EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000018198 (Gene tree)
Gene ID: -
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1-like
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 15629 bases
Position: chrNHOQ01002838.1:3030009-3045637
Accession: ZDB-GENE-040426-892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000026950	ResIII	PF04851.15	8e-11	1	1
ENSGAFP00000026946	ResIII	PF04851.15	9.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000027228	-	2541	-	ENSGAFP00000026950	846 (aa)	-	-
ENSGAFT00000027224	-	3562	-	ENSGAFP00000026946	1019 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000018198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000018198's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000018198	chd1l	61	40.037	ENSGAFG00000017731	smarca5	52	41.166
ENSGAFG00000018198	chd1l	56	40.307	ENSGAFG00000014337	-	88	45.822
ENSGAFG00000018198	chd1l	52	30.237	ENSGAFG00000007901	rad54b	59	32.411
ENSGAFG00000018198	chd1l	54	38.636	ENSGAFG00000001204	hells	56	45.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000018198	chd1l	97	62.485	ENSG00000131778	CHD1L	98	65.422	Homo_sapiens
ENSGAFG00000018198	chd1l	97	82.139	ENSAPOG00000001539	chd1l	99	84.271	Acanthochromis_polyacanthus
ENSGAFG00000018198	chd1l	97	62.750	ENSAMEG00000017063	CHD1L	96	64.490	Ailuropoda_melanoleuca
ENSGAFG00000018198	chd1l	97	78.496	ENSACIG00000001164	chd1l	99	81.705	Amphilophus_citrinellus
ENSGAFG00000018198	chd1l	100	81.569	ENSAOCG00000014510	chd1l	99	81.471	Amphiprion_ocellaris
ENSGAFG00000018198	chd1l	99	76.932	ENSAPEG00000017573	chd1l	95	81.630	Amphiprion_percula
ENSGAFG00000018198	chd1l	99	76.790	ENSAPEG00000017450	chd1l	95	81.724	Amphiprion_percula
ENSGAFG00000018198	chd1l	100	79.668	ENSATEG00000013058	chd1l	99	79.668	Anabas_testudineus
ENSGAFG00000018198	chd1l	96	60.926	ENSAPLG00000009976	CHD1L	94	63.455	Anas_platyrhynchos
ENSGAFG00000018198	chd1l	97	59.516	ENSACAG00000017686	CHD1L	96	61.591	Anolis_carolinensis
ENSGAFG00000018198	chd1l	97	61.782	ENSANAG00000024347	CHD1L	96	64.713	Aotus_nancymaae
ENSGAFG00000018198	chd1l	99	78.555	ENSACLG00000019304	chd1l	96	81.435	Astatotilapia_calliptera
ENSGAFG00000018198	chd1l	99	62.761	ENSAMXG00000012367	chd1l	99	60.390	Astyanax_mexicanus
ENSGAFG00000018198	chd1l	97	62.324	ENSBTAG00000020831	CHD1L	96	64.294	Bos_taurus
ENSGAFG00000018198	chd1l	98	61.395	ENSCJAG00000002406	CHD1L	96	64.343	Callithrix_jacchus
ENSGAFG00000018198	chd1l	97	59.577	ENSCAFG00000010944	CHD1L	95	61.877	Canis_familiaris
ENSGAFG00000018198	chd1l	99	60.529	ENSCAFG00020020121	CHD1L	96	64.311	Canis_lupus_dingo
ENSGAFG00000018198	chd1l	97	61.737	ENSCHIG00000013871	CHD1L	96	64.064	Capra_hircus
ENSGAFG00000018198	chd1l	95	62.321	ENSTSYG00000003005	CHD1L	99	64.277	Carlito_syrichta
ENSGAFG00000018198	chd1l	97	59.627	ENSCPOG00000009000	CHD1L	97	62.357	Cavia_porcellus
ENSGAFG00000018198	chd1l	98	59.419	ENSCCAG00000036079	CHD1L	96	61.670	Cebus_capucinus
ENSGAFG00000018198	chd1l	97	61.854	ENSCATG00000031044	CHD1L	96	64.794	Cercocebus_atys
