EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000017864 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: zgc:110045
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 6623 bases
Position: chrNHOQ01001229.1:656680-663302
Accession: ZDB-GENE-050706-149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000026452	KH_1	PF00013.29	2e-36	1	2
ENSGAFP00000026452	KH_1	PF00013.29	2e-36	2	2
ENSGAFP00000026452	KH_2	PF07650.17	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000026725	-	684	-	ENSGAFP00000026452	227 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000017864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000017864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000017864	zgc:110045	68	30.000	ENSGAFG00000006445	igf2bp1	78	30.000
ENSGAFG00000017864	zgc:110045	93	71.429	ENSGAFG00000007972	pcbp2	92	76.471
ENSGAFG00000017864	zgc:110045	68	38.710	ENSGAFG00000003656	-	54	38.710
ENSGAFG00000017864	zgc:110045	78	30.216	ENSGAFG00000010840	FUBP3	60	30.216
ENSGAFG00000017864	zgc:110045	92	63.596	ENSGAFG00000021090	-	60	63.596
ENSGAFG00000017864	zgc:110045	79	73.649	ENSGAFG00000018301	pcbp4	61	73.649
ENSGAFG00000017864	zgc:110045	64	32.215	ENSGAFG00000020972	fubp1	54	32.215
ENSGAFG00000017864	zgc:110045	69	41.818	ENSGAFG00000010504	igf2bp2b	60	34.752
ENSGAFG00000017864	zgc:110045	91	78.155	ENSGAFG00000010274	-	80	78.155
ENSGAFG00000017864	zgc:110045	91	65.179	ENSGAFG00000011430	pcbp3	81	65.179
ENSGAFG00000017864	zgc:110045	94	71.963	ENSGAFG00000013273	PCBP2	92	73.301
ENSGAFG00000017864	zgc:110045	76	34.507	ENSGAFG00000017992	igf2bp3	54	34.507
ENSGAFG00000017864	zgc:110045	75	38.462	ENSGAFG00000013791	hnrnpk	56	36.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000017864	zgc:110045	93	77.725	ENSG00000183570	PCBP3	89	70.874	Homo_sapiens
ENSGAFG00000017864	zgc:110045	96	96.789	ENSAPOG00000023735	zgc:110045	94	96.789	Acanthochromis_polyacanthus
ENSGAFG00000017864	zgc:110045	96	93.088	ENSACIG00000002577	zgc:110045	99	93.088	Amphilophus_citrinellus
ENSGAFG00000017864	zgc:110045	89	93.532	ENSAOCG00000005266	zgc:110045	94	93.532	Amphiprion_ocellaris
ENSGAFG00000017864	zgc:110045	96	95.872	ENSAPEG00000000729	zgc:110045	73	95.872	Amphiprion_percula
ENSGAFG00000017864	zgc:110045	80	97.170	ENSATEG00000011191	zgc:110045	65	97.170	Anabas_testudineus
ENSGAFG00000017864	zgc:110045	96	96.330	ENSACLG00000019285	zgc:110045	73	96.330	Astatotilapia_calliptera
ENSGAFG00000017864	zgc:110045	93	77.725	ENSBTAG00000030775	PCBP3	76	77.725	Bos_taurus
ENSGAFG00000017864	zgc:110045	93	77.725	ENSCAFG00000011907	PCBP3	73	79.126	Canis_familiaris
ENSGAFG00000017864	zgc:110045	91	75.243	ENSCHIG00000015841	PCBP3	71	75.243	Capra_hircus
ENSGAFG00000017864	zgc:110045	95	69.658	ENSTSYG00000005254	PCBP3	92	69.658	Carlito_syrichta
ENSGAFG00000017864	zgc:110045	93	54.245	ENSCAPG00000006767	PCBP3	65	54.245	Cavia_aperea
ENSGAFG00000017864	zgc:110045	91	79.126	ENSCPOG00000003648	PCBP3	73	79.126	Cavia_porcellus
