EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000018382 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162780
Alias: -
Full Name: zgc:162780
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 7359 bases
Position: chrNHOQ01000293.1:15242414-15249772
Accession: ZDB-GENE-070410-92
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000027200	Methyltransf_31	PF13847.6	1e-12	1	1
ENSGAFP00000027199	Methyltransf_31	PF13847.6	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000027483	-	1915	-	ENSGAFP00000027200	275 (aa)	-	-
ENSGAFT00000027481	-	843	-	ENSGAFP00000027199	280 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000018382's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000018382's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000018382	zgc:162780	99	44.161	ENSGAFG00000018387	-	100	44.161
ENSGAFG00000018382	zgc:162780	99	49.265	ENSGAFG00000007683	si:ch211-93g23.2	99	49.265

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000018382	zgc:162780	100	83.273	ENSAPOG00000015391	zgc:162780	100	83.273	Acanthochromis_polyacanthus
ENSGAFG00000018382	zgc:162780	99	55.882	ENSAPOG00000008054	si:ch211-93g23.2	99	56.089	Acanthochromis_polyacanthus
ENSGAFG00000018382	zgc:162780	60	56.970	ENSACIG00000024058	si:ch211-93g23.2	89	56.213	Amphilophus_citrinellus
ENSGAFG00000018382	zgc:162780	99	85.348	ENSACIG00000015409	zgc:162780	98	84.727	Amphilophus_citrinellus
ENSGAFG00000018382	zgc:162780	100	83.636	ENSAOCG00000004147	zgc:162780	100	83.636	Amphiprion_ocellaris
ENSGAFG00000018382	zgc:162780	99	56.985	ENSAOCG00000000447	-	99	57.196	Amphiprion_ocellaris
ENSGAFG00000018382	zgc:162780	60	58.788	ENSAPEG00000012843	si:ch211-93g23.2	100	58.788	Amphiprion_percula
ENSGAFG00000018382	zgc:162780	100	82.182	ENSAPEG00000008212	zgc:162780	100	82.182	Amphiprion_percula
ENSGAFG00000018382	zgc:162780	100	75.273	ENSATEG00000011843	zgc:162780	100	75.273	Anabas_testudineus
ENSGAFG00000018382	zgc:162780	99	56.250	ENSACLG00000009543	si:ch211-93g23.2	100	56.250	Astatotilapia_calliptera
ENSGAFG00000018382	zgc:162780	100	83.636	ENSACLG00000006922	zgc:162780	100	83.636	Astatotilapia_calliptera
ENSGAFG00000018382	zgc:162780	99	59.341	ENSAMXG00000040257	zgc:162780	99	59.341	Astyanax_mexicanus
ENSGAFG00000018382	zgc:162780	100	88.364	ENSCVAG00000021445	zgc:162780	100	88.364	Cyprinodon_variegatus
ENSGAFG00000018382	zgc:162780	99	52.941	ENSCVAG00000012310	si:ch211-93g23.2	99	52.941	Cyprinodon_variegatus
ENSGAFG00000018382	zgc:162780	99	61.765	ENSDARG00000069548	zgc:162780	99	61.765	Danio_rerio
ENSGAFG00000018382	zgc:162780	100	54.909	ENSDARG00000070558	si:ch211-93g23.2	100	54.909	Danio_rerio
ENSGAFG00000018382	zgc:162780	99	69.485	ENSELUG00000005357	zgc:162780	99	69.485	Esox_lucius
ENSGAFG00000018382	zgc:162780	100	86.182	ENSFHEG00000005204	zgc:162780	100	86.182	Fundulus_heteroclitus
ENSGAFG00000018382	zgc:162780	84	63.203	ENSGMOG00000005502	zgc:162780	99	63.203	Gadus_morhua
ENSGAFG00000018382	zgc:162780	99	54.212	ENSGACG00000014722	si:ch211-93g23.2	99	54.212	Gasterosteus_aculeatus
ENSGAFG00000018382	zgc:162780	100	84.000	ENSHBUG00000000524	zgc:162780	100	84.000	Haplochromis_burtoni
ENSGAFG00000018382	zgc:162780	99	56.618	ENSHBUG00000004418	si:ch211-93g23.2	100	56.618	Haplochromis_burtoni
ENSGAFG00000018382	zgc:162780	99	46.691	ENSHCOG00000009980	si:ch211-93g23.2	100	51.235	Hippocampus_comes
ENSGAFG00000018382	zgc:162780	100	78.545	ENSKMAG00000018418	zgc:162780	98	78.545	Kryptolebias_marmoratus
ENSGAFG00000018382	zgc:162780	100	80.364	ENSLBEG00000026521	zgc:162780	100	80.364	Labrus_bergylta
ENSGAFG00000018382	zgc:162780	99	56.985	ENSLBEG00000013961	si:ch211-93g23.2	100	56.985	Labrus_bergylta
ENSGAFG00000018382	zgc:162780	99	57.721	ENSLBEG00000006987	-	100	57.721	Labrus_bergylta
ENSGAFG00000018382	zgc:162780	99	77.372	ENSMAMG00000013237	zgc:162780	99	77.372	Mastacembelus_armatus
ENSGAFG00000018382	zgc:162780	99	56.250	ENSMZEG00005014627	si:ch211-93g23.2	100	56.250	Maylandia_zebra
