EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000018508 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 1943 bases
Position: chrNHOQ01002899.1:205678-207620
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000027395	zf-C2H2	PF00096.26	9.8e-16	1	3
ENSGAFP00000027395	zf-C2H2	PF00096.26	9.8e-16	2	3
ENSGAFP00000027395	zf-C2H2	PF00096.26	9.8e-16	3	3
ENSGAFP00000027395	zf-met	PF12874.7	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000027678	-	606	-	ENSGAFP00000027395	201 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000018508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000018508's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000018508	-	62	44.262	ENSGAFG00000008274	-	83	44.156
ENSGAFG00000018508	-	60	42.667	ENSGAFG00000012069	-	84	42.667
ENSGAFG00000018508	-	60	46.753	ENSGAFG00000013934	-	98	46.753
ENSGAFG00000018508	-	61	41.772	ENSGAFG00000013053	-	50	43.590
ENSGAFG00000018508	-	65	47.436	ENSGAFG00000013055	-	63	47.436
ENSGAFG00000018508	-	52	48.750	ENSGAFG00000011326	-	98	48.214
ENSGAFG00000018508	-	59	46.341	ENSGAFG00000014413	-	70	46.341
ENSGAFG00000018508	-	66	46.753	ENSGAFG00000003150	-	81	46.753
ENSGAFG00000018508	-	60	44.304	ENSGAFG00000014362	-	62	44.304
ENSGAFG00000018508	-	91	45.455	ENSGAFG00000012977	-	84	45.455
ENSGAFG00000018508	-	53	48.718	ENSGAFG00000013408	-	89	48.718
ENSGAFG00000018508	-	56	46.835	ENSGAFG00000001156	-	66	46.835
ENSGAFG00000018508	-	56	46.753	ENSGAFG00000003108	-	71	43.421
ENSGAFG00000018508	-	60	50.000	ENSGAFG00000018302	-	74	50.000
ENSGAFG00000018508	-	61	38.636	ENSGAFG00000020507	-	58	38.636
ENSGAFG00000018508	-	63	46.154	ENSGAFG00000016587	-	88	46.154
ENSGAFG00000018508	-	63	48.052	ENSGAFG00000012953	-	62	48.052
ENSGAFG00000018508	-	52	44.304	ENSGAFG00000011940	-	73	44.304
ENSGAFG00000018508	-	60	48.101	ENSGAFG00000008231	-	68	48.101
ENSGAFG00000018508	-	60	45.570	ENSGAFG00000000037	-	80	45.570
ENSGAFG00000018508	-	55	49.367	ENSGAFG00000013677	-	88	49.367
ENSGAFG00000018508	-	55	45.570	ENSGAFG00000013491	-	66	45.570
ENSGAFG00000018508	-	51	48.718	ENSGAFG00000012934	-	54	48.718
ENSGAFG00000018508	-	52	41.176	ENSGAFG00000007528	-	56	41.176
ENSGAFG00000018508	-	67	44.872	ENSGAFG00000013969	-	92	49.153
ENSGAFG00000018508	-	59	54.545	ENSGAFG00000001481	-	76	54.545
ENSGAFG00000018508	-	53	49.206	ENSGAFG00000014369	-	98	48.684
ENSGAFG00000018508	-	52	44.304	ENSGAFG00000007110	-	61	44.304
ENSGAFG00000018508	-	66	49.020	ENSGAFG00000014188	-	90	46.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000018508	-	51	44.262	ENSAMEG00000003802	-	86	44.262	Ailuropoda_melanoleuca
ENSGAFG00000018508	-	51	43.636	ENSACIG00000009128	-	71	43.636	Amphilophus_citrinellus
ENSGAFG00000018508	-	61	44.000	ENSACIG00000017050	-	99	46.835	Amphilophus_citrinellus
ENSGAFG00000018508	-	85	45.455	ENSACIG00000003515	-	85	47.436	Amphilophus_citrinellus
ENSGAFG00000018508	-	54	42.667	ENSAPEG00000018271	-	59	42.667	Amphiprion_percula
ENSGAFG00000018508	-	55	49.425	ENSATEG00000011221	-	55	49.425	Anabas_testudineus
