EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000018063 (Gene tree)
Gene ID: -
Gene Symbol: GFI1 (1 of many)
Alias: GFI-1|GFI1A|ZNF163
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 6146 bases
Position: chrNHOQ01002897.1:976293-982438
Accession: 4237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000026735	zf-C2H2	PF00096.26	5.9e-25	1	5
ENSGAFP00000026735	zf-C2H2	PF00096.26	5.9e-25	2	5
ENSGAFP00000026735	zf-C2H2	PF00096.26	5.9e-25	3	5
ENSGAFP00000026735	zf-C2H2	PF00096.26	5.9e-25	4	5
ENSGAFP00000026735	zf-C2H2	PF00096.26	5.9e-25	5	5
ENSGAFP00000026735	zf-met	PF12874.7	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000027009	GFI1 (1 of many)-201	1888	-	ENSGAFP00000026735	401 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000018063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000018063's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000018063	GFI1	51	42.282	ENSGAFG00000016587	-	86	42.282
ENSGAFG00000018063	GFI1	65	47.273	ENSGAFG00000013677	-	85	47.273
ENSGAFG00000018063	GFI1	57	44.526	ENSGAFG00000012054	-	58	39.706
ENSGAFG00000018063	GFI1	53	45.802	ENSGAFG00000013969	-	92	52.336
ENSGAFG00000018063	GFI1	58	40.441	ENSGAFG00000020507	-	61	40.441
ENSGAFG00000018063	GFI1	70	44.444	ENSGAFG00000013366	-	60	44.444
ENSGAFG00000018063	GFI1	69	39.884	ENSGAFG00000020503	-	50	43.931
ENSGAFG00000018063	GFI1	50	42.857	ENSGAFG00000011965	-	81	42.857
ENSGAFG00000018063	GFI1	84	43.114	ENSGAFG00000014419	-	61	45.299
ENSGAFG00000018063	GFI1	59	44.000	ENSGAFG00000014188	-	99	41.875
ENSGAFG00000018063	GFI1	54	38.144	ENSGAFG00000016322	-	70	38.144
ENSGAFG00000018063	GFI1	59	44.643	ENSGAFG00000016976	-	60	44.643
ENSGAFG00000018063	GFI1	100	61.259	ENSGAFG00000016637	gfi1ab	100	59.069
ENSGAFG00000018063	GFI1	58	41.667	ENSGAFG00000013019	-	88	38.947
ENSGAFG00000018063	GFI1	55	42.500	ENSGAFG00000013605	-	96	42.500
ENSGAFG00000018063	GFI1	51	46.491	ENSGAFG00000013934	-	99	42.105
ENSGAFG00000018063	GFI1	50	40.367	ENSGAFG00000005337	-	71	40.876
ENSGAFG00000018063	GFI1	56	40.909	ENSGAFG00000012977	-	87	40.909
ENSGAFG00000018063	GFI1	51	43.452	ENSGAFG00000011326	-	94	43.195
ENSGAFG00000018063	GFI1	53	37.419	ENSGAFG00000007110	-	69	37.419
ENSGAFG00000018063	GFI1	50	45.977	ENSGAFG00000012767	-	74	45.977

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000018063	GFI1	100	60.789	ENSG00000162676	GFI1	100	60.373	Homo_sapiens
ENSGAFG00000018063	GFI1	100	62.379	ENSAPOG00000015189	gfi1ab	100	60.688	Acanthochromis_polyacanthus
ENSGAFG00000018063	GFI1	100	62.044	ENSACIG00000016354	gfi1ab	100	60.732	Amphilophus_citrinellus
ENSGAFG00000018063	GFI1	100	53.641	ENSAOCG00000008339	gfi1ab	100	52.206	Amphiprion_ocellaris
