EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000018470 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5905 bases
Position: chrNHOQ01002899.1:93966-99870
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000027332	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000027615	-	780	-	ENSGAFP00000027332	259 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000018470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000018470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000018470	-	73	38.095	ENSGAFG00000005050	-	72	38.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000018470	-	77	40.500	ENSAPOG00000006213	-	68	40.500	Acanthochromis_polyacanthus
ENSGAFG00000018470	-	87	43.723	ENSACIG00000023712	-	57	43.723	Amphilophus_citrinellus
ENSGAFG00000018470	-	76	42.289	ENSACIG00000014950	-	85	42.289	Amphilophus_citrinellus
ENSGAFG00000018470	-	80	66.505	ENSATEG00000008595	-	73	66.505	Anabas_testudineus
ENSGAFG00000018470	-	80	76.699	ENSACLG00000023033	-	52	76.699	Astatotilapia_calliptera
ENSGAFG00000018470	-	89	42.254	ENSAMXG00000030535	-	59	42.786	Astyanax_mexicanus
ENSGAFG00000018470	-	76	48.744	ENSCVAG00000014791	-	53	48.744	Cyprinodon_variegatus
ENSGAFG00000018470	-	90	40.426	ENSCVAG00000022669	-	82	40.426	Cyprinodon_variegatus
ENSGAFG00000018470	-	76	42.424	ENSCVAG00000022676	-	59	42.424	Cyprinodon_variegatus
ENSGAFG00000018470	-	84	41.892	ENSDARG00000039888	CR855393.1	61	41.892	Danio_rerio
ENSGAFG00000018470	-	98	40.000	ENSDARG00000076398	si:dkey-201l21.4	59	40.000	Danio_rerio
ENSGAFG00000018470	-	89	40.517	ENSDARG00000100858	zgc:171695	53	40.517	Danio_rerio
ENSGAFG00000018470	-	88	43.478	ENSELUG00000022148	-	51	43.478	Esox_lucius
ENSGAFG00000018470	-	76	41.206	ENSELUG00000008413	-	53	39.269	Esox_lucius
ENSGAFG00000018470	-	84	38.565	ENSFHEG00000002160	-	70	38.565	Fundulus_heteroclitus
ENSGAFG00000018470	-	76	66.834	ENSGMOG00000019786	-	98	66.834	Gadus_morhua
ENSGAFG00000018470	-	76	67.677	ENSGMOG00000020059	-	97	67.677	Gadus_morhua
ENSGAFG00000018470	-	75	64.103	ENSGMOG00000008232	-	55	67.204	Gadus_morhua
ENSGAFG00000018470	-	65	63.905	ENSGMOG00000019744	-	96	63.905	Gadus_morhua
ENSGAFG00000018470	-	68	67.045	ENSGMOG00000020208	-	97	67.045	Gadus_morhua
ENSGAFG00000018470	-	76	66.500	ENSGACG00000015787	-	91	66.500	Gasterosteus_aculeatus
ENSGAFG00000018470	-	89	41.277	ENSGACG00000005035	-	59	41.277	Gasterosteus_aculeatus
ENSGAFG00000018470	-	91	39.241	ENSGACG00000015437	-	59	39.241	Gasterosteus_aculeatus
ENSGAFG00000018470	-	76	42.929	ENSHBUG00000023729	-	52	42.929	Haplochromis_burtoni
ENSGAFG00000018470	-	83	43.519	ENSHBUG00000007413	-	85	43.519	Haplochromis_burtoni
ENSGAFG00000018470	-	78	41.667	ENSIPUG00000000082	-	86	41.667	Ictalurus_punctatus
ENSGAFG00000018470	-	84	43.946	ENSIPUG00000009201	-	87	43.946	Ictalurus_punctatus
ENSGAFG00000018470	-	82	42.202	ENSIPUG00000013512	-	52	42.202	Ictalurus_punctatus
ENSGAFG00000018470	-	85	35.135	ENSLBEG00000019795	-	91	35.135	Labrus_bergylta