ENSGAFG00000018508	-	56	42.308	ENSACLG00000028002	-	81	42.308	Astatotilapia_calliptera
ENSGAFG00000018508	-	62	47.436	ENSACLG00000024308	-	79	50.909	Astatotilapia_calliptera
ENSGAFG00000018508	-	90	57.627	ENSACLG00000003332	-	97	57.627	Astatotilapia_calliptera
ENSGAFG00000018508	-	56	42.466	ENSACLG00000003679	-	78	42.466	Astatotilapia_calliptera
ENSGAFG00000018508	-	64	50.000	ENSACLG00000015816	-	92	50.000	Astatotilapia_calliptera
ENSGAFG00000018508	-	53	35.115	ENSACLG00000017849	-	87	35.115	Astatotilapia_calliptera
ENSGAFG00000018508	-	67	49.333	ENSACLG00000023979	-	85	49.333	Astatotilapia_calliptera
ENSGAFG00000018508	-	78	43.750	ENSACLG00000011237	-	99	46.000	Astatotilapia_calliptera
ENSGAFG00000018508	-	61	50.000	ENSAMXG00000039016	-	87	50.000	Astyanax_mexicanus
ENSGAFG00000018508	-	55	53.571	ENSAMXG00000034402	-	93	53.571	Astyanax_mexicanus
ENSGAFG00000018508	-	61	48.718	ENSAMXG00000036915	-	91	48.718	Astyanax_mexicanus
ENSGAFG00000018508	-	58	46.154	ENSAMXG00000044110	-	86	46.154	Astyanax_mexicanus
ENSGAFG00000018508	-	63	46.154	ENSAMXG00000035875	-	99	46.154	Astyanax_mexicanus
ENSGAFG00000018508	-	55	46.835	ENSAMXG00000037760	-	94	46.835	Astyanax_mexicanus
ENSGAFG00000018508	-	50	48.333	ENSAMXG00000033252	-	89	48.333	Astyanax_mexicanus
ENSGAFG00000018508	-	50	35.849	ENSAMXG00000037382	-	52	43.548	Astyanax_mexicanus
ENSGAFG00000018508	-	60	49.123	ENSAMXG00000035437	-	97	49.123	Astyanax_mexicanus
ENSGAFG00000018508	-	50	45.455	ENSCAFG00000002561	-	61	44.262	Canis_familiaris
ENSGAFG00000018508	-	58	47.170	ENSCPBG00000005586	-	61	47.170	Chrysemys_picta_bellii
ENSGAFG00000018508	-	55	46.667	ENSCSEG00000020696	-	93	49.367	Cynoglossus_semilaevis
ENSGAFG00000018508	-	50	48.052	ENSCSEG00000008539	-	57	48.052	Cynoglossus_semilaevis
ENSGAFG00000018508	-	59	62.887	ENSCSEG00000007055	-	95	70.886	Cynoglossus_semilaevis
ENSGAFG00000018508	-	74	49.367	ENSCSEG00000003757	-	98	49.367	Cynoglossus_semilaevis
ENSGAFG00000018508	-	62	52.459	ENSCVAG00000021107	-	95	50.000	Cyprinodon_variegatus
ENSGAFG00000018508	-	56	38.356	ENSCVAG00000019122	-	97	38.356	Cyprinodon_variegatus
ENSGAFG00000018508	-	51	48.101	ENSCVAG00000022991	-	79	48.101	Cyprinodon_variegatus
ENSGAFG00000018508	-	83	47.561	ENSELUG00000018405	-	96	48.148	Esox_lucius
ENSGAFG00000018508	-	82	48.387	ENSELUG00000019204	-	76	48.387	Esox_lucius
ENSGAFG00000018508	-	70	48.529	ENSELUG00000013094	-	94	50.000	Esox_lucius
ENSGAFG00000018508	-	64	51.316	ENSELUG00000013245	-	80	51.316	Esox_lucius
ENSGAFG00000018508	-	72	46.835	ENSELUG00000017463	-	86	50.000	Esox_lucius
ENSGAFG00000018508	-	59	43.023	ENSFHEG00000016640	-	77	43.023	Fundulus_heteroclitus
ENSGAFG00000018508	-	63	46.774	ENSGACG00000018816	-	99	46.774	Gasterosteus_aculeatus
ENSGAFG00000018508	-	68	48.718	ENSHBUG00000003057	-	89	46.774	Haplochromis_burtoni
ENSGAFG00000018508	-	59	45.570	ENSHBUG00000002961	-	90	45.570	Haplochromis_burtoni
ENSGAFG00000018508	-	65	49.123	ENSHBUG00000013542	-	66	49.123	Haplochromis_burtoni