ENSGAFG00000018063	GFI1	100	62.621	ENSAPEG00000023870	gfi1ab	100	61.179	Amphiprion_percula
ENSGAFG00000018063	GFI1	100	59.113	ENSATEG00000009167	gfi1ab	89	58.867	Anabas_testudineus
ENSGAFG00000018063	GFI1	82	62.611	ENSAPLG00000015700	GFI1	86	66.007	Anas_platyrhynchos
ENSGAFG00000018063	GFI1	100	60.817	ENSACAG00000004498	GFI1	100	60.096	Anolis_carolinensis
ENSGAFG00000018063	GFI1	100	58.202	ENSANAG00000019656	GFI1	100	59.861	Aotus_nancymaae
ENSGAFG00000018063	GFI1	100	61.800	ENSACLG00000026458	gfi1ab	93	60.671	Astatotilapia_calliptera
ENSGAFG00000018063	GFI1	83	72.973	ENSAMXG00000006669	GFI1	100	72.973	Astyanax_mexicanus
ENSGAFG00000018063	GFI1	100	60.244	ENSAMXG00000039600	gfi1ab	100	57.457	Astyanax_mexicanus
ENSGAFG00000018063	GFI1	100	56.125	ENSBTAG00000016723	GFI1	100	58.005	Bos_taurus
ENSGAFG00000018063	GFI1	100	59.861	ENSCJAG00000017609	GFI1	100	57.968	Callithrix_jacchus
ENSGAFG00000018063	GFI1	100	60.233	ENSCAFG00000020155	GFI1	100	58.430	Canis_familiaris
ENSGAFG00000018063	GFI1	100	59.080	ENSCAFG00020013371	GFI1	88	58.430	Canis_lupus_dingo
ENSGAFG00000018063	GFI1	100	56.570	ENSCHIG00000016135	GFI1	100	58.661	Capra_hircus
ENSGAFG00000018063	GFI1	100	60.563	ENSCPOG00000011727	GFI1	100	57.569	Cavia_porcellus
ENSGAFG00000018063	GFI1	100	59.954	ENSCCAG00000036072	GFI1	100	57.275	Cebus_capucinus
ENSGAFG00000018063	GFI1	100	60.557	ENSCATG00000037873	GFI1	100	57.737	Cercocebus_atys
ENSGAFG00000018063	GFI1	89	80.365	ENSCLAG00000005915	GFI1	100	56.858	Chinchilla_lanigera
ENSGAFG00000018063	GFI1	99	54.692	ENSCSAG00000001469	GFI1	100	51.467	Chlorocebus_sabaeus
ENSGAFG00000018063	GFI1	100	60.557	ENSCANG00000034077	GFI1	100	57.737	Colobus_angolensis_palliatus
ENSGAFG00000018063	GFI1	100	59.861	ENSCGRG00001015432	Gfi1	100	59.165	Cricetulus_griseus_chok1gshd
ENSGAFG00000018063	GFI1	100	73.284	ENSCSEG00000017729	GFI1	100	70.833	Cynoglossus_semilaevis
ENSGAFG00000018063	GFI1	100	60.197	ENSCVAG00000011828	gfi1ab	100	58.680	Cyprinodon_variegatus
ENSGAFG00000018063	GFI1	100	83.251	ENSCVAG00000004930	GFI1	100	83.005	Cyprinodon_variegatus
ENSGAFG00000018063	GFI1	100	62.408	ENSDARG00000044457	gfi1ab	100	62.408	Danio_rerio
ENSGAFG00000018063	GFI1	100	57.494	ENSDNOG00000000782	GFI1	97	59.207	Dasypus_novemcinctus
ENSGAFG00000018063	GFI1	100	61.033	ENSEASG00005015509	GFI1	86	61.021	Equus_asinus_asinus
ENSGAFG00000018063	GFI1	98	55.707	ENSECAG00000006647	GFI1	92	51.861	Equus_caballus
ENSGAFG00000018063	GFI1	100	59.813	ENSEEUG00000000198	GFI1	100	58.548	Erinaceus_europaeus
ENSGAFG00000018063	GFI1	100	63.725	ENSELUG00000003015	gfi1ab	99	63.480	Esox_lucius
ENSGAFG00000018063	GFI1	100	63.636	ENSELUG00000019033	GFI1	100	63.145	Esox_lucius
ENSGAFG00000018063	GFI1	100	60.321	ENSFCAG00000005914	GFI1	100	59.070	Felis_catus