ENSGAFG00000018470	-	90	65.236	ENSLBEG00000012781	-	88	65.236	Labrus_bergylta
ENSGAFG00000018470	-	91	70.293	ENSLBEG00000028432	-	90	70.293	Labrus_bergylta
ENSGAFG00000018470	-	85	56.818	ENSLOCG00000017620	-	64	56.818	Lepisosteus_oculatus
ENSGAFG00000018470	-	81	67.943	ENSMAMG00000015204	-	83	67.943	Mastacembelus_armatus
ENSGAFG00000018470	-	76	43.434	ENSMZEG00005023309	-	52	43.434	Maylandia_zebra
ENSGAFG00000018470	-	77	43.284	ENSMZEG00005023315	-	51	43.284	Maylandia_zebra
ENSGAFG00000018470	-	76	43.434	ENSMZEG00005004397	-	67	43.655	Maylandia_zebra
ENSGAFG00000018470	-	84	42.222	ENSMMOG00000015162	-	86	42.222	Mola_mola
ENSGAFG00000018470	-	88	39.565	ENSMMOG00000011295	-	82	39.565	Mola_mola
ENSGAFG00000018470	-	73	45.789	ENSNBRG00000006565	-	60	45.789	Neolamprologus_brichardi
ENSGAFG00000018470	-	88	41.048	ENSONIG00000017927	-	67	41.048	Oreochromis_niloticus
ENSGAFG00000018470	-	84	36.818	ENSONIG00000013617	-	51	36.818	Oreochromis_niloticus
ENSGAFG00000018470	-	96	38.095	ENSONIG00000013895	-	97	38.095	Oreochromis_niloticus
ENSGAFG00000018470	-	70	33.158	ENSPMGG00000008676	-	51	33.158	Periophthalmus_magnuspinnatus
ENSGAFG00000018470	-	83	41.743	ENSPMGG00000002690	-	59	41.743	Periophthalmus_magnuspinnatus
ENSGAFG00000018470	-	85	41.256	ENSPMGG00000020583	-	53	41.256	Periophthalmus_magnuspinnatus
ENSGAFG00000018470	-	84	52.294	ENSPMGG00000016292	-	53	52.294	Periophthalmus_magnuspinnatus
ENSGAFG00000018470	-	85	39.013	ENSPMGG00000016798	-	54	39.013	Periophthalmus_magnuspinnatus
ENSGAFG00000018470	-	88	41.126	ENSPLAG00000019926	-	82	41.126	Poecilia_latipinna
ENSGAFG00000018470	-	87	43.147	ENSPREG00000007255	-	51	43.147	Poecilia_reticulata
ENSGAFG00000018470	-	92	70.464	ENSPNYG00000016575	-	80	70.464	Pundamilia_nyererei
ENSGAFG00000018470	-	75	34.872	ENSPNAG00000011130	-	65	34.872	Pygocentrus_nattereri
ENSGAFG00000018470	-	77	41.089	ENSSDUG00000021349	-	87	41.089	Seriola_dumerili
ENSGAFG00000018470	-	88	56.140	ENSSDUG00000005919	-	79	56.140	Seriola_dumerili
ENSGAFG00000018470	-	87	57.522	ENSSDUG00000000370	-	89	57.522	Seriola_dumerili
ENSGAFG00000018470	-	85	57.991	ENSSDUG00000000316	-	90	57.991	Seriola_dumerili
ENSGAFG00000018470	-	74	42.487	ENSSLDG00000018054	-	78	42.487	Seriola_lalandi_dorsalis
ENSGAFG00000018470	-	84	67.281	ENSSLDG00000017661	-	94	67.281	Seriola_lalandi_dorsalis
ENSGAFG00000018470	-	71	42.391	ENSSPAG00000015996	-	69	42.391	Stegastes_partitus
ENSGAFG00000018470	-	90	74.138	ENSSPAG00000003300	-	91	74.138	Stegastes_partitus
ENSGAFG00000018470	-	73	42.408	ENSTRUG00000021059	-	70	42.408	Takifugu_rubripes
ENSGAFG00000018470	-	88	42.489	ENSTRUG00000001460	-	71	42.489	Takifugu_rubripes
ENSGAFG00000018470	-	88	40.000	ENSTRUG00000017314	-	95	40.000	Takifugu_rubripes
ENSGAFG00000018470	-	88	41.631	ENSTNIG00000005878	-	61	41.631	Tetraodon_nigroviridis
ENSGAFG00000018470	-	83	41.667	ENSTNIG00000003332	-	54	41.667	Tetraodon_nigroviridis
ENSGAFG00000018470	-	95	41.600	ENSXCOG00000001022	-	57	41.600	Xiphophorus_couchianus