EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000018496 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 4002 bases
Position: chrNHOQ01002753.1:35959-39960
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000027889	RRM_1	PF00076.22	3.2e-32	1	2
ENSGAFP00000027889	RRM_1	PF00076.22	3.2e-32	2	2
ENSGAFP00000027669	RRM_1	PF00076.22	3.5e-32	1	2
ENSGAFP00000027669	RRM_1	PF00076.22	3.5e-32	2	2
ENSGAFP00000027968	RRM_1	PF00076.22	4.7e-23	1	2
ENSGAFP00000027968	RRM_1	PF00076.22	4.7e-23	2	2
ENSGAFP00000027989	RRM_1	PF00076.22	2.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000027954	-	1053	-	ENSGAFP00000027669	350 (aa)	-	-
ENSGAFT00000028255	-	822	-	ENSGAFP00000027968	273 (aa)	-	-
ENSGAFT00000028276	-	789	-	ENSGAFP00000027989	262 (aa)	-	-
ENSGAFT00000028175	-	1023	-	ENSGAFP00000027889	340 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000018496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000018496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000018496	srsf4	60	41.379	ENSGAFG00000000609	-	86	35.135
ENSGAFG00000018496	srsf4	63	58.889	ENSGAFG00000002865	srsf5b	77	52.075
ENSGAFG00000018496	srsf4	65	34.031	ENSGAFG00000009123	srsf9	85	43.850
ENSGAFG00000018496	srsf4	64	55.618	ENSGAFG00000018237	srsf5a	82	50.951
ENSGAFG00000018496	srsf4	62	40.223	ENSGAFG00000012721	-	66	47.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000018496	srsf4	72	86.765	ENSG00000116350	SRSF4	76	70.588	Homo_sapiens
ENSGAFG00000018496	srsf4	92	95.588	ENSAPOG00000020244	srsf4	73	94.203	Acanthochromis_polyacanthus
ENSGAFG00000018496	srsf4	65	68.852	ENSAPOG00000023399	-	87	54.789	Acanthochromis_polyacanthus
ENSGAFG00000018496	srsf4	65	76.796	ENSAMEG00000000594	SRSF4	51	61.328	Ailuropoda_melanoleuca
ENSGAFG00000018496	srsf4	66	82.514	ENSACIG00000018649	srsf4	91	95.588	Amphilophus_citrinellus
ENSGAFG00000018496	srsf4	59	80.723	ENSAOCG00000005997	srsf4	92	95.652	Amphiprion_ocellaris
ENSGAFG00000018496	srsf4	70	62.642	ENSAPEG00000020826	srsf4	84	64.469	Amphiprion_percula
ENSGAFG00000018496	srsf4	81	77.119	ENSATEG00000005680	srsf4	89	72.963	Anabas_testudineus
ENSGAFG00000018496	srsf4	71	85.507	ENSANAG00000037134	SRSF4	59	64.609	Aotus_nancymaae
ENSGAFG00000018496	srsf4	76	94.203	ENSACLG00000003395	srsf4	93	95.588	Astatotilapia_calliptera
ENSGAFG00000018496	srsf4	65	70.166	ENSACLG00000021269	-	51	78.142	Astatotilapia_calliptera
ENSGAFG00000018496	srsf4	98	62.687	ENSAMXG00000034811	srsf4	87	88.235	Astyanax_mexicanus
ENSGAFG00000018496	srsf4	68	46.890	WBGene00004698	rsp-1	97	53.793	Caenorhabditis_elegans
ENSGAFG00000018496	srsf4	65	76.796	ENSCJAG00000047192	SRSF4	50	61.328	Callithrix_jacchus