ENSGAFG00000018198	chd1l	97	61.972	ENSCLAG00000000880	CHD1L	96	65.197	Chinchilla_lanigera
ENSGAFG00000018198	chd1l	97	62.089	ENSCSAG00000018386	CHD1L	96	64.645	Chlorocebus_sabaeus
ENSGAFG00000018198	chd1l	97	62.932	ENSCPBG00000002600	CHD1L	97	65.052	Chrysemys_picta_bellii
ENSGAFG00000018198	chd1l	97	61.502	ENSCANG00000020239	CHD1L	96	63.616	Colobus_angolensis_palliatus
ENSGAFG00000018198	chd1l	98	61.977	ENSCGRG00001021624	Chd1l	97	64.483	Cricetulus_griseus_chok1gshd
ENSGAFG00000018198	chd1l	95	62.440	ENSCGRG00000007554	Chd1l	99	65.012	Cricetulus_griseus_crigri
ENSGAFG00000018198	chd1l	99	81.171	ENSCVAG00000002595	chd1l	97	85.371	Cyprinodon_variegatus
ENSGAFG00000018198	chd1l	99	68.858	ENSDARG00000015471	chd1l	99	68.324	Danio_rerio
ENSGAFG00000018198	chd1l	97	62.089	ENSDNOG00000019504	CHD1L	96	64.409	Dasypus_novemcinctus
ENSGAFG00000018198	chd1l	97	59.907	ENSDORG00000013555	Chd1l	96	62.761	Dipodomys_ordii
ENSGAFG00000018198	chd1l	88	59.049	ENSETEG00000008445	CHD1L	87	63.196	Echinops_telfairi
ENSGAFG00000018198	chd1l	65	76.087	ENSEBUG00000005791	chd1l	74	76.087	Eptatretus_burgeri
ENSGAFG00000018198	chd1l	99	60.945	ENSEASG00005007364	CHD1L	98	66.054	Equus_asinus_asinus
ENSGAFG00000018198	chd1l	99	60.945	ENSECAG00000008915	CHD1L	98	66.054	Equus_caballus
ENSGAFG00000018198	chd1l	100	59.423	ENSELUG00000016844	chd1l	99	59.519	Esox_lucius
ENSGAFG00000018198	chd1l	97	62.175	ENSFCAG00000007777	CHD1L	96	63.876	Felis_catus
ENSGAFG00000018198	chd1l	97	60.731	ENSFALG00000006087	CHD1L	94	63.636	Ficedula_albicollis
ENSGAFG00000018198	chd1l	95	62.560	ENSFDAG00000012431	CHD1L	99	65.029	Fukomys_damarensis
ENSGAFG00000018198	chd1l	99	86.832	ENSFHEG00000012420	chd1l	100	86.436	Fundulus_heteroclitus
ENSGAFG00000018198	chd1l	97	60.613	ENSGALG00000015038	CHD1L	95	63.256	Gallus_gallus
ENSGAFG00000018198	chd1l	58	78.740	ENSGACG00000014042	chd1l	97	85.010	Gasterosteus_aculeatus
ENSGAFG00000018198	chd1l	97	62.911	ENSGAGG00000014432	CHD1L	96	65.421	Gopherus_agassizii
ENSGAFG00000018198	chd1l	97	61.893	ENSGGOG00000001067	CHD1L	95	64.740	Gorilla_gorilla
ENSGAFG00000018198	chd1l	99	78.670	ENSHBUG00000007464	chd1l	98	81.456	Haplochromis_burtoni
ENSGAFG00000018198	chd1l	97	60.702	ENSHGLG00000008933	CHD1L	97	63.761	Heterocephalus_glaber_female
ENSGAFG00000018198	chd1l	94	59.857	ENSHGLG00100007155	CHD1L	98	63.251	Heterocephalus_glaber_male
ENSGAFG00000018198	chd1l	97	71.647	ENSHCOG00000012787	chd1l	94	73.739	Hippocampus_comes
ENSGAFG00000018198	chd1l	99	66.474	ENSIPUG00000022617	chd1l	99	64.500	Ictalurus_punctatus
ENSGAFG00000018198	chd1l	98	56.567	ENSSTOG00000007032	CHD1L	97	58.763	Ictidomys_tridecemlineatus
ENSGAFG00000018198	chd1l	100	79.706	ENSKMAG00000014358	chd1l	99	79.765	Kryptolebias_marmoratus
ENSGAFG00000018198	chd1l	100	78.585	ENSLBEG00000023845	chd1l	99	78.502	Labrus_bergylta
ENSGAFG00000018198	chd1l	99	58.134	ENSLACG00000006262	CHD1L	99	57.473	Latimeria_chalumnae
ENSGAFG00000018198	chd1l	100	68.262	ENSLOCG00000010574	chd1l	100	67.871	Lepisosteus_oculatus
ENSGAFG00000018198	chd1l	95	61.831	ENSLAFG00000018136	CHD1L	99	64.789	Loxodonta_africana