ENSGAFG00000018382	zgc:162780	100	84.000	ENSMZEG00005000825	zgc:162780	100	84.000	Maylandia_zebra
ENSGAFG00000018382	zgc:162780	62	55.556	ENSMMOG00000019634	si:ch211-93g23.2	100	55.556	Mola_mola
ENSGAFG00000018382	zgc:162780	100	80.727	ENSMALG00000012598	zgc:162780	100	80.727	Monopterus_albus
ENSGAFG00000018382	zgc:162780	100	82.545	ENSNBRG00000014908	zgc:162780	100	82.545	Neolamprologus_brichardi
ENSGAFG00000018382	zgc:162780	99	56.250	ENSNBRG00000019105	si:ch211-93g23.2	100	56.250	Neolamprologus_brichardi
ENSGAFG00000018382	zgc:162780	99	58.088	ENSONIG00000013383	si:ch211-93g23.2	100	58.088	Oreochromis_niloticus
ENSGAFG00000018382	zgc:162780	100	83.636	ENSONIG00000004462	zgc:162780	100	83.636	Oreochromis_niloticus
ENSGAFG00000018382	zgc:162780	99	56.250	ENSORLG00000002372	si:ch211-93g23.2	100	56.250	Oryzias_latipes
ENSGAFG00000018382	zgc:162780	99	56.250	ENSORLG00020022021	si:ch211-93g23.2	100	56.250	Oryzias_latipes_hni
ENSGAFG00000018382	zgc:162780	100	79.273	ENSORLG00015008510	zgc:162780	100	79.273	Oryzias_latipes_hsok
ENSGAFG00000018382	zgc:162780	99	55.515	ENSORLG00015021473	si:ch211-93g23.2	100	55.515	Oryzias_latipes_hsok
ENSGAFG00000018382	zgc:162780	99	56.985	ENSOMEG00000013365	si:ch211-93g23.2	100	56.985	Oryzias_melastigma
ENSGAFG00000018382	zgc:162780	100	78.909	ENSOMEG00000010679	zgc:162780	100	78.909	Oryzias_melastigma
ENSGAFG00000018382	zgc:162780	100	63.636	ENSPKIG00000011610	si:ch211-93g23.2	100	63.636	Paramormyrops_kingsleyae
ENSGAFG00000018382	zgc:162780	61	55.357	ENSPMGG00000011829	si:ch211-93g23.2	98	55.357	Periophthalmus_magnuspinnatus
ENSGAFG00000018382	zgc:162780	99	54.044	ENSPFOG00000013857	si:ch211-93g23.2	99	54.044	Poecilia_formosa
ENSGAFG00000018382	zgc:162780	100	95.636	ENSPFOG00000002781	zgc:162780	100	95.636	Poecilia_formosa
ENSGAFG00000018382	zgc:162780	59	55.215	ENSPLAG00000015878	-	97	55.215	Poecilia_latipinna
ENSGAFG00000018382	zgc:162780	100	95.273	ENSPLAG00000010255	zgc:162780	100	95.273	Poecilia_latipinna
ENSGAFG00000018382	zgc:162780	100	95.636	ENSPMEG00000000022	zgc:162780	100	95.636	Poecilia_mexicana
ENSGAFG00000018382	zgc:162780	97	53.008	ENSPMEG00000008837	-	99	54.217	Poecilia_mexicana
ENSGAFG00000018382	zgc:162780	100	93.571	ENSPREG00000016480	zgc:162780	99	93.571	Poecilia_reticulata
ENSGAFG00000018382	zgc:162780	99	52.574	ENSPREG00000016831	si:ch211-93g23.2	97	55.828	Poecilia_reticulata
ENSGAFG00000018382	zgc:162780	100	82.545	ENSPNYG00000009882	zgc:162780	100	82.545	Pundamilia_nyererei
ENSGAFG00000018382	zgc:162780	99	55.882	ENSPNYG00000009369	si:ch211-93g23.2	100	55.882	Pundamilia_nyererei
ENSGAFG00000018382	zgc:162780	99	57.353	ENSPNAG00000026108	zgc:162780	99	57.353	Pygocentrus_nattereri
ENSGAFG00000018382	zgc:162780	99	55.839	ENSSFOG00015018587	si:ch211-93g23.2	99	55.839	Scleropages_formosus
ENSGAFG00000018382	zgc:162780	100	78.909	ENSSMAG00000004498	zgc:162780	100	78.909	Scophthalmus_maximus
ENSGAFG00000018382	zgc:162780	100	82.545	ENSSDUG00000010324	zgc:162780	100	82.545	Seriola_dumerili
ENSGAFG00000018382	zgc:162780	59	60.123	ENSSDUG00000022311	si:ch211-93g23.2	98	60.123	Seriola_dumerili
ENSGAFG00000018382	zgc:162780	100	83.636	ENSSLDG00000021444	zgc:162780	100	83.636	Seriola_lalandi_dorsalis
ENSGAFG00000018382	zgc:162780	99	57.353	ENSSLDG00000005926	si:ch211-93g23.2	100	57.353	Seriola_lalandi_dorsalis
ENSGAFG00000018382	zgc:162780	60	56.024	ENSSPAG00000014251	si:ch211-93g23.2	92	56.024	Stegastes_partitus
ENSGAFG00000018382	zgc:162780	99	54.044	ENSTRUG00000014609	si:ch211-93g23.2	99	54.044	Takifugu_rubripes
ENSGAFG00000018382	zgc:162780	99	54.412	ENSTNIG00000000686	-	99	54.412	Tetraodon_nigroviridis
ENSGAFG00000018382	zgc:162780	59	53.374	ENSXCOG00000020437	si:ch211-93g23.2	97	53.374	Xiphophorus_couchianus
ENSGAFG00000018382	zgc:162780	100	94.545	ENSXCOG00000014527	zgc:162780	100	94.545	Xiphophorus_couchianus
ENSGAFG00000018382	zgc:162780	99	52.206	ENSXMAG00000007855	si:ch211-93g23.2	99	52.206	Xiphophorus_maculatus
ENSGAFG00000018382	zgc:162780	100	95.357	ENSXMAG00000026715	zgc:162780	100	95.357	Xiphophorus_maculatus