ENSGAFG00000018063	GFI1	100	85.112	ENSFHEG00000000341	GFI1	100	88.586	Fundulus_heteroclitus
ENSGAFG00000018063	GFI1	100	60.922	ENSFHEG00000010997	gfi1ab	100	58.722	Fundulus_heteroclitus
ENSGAFG00000018063	GFI1	100	60.976	ENSGMOG00000007737	gfi1ab	100	60.396	Gadus_morhua
ENSGAFG00000018063	GFI1	100	59.953	ENSGALG00000043650	GFI1	100	61.259	Gallus_gallus
ENSGAFG00000018063	GFI1	100	61.029	ENSGACG00000004257	gfi1ab	97	59.804	Gasterosteus_aculeatus
ENSGAFG00000018063	GFI1	100	60.789	ENSGGOG00000005320	GFI1	100	60.373	Gorilla_gorilla
ENSGAFG00000018063	GFI1	100	60.880	ENSHBUG00000011969	gfi1ab	100	59.314	Haplochromis_burtoni
ENSGAFG00000018063	GFI1	100	61.201	ENSHGLG00000008020	GFI1	100	58.933	Heterocephalus_glaber_female
ENSGAFG00000018063	GFI1	100	61.201	ENSHGLG00100000610	GFI1	100	58.933	Heterocephalus_glaber_male
ENSGAFG00000018063	GFI1	100	65.693	ENSHCOG00000019555	GFI1	100	67.857	Hippocampus_comes
ENSGAFG00000018063	GFI1	100	53.521	ENSHCOG00000008590	gfi1ab	72	60.870	Hippocampus_comes
ENSGAFG00000018063	GFI1	51	53.023	ENSIPUG00000021407	-	66	53.810	Ictalurus_punctatus
ENSGAFG00000018063	GFI1	100	59.169	ENSIPUG00000013414	GFI1	100	57.143	Ictalurus_punctatus
ENSGAFG00000018063	GFI1	100	60.341	ENSIPUG00000010071	gfi1ab	87	59.806	Ictalurus_punctatus
ENSGAFG00000018063	GFI1	100	56.818	ENSSTOG00000014583	GFI1	100	58.065	Ictidomys_tridecemlineatus
ENSGAFG00000018063	GFI1	100	59.951	ENSKMAG00000003810	gfi1ab	100	56.863	Kryptolebias_marmoratus
ENSGAFG00000018063	GFI1	100	60.688	ENSLBEG00000027776	gfi1ab	100	59.367	Labrus_bergylta
ENSGAFG00000018063	GFI1	100	60.333	ENSLACG00000013362	GFI1	98	59.005	Latimeria_chalumnae
ENSGAFG00000018063	GFI1	100	72.251	ENSLACG00000017590	-	58	73.016	Latimeria_chalumnae
ENSGAFG00000018063	GFI1	100	62.745	ENSLOCG00000004711	gfi1ab	100	60.192	Lepisosteus_oculatus
ENSGAFG00000018063	GFI1	100	60.520	ENSLAFG00000018346	GFI1	100	57.339	Loxodonta_africana
ENSGAFG00000018063	GFI1	100	60.557	ENSMFAG00000045801	GFI1	100	57.737	Macaca_fascicularis
ENSGAFG00000018063	GFI1	100	60.557	ENSMNEG00000036338	GFI1	100	57.737	Macaca_nemestrina
ENSGAFG00000018063	GFI1	100	60.557	ENSMLEG00000036181	GFI1	100	57.737	Mandrillus_leucophaeus
ENSGAFG00000018063	GFI1	100	61.800	ENSMAMG00000008125	gfi1ab	100	60.870	Mastacembelus_armatus
ENSGAFG00000018063	GFI1	100	61.800	ENSMZEG00005009895	gfi1ab	100	60.488	Maylandia_zebra
ENSGAFG00000018063	GFI1	82	63.689	ENSMGAG00000008187	GFI1	90	66.562	Meleagris_gallopavo
ENSGAFG00000018063	GFI1	100	59.217	ENSMICG00000047208	GFI1	100	57.631	Microcebus_murinus
ENSGAFG00000018063	GFI1	100	59.069	ENSMMOG00000005556	gfi1ab	100	57.921	Mola_mola
