EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000018138 (Gene tree)
Gene ID: -
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G patch domain containing 8
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 25864 bases
Position: chrNHOQ01002357.1:3659331-3685194
Accession: ZDB-GENE-030131-6966
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000026844	zf-C2H2_jaz	PF12171.8	5.3e-06	1	1
ENSGAFP00000026844	G-patch	PF01585.23	9.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000027121	-	7824	-	ENSGAFP00000026844	1486 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000018138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000018138's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000018138	gpatch8	100	83.936	ENSAPOG00000023938	gpatch8	100	84.404	Acanthochromis_polyacanthus
ENSGAFG00000018138	gpatch8	100	82.109	ENSACIG00000012241	gpatch8	100	82.377	Amphilophus_citrinellus
ENSGAFG00000018138	gpatch8	100	83.601	ENSAOCG00000018102	gpatch8	100	84.070	Amphiprion_ocellaris
ENSGAFG00000018138	gpatch8	100	83.534	ENSAPEG00000016776	gpatch8	100	84.003	Amphiprion_percula
ENSGAFG00000018138	gpatch8	100	82.019	ENSACLG00000004165	gpatch8	100	82.219	Astatotilapia_calliptera
ENSGAFG00000018138	gpatch8	76	59.398	ENSAMXG00000041683	gpatch8	56	59.513	Astyanax_mexicanus
ENSGAFG00000018138	gpatch8	100	77.985	ENSCSEG00000021277	gpatch8	100	78.319	Cynoglossus_semilaevis
ENSGAFG00000018138	gpatch8	100	88.889	ENSCVAG00000013477	gpatch8	100	88.822	Cyprinodon_variegatus
ENSGAFG00000018138	gpatch8	100	63.761	ENSDARG00000059768	gpatch8	55	60.397	Danio_rerio
ENSGAFG00000018138	gpatch8	59	47.872	ENSEBUG00000005749	gpatch8	54	49.331	Eptatretus_burgeri
ENSGAFG00000018138	gpatch8	61	63.351	ENSELUG00000019920	gpatch8	56	62.903	Esox_lucius
ENSGAFG00000018138	gpatch8	100	81.855	ENSHBUG00000002669	gpatch8	100	82.255	Haplochromis_burtoni
ENSGAFG00000018138	gpatch8	74	56.478	ENSHGLG00100010738	GPATCH8	64	62.810	Heterocephalus_glaber_male
ENSGAFG00000018138	gpatch8	100	72.515	ENSHCOG00000017518	gpatch8	56	68.561	Hippocampus_comes
ENSGAFG00000018138	gpatch8	59	58.689	ENSIPUG00000015431	gpatch8	55	60.727	Ictalurus_punctatus
ENSGAFG00000018138	gpatch8	100	83.925	ENSKMAG00000018364	gpatch8	55	81.378	Kryptolebias_marmoratus
ENSGAFG00000018138	gpatch8	100	79.640	ENSLBEG00000023352	gpatch8	100	79.640	Labrus_bergylta
ENSGAFG00000018138	gpatch8	61	81.034	ENSLOCG00000012265	gpatch8	72	75.887	Lepisosteus_oculatus
ENSGAFG00000018138	gpatch8	100	80.872	ENSMAMG00000001618	gpatch8	100	81.568	Mastacembelus_armatus
ENSGAFG00000018138	gpatch8	100	81.952	ENSMZEG00005022584	gpatch8	100	82.152	Maylandia_zebra
ENSGAFG00000018138	gpatch8	61	76.471	ENSMMOG00000020472	gpatch8	55	75.240	Mola_mola
ENSGAFG00000018138	gpatch8	100	79.064	ENSMALG00000004204	gpatch8	55	75.453	Monopterus_albus
ENSGAFG00000018138	gpatch8	50	61.850	ENSMLUG00000013840	GPATCH8	52	63.314	Myotis_lucifugus
ENSGAFG00000018138	gpatch8	100	81.988	ENSNBRG00000016402	gpatch8	100	82.388	Neolamprologus_brichardi
ENSGAFG00000018138	gpatch8	100	79.437	ENSONIG00000001292	gpatch8	100	81.132	Oreochromis_niloticus
ENSGAFG00000018138	gpatch8	61	76.471	ENSORLG00000028497	gpatch8	56	74.880	Oryzias_latipes
ENSGAFG00000018138	gpatch8	61	75.599	ENSORLG00020006656	gpatch8	56	74.038	Oryzias_latipes_hni
ENSGAFG00000018138	gpatch8	61	76.253	ENSORLG00015019797	gpatch8	56	74.639	Oryzias_latipes_hsok
ENSGAFG00000018138	gpatch8	56	54.923	ENSPKIG00000004860	GPATCH8	52	56.790	Paramormyrops_kingsleyae
ENSGAFG00000018138	gpatch8	61	53.788	ENSPKIG00000018753	gpatch8	56	55.372	Paramormyrops_kingsleyae
ENSGAFG00000018138	gpatch8	100	96.035	ENSPFOG00000014833	gpatch8	100	96.573	Poecilia_formosa
ENSGAFG00000018138	gpatch8	100	96.102	ENSPLAG00000001035	gpatch8	100	96.640	Poecilia_latipinna
ENSGAFG00000018138	gpatch8	100	96.371	ENSPMEG00000024032	gpatch8	100	96.371	Poecilia_mexicana
ENSGAFG00000018138	gpatch8	100	95.833	ENSPREG00000008911	gpatch8	100	95.968	Poecilia_reticulata
ENSGAFG00000018138	gpatch8	100	82.152	ENSPNYG00000009426	gpatch8	100	82.353	Pundamilia_nyererei
ENSGAFG00000018138	gpatch8	59	61.530	ENSPNAG00000016200	gpatch8	58	61.899	Pygocentrus_nattereri
ENSGAFG00000018138	gpatch8	55	56.228	ENSSFOG00015021377	-	55	56.821	Scleropages_formosus
ENSGAFG00000018138	gpatch8	56	57.882	ENSSFOG00015004299	GPATCH8	55	57.633	Scleropages_formosus
ENSGAFG00000018138	gpatch8	96	82.113	ENSSDUG00000018065	gpatch8	100	82.182	Seriola_dumerili
ENSGAFG00000018138	gpatch8	100	83.422	ENSSLDG00000009225	gpatch8	100	83.622	Seriola_lalandi_dorsalis
ENSGAFG00000018138	gpatch8	100	83.534	ENSSPAG00000011368	gpatch8	100	83.735	Stegastes_partitus
ENSGAFG00000018138	gpatch8	100	75.733	ENSTRUG00000020474	gpatch8	100	75.284	Takifugu_rubripes
ENSGAFG00000018138	gpatch8	58	61.232	ENSTBEG00000009486	GPATCH8	56	61.232	Tupaia_belangeri
ENSGAFG00000018138	gpatch8	100	96.450	ENSXCOG00000016680	gpatch8	100	96.450	Xiphophorus_couchianus
ENSGAFG00000018138	gpatch8	100	96.512	ENSXMAG00000009217	gpatch8	100	96.512	Xiphophorus_maculatus