ENSMZEG00005011038	-	66	57.974	Maylandia_zebra
ENSGAFG00000017827	-	56	45.528	ENSMZEG00005004572	fam83hb	83	41.358	Maylandia_zebra
ENSGAFG00000017827	-	50	38.039	ENSMGAG00000013067	FAM83H	78	38.039	Meleagris_gallopavo
ENSGAFG00000017827	-	51	75.510	ENSMMOG00000008508	-	82	75.701	Mola_mola
ENSGAFG00000017827	-	55	44.000	ENSMMOG00000019073	fam83hb	84	40.874	Mola_mola
ENSGAFG00000017827	-	54	40.541	ENSMALG00000014368	fam83hb	81	41.498	Monopterus_albus
ENSGAFG00000017827	-	58	57.143	ENSMALG00000007504	-	80	57.143	Monopterus_albus
ENSGAFG00000017827	-	54	48.515	ENSNBRG00000012168	fam83hb	81	43.769	Neolamprologus_brichardi
ENSGAFG00000017827	-	51	57.451	ENSNBRG00000016501	-	69	57.451	Neolamprologus_brichardi
ENSGAFG00000017827	-	54	48.515	ENSONIG00000002496	fam83hb	85	40.994	Oreochromis_niloticus
ENSGAFG00000017827	-	50	40.821	ENSORLG00000029070	fam83hb	73	41.568	Oryzias_latipes
ENSGAFG00000017827	-	58	69.792	ENSORLG00000029445	-	69	69.792	Oryzias_latipes
ENSGAFG00000017827	-	50	40.642	ENSORLG00020005821	fam83hb	73	41.089	Oryzias_latipes_hni
ENSGAFG00000017827	-	57	68.817	ENSORLG00020005552	-	69	68.085	Oryzias_latipes_hni
ENSGAFG00000017827	-	57	70.213	ENSORLG00015020652	-	69	70.213	Oryzias_latipes_hsok
ENSGAFG00000017827	-	50	40.665	ENSORLG00015013524	fam83hb	73	41.239	Oryzias_latipes_hsok
ENSGAFG00000017827	-	55	71.277	ENSOMEG00000017183	-	66	71.277	Oryzias_melastigma
ENSGAFG00000017827	-	56	43.955	ENSPKIG00000011416	fam83hb	81	43.955	Paramormyrops_kingsleyae
ENSGAFG00000017827	-	68	45.802	ENSPKIG00000021594	-	75	45.802	Paramormyrops_kingsleyae
ENSGAFG00000017827	-	57	56.716	ENSPMGG00000022601	-	89	53.201	Periophthalmus_magnuspinnatus
ENSGAFG00000017827	-	55	46.739	ENSPMGG00000001766	fam83hb	84	39.282	Periophthalmus_magnuspinnatus
ENSGAFG00000017827	-	56	91.556	ENSPFOG00000013288	-	94	91.887	Poecilia_formosa
ENSGAFG00000017827	-	78	90.265	ENSPLAG00000022026	-	99	90.265	Poecilia_latipinna
ENSGAFG00000017827	-	100	87.365	ENSPMEG00000020860	-	100	87.479	Poecilia_mexicana
ENSGAFG00000017827	-	100	88.413	ENSPREG00000001508	-	100	88.470	Poecilia_reticulata
ENSGAFG00000017827	-	74	56.112	ENSPNYG00000012210	-	67	56.112	Pundamilia_nyererei
ENSGAFG00000017827	-	54	48.515	ENSPNYG00000010992	fam83hb	83	41.358	Pundamilia_nyererei
ENSGAFG00000017827	-	59	43.929	ENSPNAG00000026242	fam83hb	85	43.929	Pygocentrus_nattereri
ENSGAFG00000017827	-	65	48.485	ENSSFOG00015007757	-	68	48.485	Scleropages_formosus
ENSGAFG00000017827	-	55	54.955	ENSSFOG00015020932	fam83h	84	43.694	Scleropages_formosus
ENSGAFG00000017827	-	99	59.939	ENSSMAG00000012479	-	100	59.939	Scophthalmus_maximus
ENSGAFG00000017827	-	58	41.514	ENSSDUG00000010634	fam83hb	84	42.434	Seriola_dumerili
ENSGAFG00000017827	-	99	60.316	ENSSDUG00000005051	-	61	60.316	Seriola_dumerili
ENSGAFG00000017827	-	69	60.178	ENSSLDG00000023360	-	99	60.178	Seriola_lalandi_dorsalis
ENSGAFG00000017827	-	52	43.681	ENSSLDG00000012462	fam83hb	84	43.122	Seriola_lalandi_dorsalis
ENSGAFG00000017827	-	52	55.450	ENSSPAG00000015180	fam83hb	76	55.450	Stegastes_partitus
ENSGAFG00000017827	-	96	63.916	ENSSPAG00000021937	-	100	63.916	Stegastes_partitus
ENSGAFG00000017827	-	51	56.703	ENSTRUG00000024578	-	88	57.895	Takifugu_rubripes
ENSGAFG00000017827	-	60	39.979	ENSTRUG00000009193	fam83hb	87	40.191	Takifugu_rubripes
ENSGAFG00000017827	-	51	39.838	ENSXETG00000005283	fam83h	80	38.173	Xenopus_tropicalis
ENSGAFG00000017827	-	58	41.667	ENSXCOG00000020106	fam83hb	84	41.667	Xiphophorus_couchianus
ENSGAFG00000017827	-	84	94.079	ENSXCOG00000005364	-	96	94.079	Xiphophorus_couchianus
ENSGAFG00000017827	-	58	42.308	ENSXMAG00000003383	fam83hb	85	42.308	Xiphophorus_maculatus
ENSGAFG00000017827	-	100	91.577	ENSXMAG00000026782	-	100	91.975	Xiphophorus_maculatus