EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000018301 (Gene tree)
Gene ID: -
Gene Symbol: pcbp4
Alias: wu:fc68f03|zgc:65870|zgc:77347
Full Name: poly(rC) binding protein 4
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 8194 bases
Position: chrNHOQ01002745.1:192109-200302
Accession: ZDB-GENE-040426-2122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000027085	KH_1	PF00013.29	1.4e-22	1	1
ENSGAFP00000027085	KH_2	PF07650.17	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000027366	-	717	-	ENSGAFP00000027085	238 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000018301's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000018301's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000018301	pcbp4	61	73.649	ENSGAFG00000017864	zgc:110045	79	73.649
ENSGAFG00000018301	pcbp4	63	72.483	ENSGAFG00000013273	PCBP2	65	72.483
ENSGAFG00000018301	pcbp4	69	68.293	ENSGAFG00000010274	-	77	68.293
ENSGAFG00000018301	pcbp4	63	71.812	ENSGAFG00000007972	pcbp2	70	68.354
ENSGAFG00000018301	pcbp4	72	40.299	ENSGAFG00000012633	hnrpkl	54	40.299
ENSGAFG00000018301	pcbp4	63	74.172	ENSGAFG00000011430	pcbp3	59	74.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000018301	pcbp4	63	77.483	ENSG00000090097	PCBP4	84	71.186	Homo_sapiens
ENSGAFG00000018301	pcbp4	74	87.429	ENSAPOG00000018462	-	75	87.429	Acanthochromis_polyacanthus
ENSGAFG00000018301	pcbp4	64	86.842	ENSAPOG00000009897	-	56	86.842	Acanthochromis_polyacanthus
ENSGAFG00000018301	pcbp4	64	96.711	ENSACIG00000015264	pcbp4	51	96.711	Amphilophus_citrinellus
ENSGAFG00000018301	pcbp4	64	88.158	ENSACIG00000020434	-	50	88.158	Amphilophus_citrinellus
ENSGAFG00000018301	pcbp4	57	96.324	ENSAOCG00000006924	-	70	96.324	Amphiprion_ocellaris
ENSGAFG00000018301	pcbp4	63	88.079	ENSAOCG00000021366	-	60	87.500	Amphiprion_ocellaris
ENSGAFG00000018301	pcbp4	64	96.711	ENSAPEG00000023157	pcbp4	70	97.080	Amphiprion_percula
ENSGAFG00000018301	pcbp4	72	78.771	ENSAPEG00000009555	-	73	78.771	Amphiprion_percula
ENSGAFG00000018301	pcbp4	63	88.079	ENSATEG00000006511	-	58	88.079	Anabas_testudineus
ENSGAFG00000018301	pcbp4	64	83.553	ENSCSEG00000021041	PCBP4	65	83.553	Cynoglossus_semilaevis
ENSGAFG00000018301	pcbp4	63	98.000	ENSCVAG00000003674	pcbp4	62	93.865	Cyprinodon_variegatus
ENSGAFG00000018301	pcbp4	64	93.421	ENSDARG00000024276	pcbp4	73	94.595	Danio_rerio
ENSGAFG00000018301	pcbp4	63	66.474	ENSETEG00000001778	PCBP4	59	66.474	Echinops_telfairi
ENSGAFG00000018301	pcbp4	63	86.755	ENSELUG00000001870	-	51	86.667	Esox_lucius
ENSGAFG00000018301	pcbp4	64	92.105	ENSELUG00000018204	pcbp4	69	92.105	Esox_lucius
ENSGAFG00000018301	pcbp4	57	63.971	ENSFHEG00000002769	-	58	63.971	Fundulus_heteroclitus
ENSGAFG00000018301	pcbp4	64	87.500	ENSGACG00000002664	-	50	86.842	Gasterosteus_aculeatus
ENSGAFG00000018301	pcbp4	63	77.483	ENSGGOG00000012474	PCBP4	50	50.962	Gorilla_gorilla
ENSGAFG00000018301	pcbp4	64	96.711	ENSHBUG00000009472	pcbp4	56	83.240	Haplochromis_burtoni
ENSGAFG00000018301	pcbp4	76	77.049	ENSHCOG00000010838	-	50	77.049	Hippocampus_comes
ENSGAFG00000018301	pcbp4	69	87.879	ENSIPUG00000008212	pcbp4	66	87.879	Ictalurus_punctatus
ENSGAFG00000018301	pcbp4	73	79.310	ENSKMAG00000017554	-	51	88.000	Kryptolebias_marmoratus
ENSGAFG00000018301	pcbp4	63	83.333	ENSLACG00000015899	PCBP4	85	83.333	Latimeria_chalumnae