ENSGAFG00000017864	zgc:110045	93	77.725	ENSCCAG00000024561	PCBP3	77	77.725	Cebus_capucinus
ENSGAFG00000017864	zgc:110045	93	77.725	ENSCATG00000038419	PCBP3	76	77.725	Cercocebus_atys
ENSGAFG00000017864	zgc:110045	91	79.126	ENSCLAG00000006667	PCBP3	73	79.126	Chinchilla_lanigera
ENSGAFG00000017864	zgc:110045	93	77.725	ENSCANG00000026757	PCBP3	76	77.725	Colobus_angolensis_palliatus
ENSGAFG00000017864	zgc:110045	91	79.126	ENSCGRG00001006836	Pcbp3	73	79.126	Cricetulus_griseus_chok1gshd
ENSGAFG00000017864	zgc:110045	91	79.126	ENSCGRG00000001837	Pcbp3	73	79.126	Cricetulus_griseus_crigri
ENSGAFG00000017864	zgc:110045	95	96.279	ENSCSEG00000010020	zgc:110045	98	94.954	Cynoglossus_semilaevis
ENSGAFG00000017864	zgc:110045	92	91.866	ENSCVAG00000004726	zgc:110045	93	91.866	Cyprinodon_variegatus
ENSGAFG00000017864	zgc:110045	96	80.645	ENSDARG00000057141	zgc:110045	97	80.645	Danio_rerio
ENSGAFG00000017864	zgc:110045	93	77.725	ENSDNOG00000049518	PCBP3	72	77.725	Dasypus_novemcinctus
ENSGAFG00000017864	zgc:110045	91	71.111	ENSDORG00000003640	Pcbp3	91	71.111	Dipodomys_ordii
ENSGAFG00000017864	zgc:110045	89	76.119	ENSEBUG00000009697	zgc:110045	89	75.000	Eptatretus_burgeri
ENSGAFG00000017864	zgc:110045	91	78.641	ENSEASG00005007068	PCBP3	75	78.641	Equus_asinus_asinus
ENSGAFG00000017864	zgc:110045	91	78.641	ENSECAG00000012413	PCBP3	75	78.641	Equus_caballus
ENSGAFG00000017864	zgc:110045	96	86.364	ENSELUG00000019784	zgc:110045	73	86.364	Esox_lucius
ENSGAFG00000017864	zgc:110045	93	77.725	ENSFCAG00000014812	PCBP3	76	77.725	Felis_catus
ENSGAFG00000017864	zgc:110045	91	79.126	ENSFDAG00000009117	PCBP3	75	79.126	Fukomys_damarensis
ENSGAFG00000017864	zgc:110045	89	94.527	ENSFHEG00000018838	-	92	94.527	Fundulus_heteroclitus
ENSGAFG00000017864	zgc:110045	92	89.202	ENSGMOG00000005953	zgc:110045	65	89.202	Gadus_morhua
ENSGAFG00000017864	zgc:110045	95	93.981	ENSGACG00000003044	zgc:110045	94	93.981	Gasterosteus_aculeatus
ENSGAFG00000017864	zgc:110045	93	77.725	ENSGGOG00000003683	PCBP3	76	77.725	Gorilla_gorilla
ENSGAFG00000017864	zgc:110045	96	96.330	ENSHBUG00000012495	zgc:110045	94	96.330	Haplochromis_burtoni
ENSGAFG00000017864	zgc:110045	91	79.126	ENSHGLG00000018620	PCBP3	71	79.126	Heterocephalus_glaber_female
ENSGAFG00000017864	zgc:110045	91	79.126	ENSHGLG00100013590	PCBP3	71	79.126	Heterocephalus_glaber_male
ENSGAFG00000017864	zgc:110045	96	89.450	ENSHCOG00000000818	zgc:110045	99	89.450	Hippocampus_comes
ENSGAFG00000017864	zgc:110045	96	77.523	ENSIPUG00000003932	zgc:110045	81	77.523	Ictalurus_punctatus
ENSGAFG00000017864	zgc:110045	91	79.126	ENSSTOG00000007178	PCBP3	73	79.126	Ictidomys_tridecemlineatus
ENSGAFG00000017864	zgc:110045	91	79.126	ENSJJAG00000021192	Pcbp3	71	79.126	Jaculus_jaculus
ENSGAFG00000017864	zgc:110045	86	95.385	ENSKMAG00000016179	-	95	95.385	Kryptolebias_marmoratus
ENSGAFG00000017864	zgc:110045	100	85.470	ENSLBEG00000023074	zgc:110045	84	96.133	Labrus_bergylta