ENSGAFG00000018508	-	54	44.304	ENSHBUG00000017864	-	88	44.304	Haplochromis_burtoni
ENSGAFG00000018508	-	52	51.282	ENSHCOG00000019497	-	77	50.617	Hippocampus_comes
ENSGAFG00000018508	-	52	48.052	ENSHCOG00000015425	-	74	48.052	Hippocampus_comes
ENSGAFG00000018508	-	67	48.101	ENSHCOG00000001338	-	96	44.872	Hippocampus_comes
ENSGAFG00000018508	-	52	44.444	ENSHCOG00000019001	-	67	44.444	Hippocampus_comes
ENSGAFG00000018508	-	64	49.057	ENSHCOG00000001252	-	97	49.057	Hippocampus_comes
ENSGAFG00000018508	-	51	44.872	ENSHCOG00000008234	-	59	44.872	Hippocampus_comes
ENSGAFG00000018508	-	56	48.101	ENSHCOG00000011411	-	82	48.101	Hippocampus_comes
ENSGAFG00000018508	-	52	51.613	ENSHCOG00000015459	-	63	51.613	Hippocampus_comes
ENSGAFG00000018508	-	50	42.857	ENSIPUG00000005339	-	88	42.857	Ictalurus_punctatus
ENSGAFG00000018508	-	50	49.231	ENSIPUG00000021441	-	79	49.231	Ictalurus_punctatus
ENSGAFG00000018508	-	55	49.333	ENSIPUG00000023635	-	92	49.315	Ictalurus_punctatus
ENSGAFG00000018508	-	58	48.101	ENSIPUG00000016075	-	92	48.101	Ictalurus_punctatus
ENSGAFG00000018508	-	82	43.333	ENSKMAG00000000795	-	91	45.570	Kryptolebias_marmoratus
ENSGAFG00000018508	-	61	42.667	ENSLBEG00000028271	-	74	42.667	Labrus_bergylta
ENSGAFG00000018508	-	56	49.398	ENSLBEG00000024536	-	83	49.398	Labrus_bergylta
ENSGAFG00000018508	-	60	44.156	ENSLBEG00000009580	-	69	44.156	Labrus_bergylta
ENSGAFG00000018508	-	52	44.737	ENSLBEG00000028243	-	74	44.737	Labrus_bergylta
ENSGAFG00000018508	-	64	41.071	ENSMAMG00000022145	-	54	41.071	Mastacembelus_armatus
ENSGAFG00000018508	-	70	45.122	ENSMAMG00000022502	-	90	43.210	Mastacembelus_armatus
ENSGAFG00000018508	-	50	48.052	ENSMZEG00005020462	-	92	48.052	Maylandia_zebra
ENSGAFG00000018508	-	50	46.835	ENSMZEG00005025726	-	86	46.835	Maylandia_zebra
ENSGAFG00000018508	-	80	50.000	ENSMZEG00005015708	-	93	50.000	Maylandia_zebra
ENSGAFG00000018508	-	64	48.000	ENSMMOG00000020560	-	82	48.000	Mola_mola
ENSGAFG00000018508	-	54	40.449	ENSMMOG00000011436	-	50	40.449	Mola_mola
ENSGAFG00000018508	-	54	45.946	ENSMMOG00000007855	-	98	45.946	Mola_mola
ENSGAFG00000018508	-	66	46.154	ENSMALG00000012043	-	95	46.154	Monopterus_albus
ENSGAFG00000018508	-	53	50.649	ENSMALG00000008786	-	80	50.649	Monopterus_albus
ENSGAFG00000018508	-	60	42.466	ENSNBRG00000009811	-	66	42.466	Neolamprologus_brichardi
ENSGAFG00000018508	-	62	48.148	ENSNBRG00000016550	-	90	48.148	Neolamprologus_brichardi
ENSGAFG00000018508	-	59	40.260	ENSNBRG00000001641	-	67	41.667	Neolamprologus_brichardi
ENSGAFG00000018508	-	54	45.333	ENSONIG00000018767	-	99	45.333	Oreochromis_niloticus
ENSGAFG00000018508	-	83	48.684	ENSONIG00000008188	-	94	48.684	Oreochromis_niloticus
ENSGAFG00000018508	-	54	47.619	ENSONIG00000007811	-	99	47.619	Oreochromis_niloticus
ENSGAFG00000018508	-	71	43.137	ENSONIG00000017387	-	88	43.137	Oreochromis_niloticus
ENSGAFG00000018508	-	77	44.156	ENSONIG00000015513	-	98	44.156	Oreochromis_niloticus
ENSGAFG00000018508	-	83	50.649	ENSORLG00015008496	-	97	50.649	Oryzias_latipes_hsok
