EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000018237 (Gene tree)
Gene ID: -
Gene Symbol: srsf5a
Alias: fb49e01|im:6906390|sfrs5|sfrs5a|wu:fb49e01|wu:fj09b12
Full Name: serine/arginine-rich splicing factor 5a
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 3677 bases
Position: chrNHOQ01000541.1:4791938-4795614
Accession: ZDB-GENE-030131-7336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000027000	RRM_1	PF00076.22	1.5e-31	1	2
ENSGAFP00000027000	RRM_1	PF00076.22	1.5e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000027278	-	876	-	ENSGAFP00000027000	291 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000018237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000018237's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000018237	srsf5a	51	39.645	ENSGAFG00000009123	srsf9	78	41.420
ENSGAFG00000018237	srsf5a	68	35.242	ENSGAFG00000012721	-	66	40.244
ENSGAFG00000018237	srsf5a	51	36.782	ENSGAFG00000000609	-	68	37.427
ENSGAFG00000018237	srsf5a	82	50.951	ENSGAFG00000018496	srsf4	64	55.618
ENSGAFG00000018237	srsf5a	55	63.830	ENSGAFG00000002865	srsf5b	61	64.674

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000018237	srsf5a	74	63.900	ENSAPOG00000017395	srsf5a	80	73.770	Acanthochromis_polyacanthus
ENSGAFG00000018237	srsf5a	93	57.534	ENSACIG00000011892	srsf5a	98	64.706	Amphilophus_citrinellus
ENSGAFG00000018237	srsf5a	74	64.167	ENSAOCG00000014967	srsf5a	82	76.132	Amphiprion_ocellaris
ENSGAFG00000018237	srsf5a	74	64.167	ENSAPEG00000009297	srsf5a	82	76.132	Amphiprion_percula
ENSGAFG00000018237	srsf5a	74	63.934	ENSATEG00000000198	srsf5a	84	73.684	Anabas_testudineus
ENSGAFG00000018237	srsf5a	54	69.663	ENSAPLG00000002469	-	70	69.663	Anas_platyrhynchos
ENSGAFG00000018237	srsf5a	54	70.787	ENSACAG00000029015	-	68	70.787	Anolis_carolinensis
ENSGAFG00000018237	srsf5a	78	61.303	ENSACLG00000027166	srsf5a	82	72.112	Astatotilapia_calliptera
ENSGAFG00000018237	srsf5a	54	73.410	ENSAMXG00000030476	srsf5a	91	69.456	Astyanax_mexicanus
ENSGAFG00000018237	srsf5a	54	71.508	ENSCPBG00000021518	-	70	71.508	Chrysemys_picta_bellii
ENSGAFG00000018237	srsf5a	55	50.254	ENSCSAVG00000011376	-	78	50.510	Ciona_savignyi
ENSGAFG00000018237	srsf5a	74	62.400	ENSCSEG00000008109	srsf5a	79	72.332	Cynoglossus_semilaevis
ENSGAFG00000018237	srsf5a	73	79.757	ENSCVAG00000016982	srsf5a	98	68.148	Cyprinodon_variegatus
ENSGAFG00000018237	srsf5a	56	71.277	ENSDARG00000029818	srsf5a	100	64.662	Danio_rerio
ENSGAFG00000018237	srsf5a	92	53.896	ENSELUG00000020439	srsf5a	62	68.394	Esox_lucius
ENSGAFG00000018237	srsf5a	60	61.261	ENSFALG00000005098	-	64	69.886	Ficedula_albicollis
ENSGAFG00000018237	srsf5a	75	79.231	ENSFHEG00000003955	srsf5a	93	78.899	Fundulus_heteroclitus
ENSGAFG00000018237	srsf5a	54	76.374	ENSGMOG00000000869	srsf5a	94	77.966	Gadus_morhua
ENSGAFG00000018237	srsf5a	60	71.204	ENSGALG00000033259	SRSF5A	63	70.286	Gallus_gallus
ENSGAFG00000018237	srsf5a	54	79.213	ENSGACG00000011761	srsf5a	70	79.213	Gasterosteus_aculeatus
ENSGAFG00000018237	srsf5a	54	71.508	ENSGAGG00000007312	-	70	71.508	Gopherus_agassizii
ENSGAFG00000018237	srsf5a	78	61.538	ENSHBUG00000014048	srsf5a	82	72.400	Haplochromis_burtoni
ENSGAFG00000018237	srsf5a	54	75.269	ENSHCOG00000017557	srsf5a	62	75.269	Hippocampus_comes
