EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000018373 (Gene tree)
Gene ID: -
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 3007 bases
Position: chrNHOQ01002139.1:373291-376297
Accession: ZDB-GENE-101014-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000027192	MRP-S32	PF10210.9	1.1e-34	1	1
ENSGAFP00000027188	MRP-S32	PF10210.9	1.2e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000027470	-	1353	-	ENSGAFP00000027188	145 (aa)	-	-
ENSGAFT00000027474	-	1289	-	ENSGAFP00000027192	140 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000018373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000018373's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000018373	mrpl42	100	76.712	ENSAPOG00000010677	mrpl42	100	76.712	Acanthochromis_polyacanthus
ENSGAFG00000018373	mrpl42	100	77.241	ENSAOCG00000011620	mrpl42	100	77.241	Amphiprion_ocellaris
ENSGAFG00000018373	mrpl42	100	77.241	ENSAPEG00000019516	mrpl42	100	77.241	Amphiprion_percula
ENSGAFG00000018373	mrpl42	90	76.336	ENSATEG00000014106	mrpl42	100	76.336	Anabas_testudineus
ENSGAFG00000018373	mrpl42	92	56.923	ENSACAG00000012606	MRPL42	88	56.923	Anolis_carolinensis
ENSGAFG00000018373	mrpl42	100	73.793	ENSACLG00000026856	mrpl42	100	73.793	Astatotilapia_calliptera
ENSGAFG00000018373	mrpl42	69	55.670	ENSAMXG00000035149	mrpl42	75	53.398	Astyanax_mexicanus
ENSGAFG00000018373	mrpl42	99	65.035	ENSCSEG00000010067	mrpl42	98	65.035	Cynoglossus_semilaevis
ENSGAFG00000018373	mrpl42	100	85.517	ENSCVAG00000002612	mrpl42	100	85.517	Cyprinodon_variegatus
ENSGAFG00000018373	mrpl42	100	55.862	ENSDARG00000079391	mrpl42	100	55.862	Danio_rerio
ENSGAFG00000018373	mrpl42	72	48.182	ENSEBUG00000005581	mrpl42	82	48.182	Eptatretus_burgeri
ENSGAFG00000018373	mrpl42	99	61.806	ENSELUG00000001973	mrpl42	99	61.806	Esox_lucius
ENSGAFG00000018373	mrpl42	100	82.759	ENSFHEG00000018696	mrpl42	100	82.759	Fundulus_heteroclitus
ENSGAFG00000018373	mrpl42	69	83.505	ENSGMOG00000002972	mrpl42	100	83.505	Gadus_morhua
ENSGAFG00000018373	mrpl42	69	84.375	ENSGACG00000018811	mrpl42	99	84.375	Gasterosteus_aculeatus
ENSGAFG00000018373	mrpl42	100	73.793	ENSHBUG00000015960	mrpl42	100	73.793	Haplochromis_burtoni
ENSGAFG00000018373	mrpl42	100	65.306	ENSHCOG00000014046	mrpl42	100	65.306	Hippocampus_comes
ENSGAFG00000018373	mrpl42	90	51.493	ENSIPUG00000015395	mrpl42	91	51.493	Ictalurus_punctatus
ENSGAFG00000018373	mrpl42	100	75.172	ENSKMAG00000013671	mrpl42	100	75.172	Kryptolebias_marmoratus
ENSGAFG00000018373	mrpl42	100	70.345	ENSLBEG00000028618	mrpl42	99	70.345	Labrus_bergylta
ENSGAFG00000018373	mrpl42	51	68.056	ENSLOCG00000015284	mrpl42	57	68.056	Lepisosteus_oculatus
ENSGAFG00000018373	mrpl42	100	79.310	ENSMAMG00000009737	mrpl42	100	79.310	Mastacembelus_armatus
ENSGAFG00000018373	mrpl42	100	73.793	ENSMZEG00005008545	mrpl42	96	73.793	Maylandia_zebra
ENSGAFG00000018373	mrpl42	82	62.185	ENSMMOG00000002317	mrpl42	78	62.185	Mola_mola
ENSGAFG00000018373	mrpl42	100	65.806	ENSMALG00000015794	mrpl42	96	65.806	Monopterus_albus
ENSGAFG00000018373	mrpl42	100	73.793	ENSNBRG00000003307	mrpl42	100	73.793	Neolamprologus_brichardi
ENSGAFG00000018373	mrpl42	100	73.793	ENSONIG00000011753	mrpl42	100	73.793	Oreochromis_niloticus
ENSGAFG00000018373	mrpl42	77	56.757	ENSOANG00000019984	-	75	56.757	Ornithorhynchus_anatinus
ENSGAFG00000018373	mrpl42	100	67.808	ENSORLG00000013500	mrpl42	85	67.808	Oryzias_latipes
ENSGAFG00000018373	mrpl42	100	71.233	ENSORLG00020000548	mrpl42	100	71.233	Oryzias_latipes_hni
ENSGAFG00000018373	mrpl42	100	66.897	ENSORLG00015016984	mrpl42	100	66.897	Oryzias_latipes_hsok
ENSGAFG00000018373	mrpl42	100	71.034	ENSOMEG00000010700	mrpl42	100	71.034	Oryzias_melastigma
ENSGAFG00000018373	mrpl42	100	62.585	ENSPKIG00000025457	mrpl42	100	62.585	Paramormyrops_kingsleyae
ENSGAFG00000018373	mrpl42	90	61.069	ENSPMGG00000019705	mrpl42	93	61.069	Periophthalmus_magnuspinnatus
ENSGAFG00000018373	mrpl42	72	55.556	ENSPMAG00000008091	mrpl42	70	55.556	Petromyzon_marinus
ENSGAFG00000018373	mrpl42	100	95.862	ENSPFOG00000016539	mrpl42	99	95.862	Poecilia_formosa
ENSGAFG00000018373	mrpl42	100	95.862	ENSPLAG00000001255	mrpl42	100	95.862	Poecilia_latipinna
ENSGAFG00000018373	mrpl42	100	95.172	ENSPMEG00000016462	mrpl42	100	95.172	Poecilia_mexicana
ENSGAFG00000018373	mrpl42	82	91.597	ENSPREG00000012053	mrpl42	87	91.597	Poecilia_reticulata
ENSGAFG00000018373	mrpl42	100	73.793	ENSPNYG00000009586	mrpl42	100	73.793	Pundamilia_nyererei
ENSGAFG00000018373	mrpl42	69	61.458	ENSPNAG00000020753	mrpl42	69	61.000	Pygocentrus_nattereri
ENSGAFG00000018373	mrpl42	100	73.103	ENSSMAG00000000262	mrpl42	100	73.103	Scophthalmus_maximus
ENSGAFG00000018373	mrpl42	100	75.862	ENSSDUG00000005949	mrpl42	100	75.862	Seriola_dumerili
ENSGAFG00000018373	mrpl42	100	74.483	ENSSLDG00000010159	mrpl42	100	74.483	Seriola_lalandi_dorsalis
ENSGAFG00000018373	mrpl42	100	67.586	ENSTRUG00000025949	mrpl42	99	67.586	Takifugu_rubripes
ENSGAFG00000018373	mrpl42	79	57.391	ENSXETG00000032902	mrpl42	92	57.391	Xenopus_tropicalis
ENSGAFG00000018373	mrpl42	100	82.313	ENSXCOG00000013875	mrpl42	98	82.313	Xiphophorus_couchianus