ENSGAFG00000018063	GFI1	100	61.176	ENSMODG00000011802	GFI1	100	57.541	Monodelphis_domestica
ENSGAFG00000018063	GFI1	100	60.488	ENSMALG00000014672	gfi1ab	100	59.169	Monopterus_albus
ENSGAFG00000018063	GFI1	100	60.000	MGP_CAROLIEiJ_G0027508	Gfi1	100	96.296	Mus_caroli
ENSGAFG00000018063	GFI1	100	59.954	ENSMUSG00000029275	Gfi1	100	60.325	Mus_musculus
ENSGAFG00000018063	GFI1	100	60.325	MGP_PahariEiJ_G0017280	Gfi1	100	96.296	Mus_pahari
ENSGAFG00000018063	GFI1	100	60.557	MGP_SPRETEiJ_G0028507	Gfi1	100	60.325	Mus_spretus
ENSGAFG00000018063	GFI1	100	62.716	ENSMPUG00000004178	GFI1	97	60.437	Mustela_putorius_furo
ENSGAFG00000018063	GFI1	100	56.208	ENSMLUG00000015191	GFI1	97	57.275	Myotis_lucifugus
ENSGAFG00000018063	GFI1	100	61.071	ENSNBRG00000015774	gfi1ab	100	59.466	Neolamprologus_brichardi
ENSGAFG00000018063	GFI1	89	60.677	ENSNLEG00000010470	GFI1	83	65.476	Nomascus_leucogenys
ENSGAFG00000018063	GFI1	100	60.092	ENSOPRG00000001473	GFI1	100	57.373	Ochotona_princeps
ENSGAFG00000018063	GFI1	100	61.557	ENSONIG00000019246	gfi1ab	100	60.000	Oreochromis_niloticus
ENSGAFG00000018063	GFI1	98	53.158	ENSOCUG00000023553	GFI1	93	51.562	Oryctolagus_cuniculus
ENSGAFG00000018063	GFI1	100	71.675	ENSORLG00000005060	GFI1	100	69.727	Oryzias_latipes
ENSGAFG00000018063	GFI1	100	61.179	ENSORLG00000013806	gfi1ab	100	59.559	Oryzias_latipes
ENSGAFG00000018063	GFI1	91	75.920	ENSORLG00020002817	GFI1	100	82.051	Oryzias_latipes_hni
ENSGAFG00000018063	GFI1	100	60.934	ENSORLG00020001602	gfi1ab	100	59.314	Oryzias_latipes_hni
ENSGAFG00000018063	GFI1	100	72.304	ENSORLG00015006070	GFI1	100	69.363	Oryzias_latipes_hsok
ENSGAFG00000018063	GFI1	100	73.697	ENSOMEG00000016722	GFI1	100	73.697	Oryzias_melastigma
ENSGAFG00000018063	GFI1	100	60.591	ENSOGAG00000027913	GFI1	100	59.305	Otolemur_garnettii
ENSGAFG00000018063	GFI1	100	61.386	ENSPPAG00000042186	GFI1	100	60.591	Pan_paniscus
ENSGAFG00000018063	GFI1	100	60.321	ENSPPRG00000007521	GFI1	100	59.070	Panthera_pardus
ENSGAFG00000018063	GFI1	100	60.557	ENSPTRG00000043053	GFI1	100	60.140	Pan_troglodytes
ENSGAFG00000018063	GFI1	100	60.557	ENSPANG00000016433	GFI1	100	57.737	Papio_anubis
ENSGAFG00000018063	GFI1	100	63.070	ENSPKIG00000004263	GFI1	100	59.242	Paramormyrops_kingsleyae
ENSGAFG00000018063	GFI1	82	63.798	ENSPSIG00000008734	GFI1	87	65.300	Pelodiscus_sinensis
ENSGAFG00000018063	GFI1	100	61.042	ENSPMGG00000012546	gfi1ab	100	60.199	Periophthalmus_magnuspinnatus
ENSGAFG00000018063	GFI1	99	56.533	ENSPMGG00000011041	GFI1	99	55.639	Periophthalmus_magnuspinnatus
ENSGAFG00000018063	GFI1	100	62.291	ENSPCIG00000013728	GFI1	100	59.155	Phascolarctos_cinereus
ENSGAFG00000018063	GFI1	100	61.743	ENSPFOG00000023214	gfi1ab	100	59.559	Poecilia_formosa