ENSGAFG00000018237	srsf5a	54	69.474	ENSIPUG00000003439	srsf5a	69	68.947	Ictalurus_punctatus
ENSGAFG00000018237	srsf5a	54	73.404	ENSKMAG00000014937	srsf5a	73	70.683	Kryptolebias_marmoratus
ENSGAFG00000018237	srsf5a	54	71.282	ENSLBEG00000017153	srsf5a	74	71.282	Labrus_bergylta
ENSGAFG00000018237	srsf5a	54	72.222	ENSLACG00000017874	-	70	72.222	Latimeria_chalumnae
ENSGAFG00000018237	srsf5a	54	70.811	ENSLOCG00000014075	srsf5a	61	70.811	Lepisosteus_oculatus
ENSGAFG00000018237	srsf5a	74	65.126	ENSMAMG00000000192	srsf5a	84	75.104	Mastacembelus_armatus
ENSGAFG00000018237	srsf5a	78	61.538	ENSMZEG00005010485	srsf5a	82	72.400	Maylandia_zebra
ENSGAFG00000018237	srsf5a	58	70.213	ENSMGAG00000011888	-	96	70.064	Meleagris_gallopavo
ENSGAFG00000018237	srsf5a	54	78.333	ENSMMOG00000009793	srsf5a	79	74.583	Mola_mola
ENSGAFG00000018237	srsf5a	74	67.111	ENSMALG00000021194	srsf5a	81	76.419	Monopterus_albus
ENSGAFG00000018237	srsf5a	78	61.776	ENSNBRG00000000771	srsf5a	82	72.691	Neolamprologus_brichardi
ENSGAFG00000018237	srsf5a	78	61.776	ENSONIG00000019583	srsf5a	82	72.691	Oreochromis_niloticus
ENSGAFG00000018237	srsf5a	73	76.596	ENSORLG00000009268	srsf5a	85	75.934	Oryzias_latipes
ENSGAFG00000018237	srsf5a	73	76.596	ENSORLG00020003281	srsf5	85	75.934	Oryzias_latipes_hni
ENSGAFG00000018237	srsf5a	73	76.596	ENSORLG00015023075	srsf5	85	75.934	Oryzias_latipes_hsok
ENSGAFG00000018237	srsf5a	54	77.778	ENSOMEG00000000628	srsf5a	85	75.000	Oryzias_melastigma
ENSGAFG00000018237	srsf5a	54	72.581	ENSPKIG00000002054	srsf5a	68	72.581	Paramormyrops_kingsleyae
ENSGAFG00000018237	srsf5a	54	71.186	ENSPSIG00000008238	-	69	71.186	Pelodiscus_sinensis
ENSGAFG00000018237	srsf5a	75	58.367	ENSPMGG00000020125	srsf5a	73	58.367	Periophthalmus_magnuspinnatus
ENSGAFG00000018237	srsf5a	94	79.355	ENSPFOG00000022993	srsf5a	93	79.677	Poecilia_formosa
ENSGAFG00000018237	srsf5a	93	79.288	ENSPLAG00000005508	srsf5a	93	79.612	Poecilia_latipinna
ENSGAFG00000018237	srsf5a	94	80.000	ENSPMEG00000016339	srsf5a	93	80.323	Poecilia_mexicana
ENSGAFG00000018237	srsf5a	94	78.135	ENSPREG00000018091	srsf5a	93	78.457	Poecilia_reticulata
ENSGAFG00000018237	srsf5a	78	61.538	ENSPNYG00000021245	srsf5a	82	72.400	Pundamilia_nyererei
ENSGAFG00000018237	srsf5a	54	71.739	ENSPNAG00000021333	srsf5a	66	71.739	Pygocentrus_nattereri
ENSGAFG00000018237	srsf5a	73	71.255	ENSSFOG00015008377	srsf5	66	73.118	Scleropages_formosus
ENSGAFG00000018237	srsf5a	73	68.504	ENSSMAG00000010899	srsf5a	93	65.398	Scophthalmus_maximus
ENSGAFG00000018237	srsf5a	74	64.854	ENSSDUG00000006103	srsf5a	82	74.793	Seriola_dumerili
ENSGAFG00000018237	srsf5a	74	65.272	ENSSLDG00000004146	srsf5a	81	75.207	Seriola_lalandi_dorsalis
ENSGAFG00000018237	srsf5a	54	68.539	ENSSPUG00000002052	-	68	67.978	Sphenodon_punctatus
ENSGAFG00000018237	srsf5a	74	64.435	ENSSPAG00000002821	srsf5a	82	74.486	Stegastes_partitus
ENSGAFG00000018237	srsf5a	74	60.643	ENSTRUG00000022908	srsf5a	83	69.841	Takifugu_rubripes
ENSGAFG00000018237	srsf5a	99	54.088	ENSXETG00000017937	srsf5a	72	67.553	Xenopus_tropicalis
ENSGAFG00000018237	srsf5a	94	69.307	ENSXCOG00000015338	srsf5a	93	80.132	Xiphophorus_couchianus
ENSGAFG00000018237	srsf5a	94	78.457	ENSXMAG00000012823	srsf5a	93	79.032	Xiphophorus_maculatus