EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000018151 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 6512 bases
Position: chrNHOQ01002357.1:3706906-3713417
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000026866	MMR_HSR1	PF01926.23	3.9e-05	1	1
ENSGAFP00000026867	MMR_HSR1	PF01926.23	4.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000027144	-	552	-	ENSGAFP00000026867	183 (aa)	-	-
ENSGAFT00000027143	-	2823	-	ENSGAFP00000026866	180 (aa)	-	UPI000293BBB7

Gene Model

Click here to download ENSGAFG00000018151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000018151's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000018151	-	100	92.818	ENSGAFG00000010799	arf2b	100	92.818
ENSGAFG00000018151	-	97	30.526	ENSGAFG00000009702	sar1ab	96	30.052
ENSGAFG00000018151	-	100	92.265	ENSGAFG00000009954	-	81	91.803
ENSGAFG00000018151	-	98	49.432	ENSGAFG00000002547	arl5c	98	49.432
ENSGAFG00000018151	-	92	33.133	ENSGAFG00000008497	arl8bb	89	33.133
ENSGAFG00000018151	-	92	46.386	ENSGAFG00000005872	arl3	93	46.386
ENSGAFG00000018151	-	90	33.918	ENSGAFG00000000025	arl13b	64	33.918
ENSGAFG00000018151	-	97	83.908	ENSGAFG00000018703	arf5	97	83.908
ENSGAFG00000018151	-	62	30.328	ENSGAFG00000005388	si:dkey-16l2.16	56	30.328
ENSGAFG00000018151	-	84	46.711	ENSGAFG00000008601	arl3l2	71	46.711
ENSGAFG00000018151	-	62	71.053	ENSGAFG00000002801	-	99	71.053
ENSGAFG00000018151	-	100	92.265	ENSGAFG00000021727	arf3b	100	92.265
ENSGAFG00000018151	-	82	45.946	ENSGAFG00000000058	arl11	93	45.946
ENSGAFG00000018151	-	88	47.561	ENSGAFG00000014283	arl4aa	82	47.561
ENSGAFG00000018151	-	87	44.444	ENSGAFG00000012473	arl4d	81	44.444
ENSGAFG00000018151	-	94	30.939	ENSGAFG00000004846	-	91	30.939
ENSGAFG00000018151	-	68	37.097	ENSGAFG00000017776	arl8a	72	37.097
ENSGAFG00000018151	-	92	60.000	ENSGAFG00000006973	arl1	99	60.000
ENSGAFG00000018151	-	96	47.191	ENSGAFG00000020556	arl4cb	91	47.191
ENSGAFG00000018151	-	97	81.609	ENSGAFG00000005163	-	97	81.609
ENSGAFG00000018151	-	99	91.061	ENSGAFG00000021449	-	99	91.061
ENSGAFG00000018151	-	88	33.333	ENSGAFG00000010938	arl8ba	87	33.333
ENSGAFG00000018151	-	96	47.093	ENSGAFG00000015025	arl2	93	47.093
ENSGAFG00000018151	-	86	41.558	ENSGAFG00000010573	-	81	42.484
ENSGAFG00000018151	-	92	48.521	ENSGAFG00000012819	-	86	48.521
ENSGAFG00000018151	-	86	36.111	ENSGAFG00000011077	-	99	36.111
ENSGAFG00000018151	-	99	49.724	ENSGAFG00000003465	arl5a	81	49.724
ENSGAFG00000018151	-	94	34.615	ENSGAFG00000006962	arfrp1	89	34.615
ENSGAFG00000018151	-	100	42.391	ENSGAFG00000012355	ARL6	99	42.391