ENSGAFG00000018496	srsf4	69	85.507	ENSCHIG00000022096	SRSF4	68	59.286	Capra_hircus
ENSGAFG00000018496	srsf4	65	76.796	ENSCPOG00000036234	SRSF4	50	62.055	Cavia_porcellus
ENSGAFG00000018496	srsf4	72	85.507	ENSCLAG00000009008	SRSF4	50	62.055	Chinchilla_lanigera
ENSGAFG00000018496	srsf4	53	81.560	ENSCHOG00000013858	SRSF4	60	53.425	Choloepus_hoffmanni
ENSGAFG00000018496	srsf4	65	76.796	ENSCPBG00000009020	SRSF4	50	61.719	Chrysemys_picta_bellii
ENSGAFG00000018496	srsf4	65	53.608	ENSCING00000020631	-	80	61.538	Ciona_intestinalis
ENSGAFG00000018496	srsf4	63	51.813	ENSCING00000024718	-	75	49.254	Ciona_intestinalis
ENSGAFG00000018496	srsf4	65	54.950	ENSCING00000012370	-	68	62.312	Ciona_intestinalis
ENSGAFG00000018496	srsf4	80	44.178	ENSCING00000011362	-	65	60.541	Ciona_intestinalis
ENSGAFG00000018496	srsf4	64	59.551	ENSCSAVG00000002581	-	97	47.451	Ciona_savignyi
ENSGAFG00000018496	srsf4	69	73.711	ENSCGRG00001021115	Srsf4	52	61.328	Cricetulus_griseus_chok1gshd
ENSGAFG00000018496	srsf4	66	94.203	ENSCSEG00000010058	srsf4	75	93.443	Cynoglossus_semilaevis
ENSGAFG00000018496	srsf4	83	63.090	ENSCVAG00000004342	srsf4	85	67.073	Cyprinodon_variegatus
ENSGAFG00000018496	srsf4	65	78.889	ENSDARG00000105293	srsf4	79	89.286	Danio_rerio
ENSGAFG00000018496	srsf4	71	85.507	ENSDNOG00000047961	SRSF4	60	56.707	Dasypus_novemcinctus
ENSGAFG00000018496	srsf4	64	58.470	FBgn0004587	B52	97	61.194	Drosophila_melanogaster
ENSGAFG00000018496	srsf4	54	64.085	ENSEBUG00000003129	srsf4	69	61.392	Eptatretus_burgeri
ENSGAFG00000018496	srsf4	71	53.266	ENSEBUG00000001681	srsf4	67	61.111	Eptatretus_burgeri
ENSGAFG00000018496	srsf4	65	76.796	ENSEASG00005010168	SRSF4	50	61.328	Equus_asinus_asinus
ENSGAFG00000018496	srsf4	65	76.796	ENSECAG00000021350	SRSF4	50	61.328	Equus_caballus
ENSGAFG00000018496	srsf4	98	65.886	ENSELUG00000017551	srsf4	93	77.099	Esox_lucius
ENSGAFG00000018496	srsf4	65	76.796	ENSFCAG00000027821	SRSF4	52	64.981	Felis_catus
ENSGAFG00000018496	srsf4	98	95.588	ENSFHEG00000007472	srsf4	91	98.824	Fundulus_heteroclitus
ENSGAFG00000018496	srsf4	65	78.889	ENSGMOG00000012906	srsf4	57	90.556	Gadus_morhua
ENSGAFG00000018496	srsf4	53	95.588	ENSGACG00000002389	srsf4	56	93.333	Gasterosteus_aculeatus
ENSGAFG00000018496	srsf4	65	76.796	ENSGAGG00000014836	SRSF4	50	62.109	Gopherus_agassizii
ENSGAFG00000018496	srsf4	65	70.166	ENSHBUG00000011326	-	70	60.232	Haplochromis_burtoni
ENSGAFG00000018496	srsf4	65	76.796	ENSHGLG00000011842	SRSF4	51	62.055	Heterocephalus_glaber_female
ENSGAFG00000018496	srsf4	65	76.796	ENSHGLG00100017279	SRSF4	51	62.055	Heterocephalus_glaber_male