ENSGAFG00000018508	-	54	40.566	ENSOMEG00000023310	-	73	40.566	Oryzias_melastigma
ENSGAFG00000018508	-	70	50.000	ENSPKIG00000012069	-	97	48.333	Paramormyrops_kingsleyae
ENSGAFG00000018508	-	55	49.091	ENSPSIG00000000760	-	72	49.091	Pelodiscus_sinensis
ENSGAFG00000018508	-	55	47.059	ENSPSIG00000005128	-	100	47.059	Pelodiscus_sinensis
ENSGAFG00000018508	-	51	48.000	ENSPMGG00000011473	-	84	48.000	Periophthalmus_magnuspinnatus
ENSGAFG00000018508	-	65	36.129	ENSPMGG00000014788	-	58	36.129	Periophthalmus_magnuspinnatus
ENSGAFG00000018508	-	53	45.570	ENSPMGG00000006845	-	59	45.570	Periophthalmus_magnuspinnatus
ENSGAFG00000018508	-	66	41.772	ENSPMGG00000001543	-	92	41.772	Periophthalmus_magnuspinnatus
ENSGAFG00000018508	-	74	47.436	ENSPMGG00000018639	-	97	47.436	Periophthalmus_magnuspinnatus
ENSGAFG00000018508	-	57	50.633	ENSPMGG00000010453	-	88	51.220	Periophthalmus_magnuspinnatus
ENSGAFG00000018508	-	57	48.101	ENSPFOG00000024470	-	71	48.101	Poecilia_formosa
ENSGAFG00000018508	-	96	43.590	ENSPFOG00000017913	-	63	48.000	Poecilia_formosa
ENSGAFG00000018508	-	50	48.214	ENSPFOG00000007919	-	100	48.214	Poecilia_formosa
ENSGAFG00000018508	-	52	46.835	ENSPFOG00000001339	-	82	46.835	Poecilia_formosa
ENSGAFG00000018508	-	61	46.753	ENSPLAG00000006828	-	97	46.753	Poecilia_latipinna
ENSGAFG00000018508	-	62	50.000	ENSPMEG00000010618	-	78	50.000	Poecilia_mexicana
ENSGAFG00000018508	-	59	41.026	ENSPMEG00000014688	-	58	41.026	Poecilia_mexicana
ENSGAFG00000018508	-	53	48.101	ENSPMEG00000023808	-	89	48.101	Poecilia_mexicana
ENSGAFG00000018508	-	55	42.647	ENSPMEG00000015345	-	82	42.647	Poecilia_mexicana
ENSGAFG00000018508	-	60	49.091	ENSPREG00000019161	-	87	49.091	Poecilia_reticulata
ENSGAFG00000018508	-	88	87.079	ENSPREG00000021116	-	51	87.079	Poecilia_reticulata
ENSGAFG00000018508	-	56	51.515	ENSPREG00000020014	-	92	51.515	Poecilia_reticulata
ENSGAFG00000018508	-	56	42.466	ENSPNYG00000012188	-	78	42.466	Pundamilia_nyererei
ENSGAFG00000018508	-	62	46.835	ENSPNYG00000018372	-	62	46.835	Pundamilia_nyererei
ENSGAFG00000018508	-	90	47.126	ENSPNAG00000003702	-	85	47.126	Pygocentrus_nattereri
ENSGAFG00000018508	-	59	41.250	ENSPNAG00000011679	-	57	41.250	Pygocentrus_nattereri
ENSGAFG00000018508	-	75	44.156	ENSXETG00000027149	-	98	44.156	Xenopus_tropicalis
ENSGAFG00000018508	-	52	45.455	ENSXCOG00000007957	-	76	47.436	Xiphophorus_couchianus
ENSGAFG00000018508	-	66	36.364	ENSXMAG00000027437	-	69	36.364	Xiphophorus_maculatus
ENSGAFG00000018508	-	52	45.333	ENSXMAG00000020039	-	91	43.421	Xiphophorus_maculatus
ENSGAFG00000018508	-	57	50.820	ENSXMAG00000027906	-	69	50.000	Xiphophorus_maculatus
ENSGAFG00000018508	-	53	44.304	ENSXMAG00000024641	-	89	46.835	Xiphophorus_maculatus
ENSGAFG00000018508	-	55	44.872	ENSXMAG00000025344	-	78	44.872	Xiphophorus_maculatus
ENSGAFG00000018508	-	60	50.000	ENSXMAG00000026477	-	72	50.000	Xiphophorus_maculatus
ENSGAFG00000018508	-	61	46.753	ENSXMAG00000026679	-	98	45.570	Xiphophorus_maculatus