ENSGAFG00000018063	GFI1	100	96.269	ENSPLAG00000005376	GFI1	91	96.269	Poecilia_latipinna
ENSGAFG00000018063	GFI1	100	61.743	ENSPLAG00000010879	gfi1ab	100	73.684	Poecilia_latipinna
ENSGAFG00000018063	GFI1	100	61.743	ENSPMEG00000013694	gfi1ab	100	59.559	Poecilia_mexicana
ENSGAFG00000018063	GFI1	100	95.761	ENSPMEG00000019299	GFI1	100	95.761	Poecilia_mexicana
ENSGAFG00000018063	GFI1	100	61.165	ENSPREG00000014097	gfi1ab	100	59.314	Poecilia_reticulata
ENSGAFG00000018063	GFI1	100	84.375	ENSPREG00000007997	GFI1	100	84.375	Poecilia_reticulata
ENSGAFG00000018063	GFI1	100	49.321	ENSPCAG00000011020	GFI1	100	49.321	Procavia_capensis
ENSGAFG00000018063	GFI1	100	58.636	ENSPCOG00000020540	GFI1	100	57.859	Propithecus_coquereli
ENSGAFG00000018063	GFI1	100	62.500	ENSPVAG00000006928	GFI1	100	57.432	Pteropus_vampyrus
ENSGAFG00000018063	GFI1	100	61.800	ENSPNYG00000021183	gfi1ab	100	60.671	Pundamilia_nyererei
ENSGAFG00000018063	GFI1	100	59.902	ENSPNAG00000027258	gfi1ab	100	57.248	Pygocentrus_nattereri
ENSGAFG00000018063	GFI1	100	56.659	ENSPNAG00000028014	GFI1	100	55.529	Pygocentrus_nattereri
ENSGAFG00000018063	GFI1	100	59.954	ENSRNOG00000002042	Gfi1	100	60.000	Rattus_norvegicus
ENSGAFG00000018063	GFI1	100	60.557	ENSRBIG00000036467	GFI1	100	57.506	Rhinopithecus_bieti
ENSGAFG00000018063	GFI1	100	60.557	ENSRROG00000031687	GFI1	100	57.506	Rhinopithecus_roxellana
ENSGAFG00000018063	GFI1	100	60.417	ENSSBOG00000031300	GFI1	100	60.373	Saimiri_boliviensis_boliviensis
ENSGAFG00000018063	GFI1	100	63.990	ENSSFOG00015020295	gfi1	100	61.071	Scleropages_formosus
ENSGAFG00000018063	GFI1	100	61.858	ENSSMAG00000002782	gfi1ab	100	59.406	Scophthalmus_maximus
ENSGAFG00000018063	GFI1	100	59.658	ENSSDUG00000022410	gfi1ab	100	58.578	Seriola_dumerili
ENSGAFG00000018063	GFI1	100	59.902	ENSSLDG00000020163	gfi1ab	100	58.824	Seriola_lalandi_dorsalis
ENSGAFG00000018063	GFI1	71	68.421	ENSSPAG00000009140	gfi1ab	99	78.125	Stegastes_partitus
ENSGAFG00000018063	GFI1	100	58.864	ENSSSCG00000006902	GFI1	100	59.953	Sus_scrofa
ENSGAFG00000018063	GFI1	82	63.689	ENSTGUG00000006060	GFI1	90	66.877	Taeniopygia_guttata
ENSGAFG00000018063	GFI1	100	60.891	ENSTRUG00000000415	gfi1ab	100	60.644	Takifugu_rubripes
ENSGAFG00000018063	GFI1	100	57.452	ENSTNIG00000000651	gfi1ab	97	57.284	Tetraodon_nigroviridis
ENSGAFG00000018063	GFI1	100	61.124	ENSTTRG00000000082	GFI1	100	58.810	Tursiops_truncatus
ENSGAFG00000018063	GFI1	100	59.302	ENSUAMG00000021124	GFI1	91	58.571	Ursus_americanus
ENSGAFG00000018063	GFI1	100	59.420	ENSXETG00000023006	gfi1	98	58.824	Xenopus_tropicalis
ENSGAFG00000018063	GFI1	100	96.522	ENSXMAG00000009274	GFI1	70	96.522	Xiphophorus_maculatus
ENSGAFG00000018063	GFI1	100	60.922	ENSXMAG00000010523	gfi1ab	100	58.824	Xiphophorus_maculatus