ENSGAFG00000018496	srsf4	78	94.118	ENSHCOG00000012540	srsf4	89	91.176	Hippocampus_comes
ENSGAFG00000018496	srsf4	71	85.507	ENSSTOG00000015908	SRSF4	51	61.328	Ictidomys_tridecemlineatus
ENSGAFG00000018496	srsf4	65	76.796	ENSJJAG00000022153	Srsf4	51	69.960	Jaculus_jaculus
ENSGAFG00000018496	srsf4	83	95.588	ENSKMAG00000013631	srsf4	91	81.545	Kryptolebias_marmoratus
ENSGAFG00000018496	srsf4	64	67.956	ENSLOCG00000001442	-	50	80.435	Lepisosteus_oculatus
ENSGAFG00000018496	srsf4	79	66.554	ENSLAFG00000002575	SRSF4	59	70.428	Loxodonta_africana
ENSGAFG00000018496	srsf4	83	95.588	ENSMAMG00000004888	srsf4	89	95.588	Mastacembelus_armatus
ENSGAFG00000018496	srsf4	82	67.755	ENSMZEG00005026275	srsf4	98	76.022	Maylandia_zebra
ENSGAFG00000018496	srsf4	75	85.507	ENSMAUG00000021940	Srsf4	53	64.885	Mesocricetus_auratus
ENSGAFG00000018496	srsf4	65	76.796	ENSMICG00000043567	SRSF4	51	61.328	Microcebus_murinus
ENSGAFG00000018496	srsf4	65	76.796	ENSMOCG00000013319	Srsf4	51	61.328	Microtus_ochrogaster
ENSGAFG00000018496	srsf4	96	94.737	ENSMMOG00000013653	srsf4	90	95.588	Mola_mola
ENSGAFG00000018496	srsf4	65	77.348	ENSMODG00000011052	SRSF4	65	84.615	Monodelphis_domestica
ENSGAFG00000018496	srsf4	85	95.588	ENSMALG00000013392	srsf4	92	78.134	Monopterus_albus
ENSGAFG00000018496	srsf4	65	76.796	MGP_CAROLIEiJ_G0026555	Srsf4	51	61.328	Mus_caroli
ENSGAFG00000018496	srsf4	75	85.507	ENSMUSG00000028911	Srsf4	51	61.328	Mus_musculus
ENSGAFG00000018496	srsf4	65	76.796	MGP_PahariEiJ_G0028887	Srsf4	52	61.328	Mus_pahari
ENSGAFG00000018496	srsf4	65	76.796	MGP_SPRETEiJ_G0027535	Srsf4	51	61.328	Mus_spretus
ENSGAFG00000018496	srsf4	65	76.796	ENSMPUG00000015470	SRSF4	61	58.967	Mustela_putorius_furo
ENSGAFG00000018496	srsf4	63	76.966	ENSMLUG00000014770	SRSF4	50	60.870	Myotis_lucifugus
ENSGAFG00000018496	srsf4	65	76.796	ENSNGAG00000012225	Srsf4	52	85.507	Nannospalax_galili
ENSGAFG00000018496	srsf4	65	62.295	ENSNLEG00000030787	-	90	51.527	Nomascus_leucogenys
ENSGAFG00000018496	srsf4	65	76.243	ENSOPRG00000010098	SRSF4	50	63.008	Ochotona_princeps
ENSGAFG00000018496	srsf4	65	76.796	ENSODEG00000003230	SRSF4	50	62.055	Octodon_degus
ENSGAFG00000018496	srsf4	65	84.444	ENSONIG00000013730	srsf4	60	69.048	Oreochromis_niloticus
ENSGAFG00000018496	srsf4	53	83.688	ENSOANG00000015169	SRSF4	59	58.300	Ornithorhynchus_anatinus
ENSGAFG00000018496	srsf4	69	97.368	ENSORLG00020016052	srsf4	91	75.889	Oryzias_latipes_hni
ENSGAFG00000018496	srsf4	92	95.588	ENSORLG00015007566	srsf4	91	95.588	Oryzias_latipes_hsok
ENSGAFG00000018496	srsf4	92	95.588	ENSOMEG00000005541	srsf4	93	75.522	Oryzias_melastigma
