EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000018506 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 6098 bases
Position: chrNHOQ01002899.1:196707-202804
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000027392	zf-C2H2	PF00096.26	4.3e-21	1	3
ENSGAFP00000027392	zf-C2H2	PF00096.26	4.3e-21	2	3
ENSGAFP00000027392	zf-C2H2	PF00096.26	4.3e-21	3	3
ENSGAFP00000027392	zf-met	PF12874.7	6.3e-08	1	2
ENSGAFP00000027392	zf-met	PF12874.7	6.3e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000027675	-	5201	-	ENSGAFP00000027392	407 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000018506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000018506's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000018506	-	74	51.724	ENSGAFG00000011938	-	97	51.724
ENSGAFG00000018506	-	75	46.087	ENSGAFG00000014097	-	92	46.087
ENSGAFG00000018506	-	64	50.435	ENSGAFG00000013677	-	93	50.435
ENSGAFG00000018506	-	68	41.026	ENSGAFG00000011287	-	76	41.026
ENSGAFG00000018506	-	97	45.455	ENSGAFG00000002659	-	63	45.455
ENSGAFG00000018506	-	68	45.763	ENSGAFG00000013624	-	67	45.763
ENSGAFG00000018506	-	75	48.810	ENSGAFG00000013420	-	84	48.810
ENSGAFG00000018506	-	68	48.148	ENSGAFG00000013390	-	81	48.148
ENSGAFG00000018506	-	68	52.542	ENSGAFG00000013396	-	94	52.542
ENSGAFG00000018506	-	71	47.826	ENSGAFG00000018302	-	88	47.826
ENSGAFG00000018506	-	69	45.872	ENSGAFG00000014085	-	81	45.872
ENSGAFG00000018506	-	64	53.043	ENSGAFG00000013616	-	86	53.043
ENSGAFG00000018506	-	64	51.304	ENSGAFG00000014188	-	96	49.123
ENSGAFG00000018506	-	56	47.561	ENSGAFG00000011999	-	82	48.148
ENSGAFG00000018506	-	55	47.126	ENSGAFG00000012035	-	85	45.570
ENSGAFG00000018506	-	67	46.018	ENSGAFG00000016976	-	66	45.217
ENSGAFG00000018506	-	68	48.673	ENSGAFG00000014369	-	93	51.304
ENSGAFG00000018506	-	58	45.455	ENSGAFG00000011326	-	94	46.087
ENSGAFG00000018506	-	64	42.727	ENSGAFG00000013491	-	94	49.550

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000018506	-	100	54.699	ENSAPOG00000022184	-	100	54.327	Acanthochromis_polyacanthus
ENSGAFG00000018506	-	99	45.690	ENSAPOG00000023008	-	61	46.087	Acanthochromis_polyacanthus
ENSGAFG00000018506	-	99	45.217	ENSACIG00000022738	-	90	45.977	Amphilophus_citrinellus
ENSGAFG00000018506	-	100	54.177	ENSAOCG00000022836	-	100	53.461	Amphiprion_ocellaris
ENSGAFG00000018506	-	99	46.552	ENSAOCG00000016409	-	69	46.552	Amphiprion_ocellaris
ENSGAFG00000018506	-	99	46.552	ENSAPEG00000008746	-	69	46.552	Amphiprion_percula
ENSGAFG00000018506	-	100	53.919	ENSAPEG00000003776	-	100	53.207	Amphiprion_percula
ENSGAFG00000018506	-	99	47.059	ENSATEG00000015238	-	81	47.826	Anabas_testudineus
ENSGAFG00000018506	-	99	50.215	ENSATEG00000014684	-	94	82.727	Anabas_testudineus
ENSGAFG00000018506	-	60	33.548	ENSCSEG00000019848	-	89	38.760	Cynoglossus_semilaevis
ENSGAFG00000018506	-	99	47.561	ENSIPUG00000022266	ZNF135	61	47.561	Ictalurus_punctatus
ENSGAFG00000018506	-	100	63.934	ENSKMAG00000000427	-	98	63.488	Kryptolebias_marmoratus
ENSGAFG00000018506	-	99	49.398	ENSKMAG00000015304	-	74	49.398	Kryptolebias_marmoratus
ENSGAFG00000018506	-	58	51.079	ENSLBEG00000009663	-	89	51.079	Labrus_bergylta
ENSGAFG00000018506	-	99	52.298	ENSLBEG00000026060	-	99	52.298	Labrus_bergylta
ENSGAFG00000018506	-	99	50.602	ENSMAMG00000010902	-	58	50.602	Mastacembelus_armatus
ENSGAFG00000018506	-	55	47.826	ENSMMOG00000009252	-	72	47.826	Mola_mola
ENSGAFG00000018506	-	99	49.398	ENSMALG00000011756	-	68	49.398	Monopterus_albus
ENSGAFG00000018506	-	99	92.365	ENSPLAG00000011958	-	99	92.611	Poecilia_latipinna
ENSGAFG00000018506	-	64	47.788	ENSPMEG00000022651	-	91	47.788	Poecilia_mexicana
ENSGAFG00000018506	-	99	92.157	ENSPMEG00000006760	-	99	92.647	Poecilia_mexicana
ENSGAFG00000018506	-	100	91.484	ENSPREG00000021124	-	100	91.727	Poecilia_reticulata
ENSGAFG00000018506	-	53	51.695	ENSSFOG00015006083	-	63	51.695	Scleropages_formosus
ENSGAFG00000018506	-	95	41.250	ENSSMAG00000013663	-	89	58.000	Scophthalmus_maximus
ENSGAFG00000018506	-	99	50.602	ENSSDUG00000015013	-	68	49.020	Seriola_dumerili
ENSGAFG00000018506	-	99	50.602	ENSSLDG00000021278	-	60	49.020	Seriola_lalandi_dorsalis
ENSGAFG00000018506	-	55	48.193	ENSSPAG00000007403	-	86	55.738	Stegastes_partitus
ENSGAFG00000018506	-	73	53.894	ENSSPAG00000008950	-	54	82.653	Stegastes_partitus
ENSGAFG00000018506	-	50	37.363	ENSXCOG00000013306	-	82	37.363	Xiphophorus_couchianus
ENSGAFG00000018506	-	50	87.192	ENSXMAG00000022894	-	74	87.192	Xiphophorus_maculatus
ENSGAFG00000018506	-	64	47.788	ENSXMAG00000024973	-	94	47.788	Xiphophorus_maculatus