ENSGAFG00000017864	zgc:110045	91	76.214	ENSLAFG00000020835	PCBP3	79	76.214	Loxodonta_africana
ENSGAFG00000017864	zgc:110045	93	77.725	ENSMFAG00000034574	PCBP3	76	77.725	Macaca_fascicularis
ENSGAFG00000017864	zgc:110045	93	77.725	ENSMMUG00000003825	PCBP3	93	65.289	Macaca_mulatta
ENSGAFG00000017864	zgc:110045	93	77.725	ENSMNEG00000035551	PCBP3	82	79.126	Macaca_nemestrina
ENSGAFG00000017864	zgc:110045	93	77.725	ENSMLEG00000038785	PCBP3	76	77.725	Mandrillus_leucophaeus
ENSGAFG00000017864	zgc:110045	96	94.495	ENSMAMG00000014389	zgc:110045	97	94.495	Mastacembelus_armatus
ENSGAFG00000017864	zgc:110045	96	96.330	ENSMZEG00005011785	zgc:110045	73	96.330	Maylandia_zebra
ENSGAFG00000017864	zgc:110045	91	79.126	ENSMAUG00000007036	Pcbp3	73	79.126	Mesocricetus_auratus
ENSGAFG00000017864	zgc:110045	93	77.251	ENSMICG00000012679	PCBP3	76	77.251	Microcebus_murinus
ENSGAFG00000017864	zgc:110045	91	79.126	ENSMOCG00000016127	Pcbp3	73	79.126	Microtus_ochrogaster
ENSGAFG00000017864	zgc:110045	89	90.050	ENSMMOG00000008399	zgc:110045	95	90.050	Mola_mola
ENSGAFG00000017864	zgc:110045	88	89.950	ENSMALG00000008763	zgc:110045	96	89.950	Monopterus_albus
ENSGAFG00000017864	zgc:110045	93	77.830	MGP_CAROLIEiJ_G0015475	Pcbp3	92	77.830	Mus_caroli
ENSGAFG00000017864	zgc:110045	93	77.830	ENSMUSG00000001120	Pcbp3	92	77.830	Mus_musculus
ENSGAFG00000017864	zgc:110045	93	77.830	MGP_PahariEiJ_G0030889	Pcbp3	92	77.830	Mus_pahari
ENSGAFG00000017864	zgc:110045	93	77.830	MGP_SPRETEiJ_G0016288	Pcbp3	92	77.830	Mus_spretus
ENSGAFG00000017864	zgc:110045	91	79.126	ENSMLUG00000003074	PCBP3	80	79.126	Myotis_lucifugus
ENSGAFG00000017864	zgc:110045	91	79.126	ENSNGAG00000005416	Pcbp3	73	79.126	Nannospalax_galili
ENSGAFG00000017864	zgc:110045	96	96.330	ENSNBRG00000017646	zgc:110045	73	96.330	Neolamprologus_brichardi
ENSGAFG00000017864	zgc:110045	93	77.725	ENSNLEG00000002639	PCBP3	76	77.725	Nomascus_leucogenys
ENSGAFG00000017864	zgc:110045	92	73.128	ENSMEUG00000012960	PCBP3	63	73.128	Notamacropus_eugenii
ENSGAFG00000017864	zgc:110045	91	75.243	ENSODEG00000012873	PCBP3	71	75.243	Octodon_degus
ENSGAFG00000017864	zgc:110045	96	96.330	ENSONIG00000010370	zgc:110045	77	96.330	Oreochromis_niloticus
ENSGAFG00000017864	zgc:110045	91	74.107	ENSOANG00000006265	PCBP3	79	74.107	Ornithorhynchus_anatinus
ENSGAFG00000017864	zgc:110045	96	96.330	ENSORLG00000014385	-	50	96.330	Oryzias_latipes
ENSGAFG00000017864	zgc:110045	96	95.872	ENSORLG00020003139	zgc:110045	90	93.151	Oryzias_latipes_hni
ENSGAFG00000017864	zgc:110045	96	95.872	ENSOMEG00000015459	-	50	95.872	Oryzias_melastigma
ENSGAFG00000017864	zgc:110045	93	73.460	ENSOARG00000012704	PCBP3	73	73.460	Ovis_aries
ENSGAFG00000017864	zgc:110045	93	77.725	ENSPPAG00000021940	PCBP3	76	77.725	Pan_paniscus
ENSGAFG00000017864	zgc:110045	93	77.725	ENSPPRG00000003933	PCBP3	76	77.725	Panthera_pardus
ENSGAFG00000017864	zgc:110045	93	57.009	ENSPTIG00000012038	PCBP3	83	73.810	Panthera_tigris_altaica
ENSGAFG00000017864	zgc:110045	93	47.393	ENSPTRG00000014010	PCBP3	79	44.783	Pan_troglodytes