ENSGAFG00000018496	srsf4	65	76.796	ENSOGAG00000015515	SRSF4	51	61.328	Otolemur_garnettii
ENSGAFG00000018496	srsf4	53	82.979	ENSOARG00000002451	SRSF4	68	62.736	Ovis_aries
ENSGAFG00000018496	srsf4	65	76.796	ENSPPRG00000016248	SRSF4	52	64.981	Panthera_pardus
ENSGAFG00000018496	srsf4	76	68.644	ENSPMGG00000013436	srsf4	95	88.281	Periophthalmus_magnuspinnatus
ENSGAFG00000018496	srsf4	64	59.116	ENSPMAG00000009397	srsf4	91	51.538	Petromyzon_marinus
ENSGAFG00000018496	srsf4	92	95.588	ENSPFOG00000001306	srsf4	94	90.196	Poecilia_formosa
ENSGAFG00000018496	srsf4	92	95.588	ENSPLAG00000008812	srsf4	91	95.652	Poecilia_latipinna
ENSGAFG00000018496	srsf4	100	91.209	ENSPMEG00000023638	srsf4	99	91.209	Poecilia_mexicana
ENSGAFG00000018496	srsf4	94	90.937	ENSPREG00000009639	srsf4	92	95.652	Poecilia_reticulata
ENSGAFG00000018496	srsf4	65	76.796	ENSPCOG00000027341	SRSF4	51	61.328	Propithecus_coquereli
ENSGAFG00000018496	srsf4	66	83.607	ENSPNYG00000003796	srsf4	91	67.230	Pundamilia_nyererei
ENSGAFG00000018496	srsf4	92	59.272	ENSPNAG00000023844	srsf4	54	91.573	Pygocentrus_nattereri
ENSGAFG00000018496	srsf4	65	76.796	ENSRNOG00000010007	Srsf4	52	61.328	Rattus_norvegicus
ENSGAFG00000018496	srsf4	65	76.796	ENSSBOG00000027098	SRSF4	50	61.328	Saimiri_boliviensis_boliviensis
ENSGAFG00000018496	srsf4	58	79.221	ENSSHAG00000012407	SRSF4	51	85.135	Sarcophilus_harrisii
ENSGAFG00000018496	srsf4	66	79.348	ENSSFOG00015020292	srsf4	82	92.035	Scleropages_formosus
ENSGAFG00000018496	srsf4	66	84.409	ENSSMAG00000001707	srsf4	50	94.054	Scophthalmus_maximus
ENSGAFG00000018496	srsf4	87	71.617	ENSSDUG00000007387	srsf4	70	94.203	Seriola_dumerili
ENSGAFG00000018496	srsf4	76	65.000	ENSSLDG00000009745	srsf4	89	59.924	Seriola_lalandi_dorsalis
ENSGAFG00000018496	srsf4	98	84.058	ENSSPUG00000015318	-	52	60.938	Sphenodon_punctatus
ENSGAFG00000018496	srsf4	94	95.588	ENSSPAG00000014538	srsf4	90	95.588	Stegastes_partitus
ENSGAFG00000018496	srsf4	65	76.796	ENSSSCG00000003589	SRSF4	50	62.602	Sus_scrofa
ENSGAFG00000018496	srsf4	89	71.161	ENSTRUG00000011891	srsf4	74	92.754	Takifugu_rubripes
ENSGAFG00000018496	srsf4	66	83.696	ENSTNIG00000005573	srsf4	61	65.873	Tetraodon_nigroviridis
ENSGAFG00000018496	srsf4	65	76.796	ENSTTRG00000002572	SRSF4	62	58.104	Tursiops_truncatus
ENSGAFG00000018496	srsf4	65	76.796	ENSUAMG00000006106	SRSF4	52	64.981	Ursus_americanus
ENSGAFG00000018496	srsf4	71	75.000	ENSXCOG00000003212	-	75	57.752	Xiphophorus_couchianus
ENSGAFG00000018496	srsf4	95	95.588	ENSXCOG00000018826	srsf4	93	95.082	Xiphophorus_couchianus
ENSGAFG00000018496	srsf4	71	91.525	ENSXMAG00000005545	srsf4	78	82.072	Xiphophorus_maculatus