ENSGAFG00000018301	pcbp4	68	84.472	ENSMAMG00000011364	-	60	84.472	Mastacembelus_armatus
ENSGAFG00000018301	pcbp4	64	97.368	ENSMAMG00000010163	pcbp4	52	97.368	Mastacembelus_armatus
ENSGAFG00000018301	pcbp4	64	96.711	ENSMZEG00005008852	pcbp4	56	91.515	Maylandia_zebra
ENSGAFG00000018301	pcbp4	63	74.667	ENSMGAG00000005091	-	68	74.667	Meleagris_gallopavo
ENSGAFG00000018301	pcbp4	62	87.075	ENSMMOG00000017756	pcbp4	50	87.075	Mola_mola
ENSGAFG00000018301	pcbp4	64	88.158	ENSMMOG00000020533	-	58	88.158	Mola_mola
ENSGAFG00000018301	pcbp4	61	88.194	ENSMALG00000022117	-	50	88.194	Monopterus_albus
ENSGAFG00000018301	pcbp4	64	94.737	ENSMALG00000020318	pcbp4	58	81.564	Monopterus_albus
ENSGAFG00000018301	pcbp4	63	77.483	MGP_CAROLIEiJ_G0032623	Pcbp4	100	60.577	Mus_caroli
ENSGAFG00000018301	pcbp4	63	77.483	ENSMUSG00000023495	Pcbp4	100	60.577	Mus_musculus
ENSGAFG00000018301	pcbp4	63	77.483	MGP_PahariEiJ_G0015491	Pcbp4	100	60.577	Mus_pahari
ENSGAFG00000018301	pcbp4	63	77.483	MGP_SPRETEiJ_G0033768	-	100	60.577	Mus_spretus
ENSGAFG00000018301	pcbp4	64	76.974	ENSNBRG00000007475	pcbp4	52	76.974	Neolamprologus_brichardi
ENSGAFG00000018301	pcbp4	63	88.079	ENSORLG00000009899	-	52	88.079	Oryzias_latipes
ENSGAFG00000018301	pcbp4	63	94.000	ENSORLG00000003061	pcbp4	57	94.000	Oryzias_latipes
ENSGAFG00000018301	pcbp4	64	87.500	ENSORLG00020001183	-	57	88.079	Oryzias_latipes_hni
ENSGAFG00000018301	pcbp4	63	94.000	ENSORLG00015019262	pcbp4	56	94.000	Oryzias_latipes_hsok
ENSGAFG00000018301	pcbp4	63	88.079	ENSORLG00015017819	-	51	88.079	Oryzias_latipes_hsok
ENSGAFG00000018301	pcbp4	63	88.079	ENSOMEG00000011545	-	55	87.500	Oryzias_melastigma
ENSGAFG00000018301	pcbp4	63	87.333	ENSOMEG00000003516	-	60	87.248	Oryzias_melastigma
ENSGAFG00000018301	pcbp4	64	89.474	ENSPKIG00000010244	pcbp4	51	85.093	Paramormyrops_kingsleyae
ENSGAFG00000018301	pcbp4	63	86.755	ENSPMGG00000022732	-	57	86.755	Periophthalmus_magnuspinnatus
ENSGAFG00000018301	pcbp4	59	87.857	ENSPFOG00000014474	pcbp4	67	98.246	Poecilia_formosa
ENSGAFG00000018301	pcbp4	68	65.842	ENSPLAG00000011438	-	77	65.842	Poecilia_latipinna
ENSGAFG00000018301	pcbp4	69	79.394	ENSPREG00000021498	-	56	79.394	Poecilia_reticulata
ENSGAFG00000018301	pcbp4	63	88.000	ENSPREG00000017370	-	60	88.000	Poecilia_reticulata
ENSGAFG00000018301	pcbp4	64	96.711	ENSPNYG00000019234	pcbp4	54	96.711	Pundamilia_nyererei
ENSGAFG00000018301	pcbp4	63	75.163	ENSSHAG00000007362	PCBP4	66	75.163	Sarcophilus_harrisii
ENSGAFG00000018301	pcbp4	73	88.439	ENSSMAG00000005827	pcbp4	66	88.439	Scophthalmus_maximus
ENSGAFG00000018301	pcbp4	63	98.013	ENSSDUG00000017719	pcbp4	56	98.013	Seriola_dumerili
ENSGAFG00000018301	pcbp4	63	88.742	ENSSDUG00000015540	-	60	88.158	Seriola_dumerili
ENSGAFG00000018301	pcbp4	63	88.742	ENSSLDG00000007851	-	60	88.158	Seriola_lalandi_dorsalis
ENSGAFG00000018301	pcbp4	63	98.013	ENSSLDG00000024847	-	66	98.013	Seriola_lalandi_dorsalis
ENSGAFG00000018301	pcbp4	64	86.842	ENSSPAG00000003033	-	56	86.842	Stegastes_partitus
ENSGAFG00000018301	pcbp4	64	88.816	ENSTRUG00000007426	-	59	88.816	Takifugu_rubripes
ENSGAFG00000018301	pcbp4	51	83.471	ENSXCOG00000000111	-	62	88.350	Xiphophorus_couchianus
ENSGAFG00000018301	pcbp4	99	93.671	ENSXCOG00000017325	pcbp4	100	93.671	Xiphophorus_couchianus
ENSGAFG00000018301	pcbp4	63	88.000	ENSXMAG00000024530	-	55	88.000	Xiphophorus_maculatus