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000018151	-	100	96.111	ENSACIG00000012192	-	100	96.111	Amphilophus_citrinellus
ENSGAFG00000018151	-	84	98.013	ENSAOCG00000001275	-	88	98.013	Amphiprion_ocellaris
ENSGAFG00000018151	-	100	97.778	ENSAPEG00000016909	-	100	97.778	Amphiprion_percula
ENSGAFG00000018151	-	100	98.333	ENSATEG00000003174	-	100	98.333	Anabas_testudineus
ENSGAFG00000018151	-	100	96.111	ENSACLG00000004123	-	100	96.111	Astatotilapia_calliptera
ENSGAFG00000018151	-	100	92.818	ENSAMXG00000019845	arf1	100	92.818	Astyanax_mexicanus
ENSGAFG00000018151	-	100	100.000	ENSCVAG00000013374	-	100	100.000	Cyprinodon_variegatus
ENSGAFG00000018151	-	100	92.818	ENSDARG00000009484	arf1	100	92.818	Danio_rerio
ENSGAFG00000018151	-	100	93.370	ENSELUG00000022533	arf1	79	93.370	Esox_lucius
ENSGAFG00000018151	-	100	99.444	ENSFHEG00000005859	-	100	99.444	Fundulus_heteroclitus
ENSGAFG00000018151	-	96	88.439	ENSGMOG00000000429	arf1	95	88.439	Gadus_morhua
ENSGAFG00000018151	-	100	86.667	ENSGACG00000014195	-	97	86.667	Gasterosteus_aculeatus
ENSGAFG00000018151	-	100	96.111	ENSHBUG00000002636	-	100	96.111	Haplochromis_burtoni
ENSGAFG00000018151	-	100	92.265	ENSIPUG00000006311	arf1	100	92.265	Ictalurus_punctatus
ENSGAFG00000018151	-	100	95.000	ENSKMAG00000018315	-	100	95.000	Kryptolebias_marmoratus
ENSGAFG00000018151	-	99	88.764	ENSLBEG00000023263	-	100	87.432	Labrus_bergylta
ENSGAFG00000018151	-	99	89.385	ENSLBEG00000001998	arf1	99	89.385	Labrus_bergylta
ENSGAFG00000018151	-	100	98.333	ENSMAMG00000001553	-	100	98.333	Mastacembelus_armatus
ENSGAFG00000018151	-	100	96.111	ENSMZEG00005022594	-	100	96.111	Maylandia_zebra
ENSGAFG00000018151	-	100	97.778	ENSMALG00000004269	-	100	97.778	Monopterus_albus
ENSGAFG00000018151	-	100	96.111	ENSNBRG00000016455	-	100	96.111	Neolamprologus_brichardi
ENSGAFG00000018151	-	100	96.111	ENSONIG00000001286	-	100	96.111	Oreochromis_niloticus
ENSGAFG00000018151	-	100	97.222	ENSORLG00000023270	-	100	97.222	Oryzias_latipes
ENSGAFG00000018151	-	100	96.667	ENSORLG00020006712	-	100	96.667	Oryzias_latipes_hni
ENSGAFG00000018151	-	100	97.222	ENSORLG00015019836	-	100	97.222	Oryzias_latipes_hsok
ENSGAFG00000018151	-	100	97.222	ENSOMEG00000023784	-	100	97.222	Oryzias_melastigma
ENSGAFG00000018151	-	100	88.950	ENSPMGG00000014174	arf1	98	91.176	Periophthalmus_magnuspinnatus
ENSGAFG00000018151	-	100	92.778	ENSPMAG00000002035	arf1	100	92.778	Petromyzon_marinus
ENSGAFG00000018151	-	100	100.000	ENSPFOG00000014787	-	100	100.000	Poecilia_formosa
ENSGAFG00000018151	-	100	100.000	ENSPLAG00000001041	-	100	100.000	Poecilia_latipinna
ENSGAFG00000018151	-	100	100.000	ENSPMEG00000024077	-	100	100.000	Poecilia_mexicana
ENSGAFG00000018151	-	100	100.000	ENSPREG00000009009	-	100	100.000	Poecilia_reticulata
ENSGAFG00000018151	-	100	96.111	ENSPNYG00000009472	-	100	96.111	Pundamilia_nyererei
ENSGAFG00000018151	-	94	95.266	ENSPNAG00000000098	arf1	93	95.266	Pygocentrus_nattereri
ENSGAFG00000018151	-	99	76.667	YDL192W	-	99	76.667	Saccharomyces_cerevisiae
ENSGAFG00000018151	-	99	75.978	YDL137W	-	99	75.978	Saccharomyces_cerevisiae
ENSGAFG00000018151	-	100	91.111	ENSSMAG00000006125	-	100	91.111	Scophthalmus_maximus
ENSGAFG00000018151	-	100	97.222	ENSSDUG00000017356	-	100	97.222	Seriola_dumerili
ENSGAFG00000018151	-	100	97.222	ENSSLDG00000008504	-	100	97.222	Seriola_lalandi_dorsalis
ENSGAFG00000018151	-	100	98.333	ENSSPAG00000011431	-	100	98.333	Stegastes_partitus
ENSGAFG00000018151	-	100	95.000	ENSTRUG00000019870	-	100	95.000	Takifugu_rubripes
ENSGAFG00000018151	-	100	93.333	ENSTNIG00000011685	-	100	93.333	Tetraodon_nigroviridis
ENSGAFG00000018151	-	100	100.000	ENSXCOG00000016687	-	100	99.454	Xiphophorus_couchianus
ENSGAFG00000018151	-	100	100.000	ENSXMAG00000009193	-	100	100.000	Xiphophorus_maculatus