ENSGAFG00000018198	chd1l	95	61.916	ENSMFAG00000043562	CHD1L	98	65.735	Macaca_fascicularis
ENSGAFG00000018198	chd1l	97	61.972	ENSMMUG00000009024	CHD1L	96	64.908	Macaca_mulatta
ENSGAFG00000018198	chd1l	97	61.972	ENSMNEG00000039905	CHD1L	96	64.908	Macaca_nemestrina
ENSGAFG00000018198	chd1l	97	61.972	ENSMLEG00000030900	CHD1L	96	64.908	Mandrillus_leucophaeus
ENSGAFG00000018198	chd1l	100	79.317	ENSMAMG00000012822	chd1l	99	80.253	Mastacembelus_armatus
ENSGAFG00000018198	chd1l	99	78.670	ENSMZEG00005020830	chd1l	95	81.002	Maylandia_zebra
ENSGAFG00000018198	chd1l	95	60.906	ENSMGAG00000014304	CHD1L	98	63.561	Meleagris_gallopavo
ENSGAFG00000018198	chd1l	98	61.938	ENSMICG00000002497	CHD1L	96	65.063	Microcebus_murinus
ENSGAFG00000018198	chd1l	97	61.628	ENSMOCG00000006305	Chd1l	97	64.376	Microtus_ochrogaster
ENSGAFG00000018198	chd1l	99	72.112	ENSMMOG00000005964	chd1l	91	74.600	Mola_mola
ENSGAFG00000018198	chd1l	99	60.138	ENSMODG00000018717	CHD1L	97	62.585	Monodelphis_domestica
ENSGAFG00000018198	chd1l	100	80.373	ENSMALG00000014675	chd1l	99	80.235	Monopterus_albus
ENSGAFG00000018198	chd1l	97	61.988	MGP_CAROLIEiJ_G0025401	Chd1l	98	64.229	Mus_caroli
ENSGAFG00000018198	chd1l	97	61.485	ENSMUSG00000028089	Chd1l	98	64.036	Mus_musculus
ENSGAFG00000018198	chd1l	97	62.368	MGP_PahariEiJ_G0026845	Chd1l	98	64.262	Mus_pahari
ENSGAFG00000018198	chd1l	97	61.944	MGP_SPRETEiJ_G0026347	Chd1l	98	64.189	Mus_spretus
ENSGAFG00000018198	chd1l	97	62.397	ENSMPUG00000000615	CHD1L	97	63.886	Mustela_putorius_furo
ENSGAFG00000018198	chd1l	97	60.492	ENSMLUG00000007573	CHD1L	96	62.770	Myotis_lucifugus
ENSGAFG00000018198	chd1l	95	58.781	ENSNGAG00000000908	Chd1l	97	62.061	Nannospalax_galili
ENSGAFG00000018198	chd1l	99	75.862	ENSNBRG00000006021	chd1l	95	79.295	Neolamprologus_brichardi
ENSGAFG00000018198	chd1l	97	61.150	ENSNLEG00000000179	CHD1L	95	64.228	Nomascus_leucogenys
ENSGAFG00000018198	chd1l	87	62.205	ENSOPRG00000006973	CHD1L	92	65.458	Ochotona_princeps
ENSGAFG00000018198	chd1l	97	57.760	ENSODEG00000002494	CHD1L	97	61.009	Octodon_degus
ENSGAFG00000018198	chd1l	100	80.739	ENSONIG00000003183	chd1l	99	80.156	Oreochromis_niloticus
ENSGAFG00000018198	chd1l	87	57.506	ENSOANG00000003068	CHD1L	93	61.667	Ornithorhynchus_anatinus
ENSGAFG00000018198	chd1l	97	59.080	ENSOCUG00000009336	CHD1L	96	60.787	Oryctolagus_cuniculus
ENSGAFG00000018198	chd1l	99	75.260	ENSORLG00000003673	chd1l	96	77.980	Oryzias_latipes
ENSGAFG00000018198	chd1l	99	75.346	ENSORLG00020005123	chd1l	99	79.083	Oryzias_latipes_hni
ENSGAFG00000018198	chd1l	99	75.520	ENSORLG00015001680	chd1l	98	78.966	Oryzias_latipes_hsok
ENSGAFG00000018198	chd1l	81	77.273	ENSOMEG00000006109	chd1l	96	77.273	Oryzias_melastigma
ENSGAFG00000018198	chd1l	97	61.854	ENSOGAG00000008775	CHD1L	96	64.564	Otolemur_garnettii
ENSGAFG00000018198	chd1l	99	61.156	ENSOARG00000020547	CHD1L	98	64.906	Ovis_aries
ENSGAFG00000018198	chd1l	96	61.730	ENSPPAG00000039193	CHD1L	99	65.735	Pan_paniscus
ENSGAFG00000018198	chd1l	97	62.530	ENSPPRG00000010258	CHD1L	96	63.959	Panthera_pardus