ENSGAFG00000017864	zgc:110045	93	77.725	ENSPANG00000023631	PCBP3	76	77.725	Papio_anubis
ENSGAFG00000017864	zgc:110045	95	58.986	ENSPMGG00000022531	-	96	58.986	Periophthalmus_magnuspinnatus
ENSGAFG00000017864	zgc:110045	91	79.126	ENSPEMG00000000587	Pcbp3	73	79.126	Peromyscus_maniculatus_bairdii
ENSGAFG00000017864	zgc:110045	66	72.269	ENSPMAG00000004719	zgc:110045	93	72.269	Petromyzon_marinus
ENSGAFG00000017864	zgc:110045	95	98.605	ENSPFOG00000002348	zgc:110045	93	98.605	Poecilia_formosa
ENSGAFG00000017864	zgc:110045	100	95.595	ENSPLAG00000017488	zgc:110045	100	95.595	Poecilia_latipinna
ENSGAFG00000017864	zgc:110045	100	100.000	ENSPMEG00000012762	zgc:110045	100	100.000	Poecilia_mexicana
ENSGAFG00000017864	zgc:110045	98	96.861	ENSPREG00000001797	zgc:110045	98	96.861	Poecilia_reticulata
ENSGAFG00000017864	zgc:110045	88	77.895	ENSPPYG00000011525	-	68	77.895	Pongo_abelii
ENSGAFG00000017864	zgc:110045	91	59.111	ENSPCAG00000001454	PCBP3	65	59.111	Procavia_capensis
ENSGAFG00000017864	zgc:110045	93	77.251	ENSPCOG00000013797	PCBP3	76	77.251	Propithecus_coquereli
ENSGAFG00000017864	zgc:110045	93	71.179	ENSPVAG00000000832	PCBP3	63	71.179	Pteropus_vampyrus
ENSGAFG00000017864	zgc:110045	96	93.548	ENSPNYG00000004637	zgc:110045	99	93.548	Pundamilia_nyererei
ENSGAFG00000017864	zgc:110045	96	81.106	ENSPNAG00000004501	zgc:110045	97	81.106	Pygocentrus_nattereri
ENSGAFG00000017864	zgc:110045	93	77.725	ENSRROG00000034567	PCBP3	76	77.725	Rhinopithecus_roxellana
ENSGAFG00000017864	zgc:110045	93	77.725	ENSSBOG00000005789	PCBP3	76	77.725	Saimiri_boliviensis_boliviensis
ENSGAFG00000017864	zgc:110045	95	97.209	ENSSMAG00000013541	zgc:110045	91	97.209	Scophthalmus_maximus
ENSGAFG00000017864	zgc:110045	90	96.124	ENSSDUG00000019371	zgc:110045	66	96.124	Seriola_dumerili
ENSGAFG00000017864	zgc:110045	96	96.330	ENSSLDG00000021064	zgc:110045	73	96.330	Seriola_lalandi_dorsalis
ENSGAFG00000017864	zgc:110045	60	79.562	ENSSARG00000007629	-	68	79.562	Sorex_araneus
ENSGAFG00000017864	zgc:110045	96	96.789	ENSSPAG00000000563	zgc:110045	94	96.789	Stegastes_partitus
ENSGAFG00000017864	zgc:110045	91	79.126	ENSSSCG00000023041	PCBP3	75	79.126	Sus_scrofa
ENSGAFG00000017864	zgc:110045	88	92.462	ENSTRUG00000017789	zgc:110045	98	92.462	Takifugu_rubripes
ENSGAFG00000017864	zgc:110045	84	86.082	ENSTNIG00000003546	zgc:110045	96	86.082	Tetraodon_nigroviridis
ENSGAFG00000017864	zgc:110045	91	57.767	ENSTBEG00000011882	-	63	57.767	Tupaia_belangeri
ENSGAFG00000017864	zgc:110045	91	75.243	ENSUAMG00000006491	PCBP3	92	66.667	Ursus_americanus
ENSGAFG00000017864	zgc:110045	83	71.574	ENSUMAG00000025403	PCBP3	72	71.574	Ursus_maritimus
ENSGAFG00000017864	zgc:110045	93	72.512	ENSVVUG00000023862	PCBP3	53	76.882	Vulpes_vulpes
ENSGAFG00000017864	zgc:110045	75	95.322	ENSXCOG00000005968	zgc:110045	87	95.322	Xiphophorus_couchianus
ENSGAFG00000017864	zgc:110045	96	98.624	ENSXMAG00000008030	zgc:110045	71	98.624	Xiphophorus_maculatus