ENSGAFG00000018198	chd1l	97	62.367	ENSPTRG00000001220	CHD1L	96	64.821	Pan_troglodytes
ENSGAFG00000018198	chd1l	97	62.367	ENSPANG00000009170	CHD1L	96	64.908	Papio_anubis
ENSGAFG00000018198	chd1l	99	68.959	ENSPKIG00000022166	chd1l	99	68.959	Paramormyrops_kingsleyae
ENSGAFG00000018198	chd1l	97	63.046	ENSPSIG00000012595	CHD1L	97	63.801	Pelodiscus_sinensis
ENSGAFG00000018198	chd1l	98	60.069	ENSPEMG00000013528	Chd1l	97	63.584	Peromyscus_maniculatus_bairdii
ENSGAFG00000018198	chd1l	92	61.596	ENSPCIG00000030409	CHD1L	98	64.496	Phascolarctos_cinereus
ENSGAFG00000018198	chd1l	100	93.346	ENSPFOG00000015948	chd1l	100	93.151	Poecilia_formosa
ENSGAFG00000018198	chd1l	100	95.196	ENSPLAG00000015145	chd1l	100	95.000	Poecilia_latipinna
ENSGAFG00000018198	chd1l	94	94.549	ENSPMEG00000008720	chd1l	99	94.235	Poecilia_mexicana
ENSGAFG00000018198	chd1l	99	86.567	ENSPREG00000017885	chd1l	98	92.078	Poecilia_reticulata
ENSGAFG00000018198	chd1l	97	61.620	ENSPPYG00000000946	CHD1L	96	64.302	Pongo_abelii
ENSGAFG00000018198	chd1l	92	56.489	ENSPCAG00000005959	CHD1L	90	58.486	Procavia_capensis
ENSGAFG00000018198	chd1l	95	58.732	ENSPVAG00000006084	CHD1L	99	60.681	Pteropus_vampyrus
ENSGAFG00000018198	chd1l	99	77.943	ENSPNYG00000013001	chd1l	97	81.570	Pundamilia_nyererei
ENSGAFG00000018198	chd1l	99	69.213	ENSPNAG00000011881	chd1l	99	67.954	Pygocentrus_nattereri
ENSGAFG00000018198	chd1l	98	61.327	ENSRNOG00000017669	Chd1l	98	64.262	Rattus_norvegicus
ENSGAFG00000018198	chd1l	97	61.502	ENSRBIG00000041272	CHD1L	96	63.991	Rhinopithecus_bieti
ENSGAFG00000018198	chd1l	98	61.665	ENSRROG00000041354	CHD1L	96	64.186	Rhinopithecus_roxellana
ENSGAFG00000018198	chd1l	99	59.054	ENSSHAG00000017395	CHD1L	99	60.981	Sarcophilus_harrisii
ENSGAFG00000018198	chd1l	99	69.266	ENSSFOG00015003649	chd1l	98	71.527	Scleropages_formosus
ENSGAFG00000018198	chd1l	100	76.186	ENSSMAG00000019377	chd1l	99	75.825	Scophthalmus_maximus
ENSGAFG00000018198	chd1l	98	77.673	ENSSDUG00000019831	chd1l	95	81.434	Seriola_dumerili
ENSGAFG00000018198	chd1l	98	76.709	ENSSLDG00000012714	chd1l	95	81.733	Seriola_lalandi_dorsalis
ENSGAFG00000018198	chd1l	97	60.520	ENSSPUG00000016865	CHD1L	97	63.031	Sphenodon_punctatus
ENSGAFG00000018198	chd1l	99	79.378	ENSSPAG00000017653	chd1l	99	82.008	Stegastes_partitus
ENSGAFG00000018198	chd1l	97	60.304	ENSSSCG00000006701	CHD1L	97	62.457	Sus_scrofa
ENSGAFG00000018198	chd1l	97	61.176	ENSTGUG00000013392	-	98	64.061	Taeniopygia_guttata
ENSGAFG00000018198	chd1l	97	65.680	ENSTNIG00000004902	chd1l	99	68.611	Tetraodon_nigroviridis
ENSGAFG00000018198	chd1l	95	59.736	ENSTTRG00000011711	CHD1L	100	62.053	Tursiops_truncatus
ENSGAFG00000018198	chd1l	97	62.162	ENSUAMG00000021991	CHD1L	96	65.212	Ursus_americanus
ENSGAFG00000018198	chd1l	96	63.209	ENSUMAG00000009733	CHD1L	96	65.053	Ursus_maritimus
ENSGAFG00000018198	chd1l	97	61.692	ENSVVUG00000007316	CHD1L	91	63.847	Vulpes_vulpes
ENSGAFG00000018198	chd1l	96	92.057	ENSXCOG00000008336	chd1l	96	92.057	Xiphophorus_couchianus
ENSGAFG00000018198	chd1l	100	96.471	ENSXMAG00000015898	chd1l	100	96.275	Xiphophorus_maculatus