EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000018557 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 18844 bases
Position: chrNHOQ01000682.1:9066723-9085566
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000027463	zf-C2H2	PF00096.26	3.1e-35	1	7
ENSGAFP00000027463	zf-C2H2	PF00096.26	3.1e-35	2	7
ENSGAFP00000027463	zf-C2H2	PF00096.26	3.1e-35	3	7
ENSGAFP00000027463	zf-C2H2	PF00096.26	3.1e-35	4	7
ENSGAFP00000027463	zf-C2H2	PF00096.26	3.1e-35	5	7
ENSGAFP00000027463	zf-C2H2	PF00096.26	3.1e-35	6	7
ENSGAFP00000027463	zf-C2H2	PF00096.26	3.1e-35	7	7
ENSGAFP00000027463	zf-met	PF12874.7	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000027746	-	4921	-	ENSGAFP00000027463	706 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000018557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000018557's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000018557	-	50	44.681	ENSGAFG00000007098	-	96	44.681
ENSGAFG00000018557	-	62	39.568	ENSGAFG00000011938	-	69	39.568
ENSGAFG00000018557	-	50	38.164	ENSGAFG00000000266	-	76	38.164
ENSGAFG00000018557	-	51	38.408	ENSGAFG00000013408	-	98	38.408
ENSGAFG00000018557	-	52	40.824	ENSGAFG00000014188	-	96	40.824
ENSGAFG00000018557	-	52	39.565	ENSGAFG00000013616	-	77	39.565
ENSGAFG00000018557	-	51	40.773	ENSGAFG00000013452	-	77	40.773
ENSGAFG00000018557	-	53	38.605	ENSGAFG00000021132	-	64	39.189
ENSGAFG00000018557	-	52	41.404	ENSGAFG00000021131	-	97	41.991
ENSGAFG00000018557	-	59	38.222	ENSGAFG00000013006	-	75	38.197
ENSGAFG00000018557	-	61	30.769	ENSGAFG00000013066	-	92	31.762
ENSGAFG00000018557	-	50	41.869	ENSGAFG00000011884	-	97	41.754
ENSGAFG00000018557	-	63	41.634	ENSGAFG00000018820	-	61	41.634
ENSGAFG00000018557	-	59	38.500	ENSGAFG00000012733	-	73	38.500
ENSGAFG00000018557	-	50	40.086	ENSGAFG00000013396	-	75	40.086
ENSGAFG00000018557	-	50	30.241	ENSGAFG00000008457	zbtb41	53	37.500
ENSGAFG00000018557	-	50	43.103	ENSGAFG00000011326	-	98	44.211
ENSGAFG00000018557	-	51	35.932	ENSGAFG00000012987	-	88	37.722
ENSGAFG00000018557	-	50	41.754	ENSGAFG00000013363	-	69	41.754
ENSGAFG00000018557	-	52	37.452	ENSGAFG00000018340	-	53	37.452
ENSGAFG00000018557	-	50	39.326	ENSGAFG00000013969	-	94	39.524
ENSGAFG00000018557	-	56	36.190	ENSGAFG00000008231	-	80	40.071
ENSGAFG00000018557	-	54	39.423	ENSGAFG00000019072	-	90	40.840
ENSGAFG00000018557	-	52	41.284	ENSGAFG00000004319	-	57	41.284
ENSGAFG00000018557	-	52	41.991	ENSGAFG00000013934	-	99	41.991
ENSGAFG00000018557	-	55	40.000	ENSGAFG00000008274	-	97	42.657
ENSGAFG00000018557	-	54	30.709	ENSGAFG00000003108	-	88	30.495

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000018557	-	98	36.828	ENSG00000175213	ZNF408	92	36.828	Homo_sapiens
ENSGAFG00000018557	-	59	46.539	ENSAMEG00000006904	ZNF408	93	35.302	Ailuropoda_melanoleuca
ENSGAFG00000018557	-	59	47.494	ENSANAG00000036294	ZNF408	57	47.494	Aotus_nancymaae
ENSGAFG00000018557	-	98	37.284	ENSAMXG00000032642	znf408	98	37.796	Astyanax_mexicanus
ENSGAFG00000018557	-	81	39.737	ENSCJAG00000019859	ZNF408	93	36.228	Callithrix_jacchus
ENSGAFG00000018557	-	58	45.610	ENSCHIG00000025346	ZNF408	59	45.610	Capra_hircus
ENSGAFG00000018557	-	81	39.434	ENSTSYG00000025443	ZNF408	93	35.802	Carlito_syrichta
ENSGAFG00000018557	-	99	36.190	ENSCCAG00000029472	ZNF408	94	36.871	Cebus_capucinus
ENSGAFG00000018557	-	80	38.538	ENSCGRG00001023588	Zfp408	80	38.704	Cricetulus_griseus_chok1gshd
ENSGAFG00000018557	-	80	38.538	ENSCGRG00000017618	Zfp408	80	38.704	Cricetulus_griseus_crigri
ENSGAFG00000018557	-	82	38.636	ENSDNOG00000047669	ZNF408	82	39.222	Dasypus_novemcinctus
ENSGAFG00000018557	-	82	40.068	ENSDORG00000000387	Zfp408	90	37.482	Dipodomys_ordii
ENSGAFG00000018557	-	59	45.215	ENSEASG00005015461	ZNF408	54	45.215	Equus_asinus_asinus
ENSGAFG00000018557	-	59	45.346	ENSECAG00000010878	ZNF408	55	45.346	Equus_caballus
ENSGAFG00000018557	-	58	44.878	ENSEEUG00000010466	ZNF408	54	44.418	Erinaceus_europaeus
ENSGAFG00000018557	-	81	38.080	ENSFCAG00000029105	ZNF408	93	34.853	Felis_catus
ENSGAFG00000018557	-	100	66.624	ENSFHEG00000016754	-	100	66.496	Fundulus_heteroclitus
ENSGAFG00000018557	-	98	36.966	ENSGGOG00000010152	ZNF408	92	36.828	Gorilla_gorilla
ENSGAFG00000018557	-	81	39.222	ENSMICG00000045320	ZNF408	93	35.801	Microcebus_murinus
ENSGAFG00000018557	-	59	46.301	ENSMPUG00000005490	ZNF408	94	35.618	Mustela_putorius_furo
ENSGAFG00000018557	-	82	39.384	ENSNGAG00000000309	Zfp408	95	36.878	Nannospalax_galili
ENSGAFG00000018557	-	99	35.984	ENSNLEG00000014132	ZNF408	93	35.714	Nomascus_leucogenys
ENSGAFG00000018557	-	83	40.224	ENSOCUG00000010953	ZNF408	94	36.562	Oryctolagus_cuniculus
ENSGAFG00000018557	-	70	43.400	ENSOGAG00000034080	ZNF408	73	43.400	Otolemur_garnettii
ENSGAFG00000018557	-	98	36.828	ENSPPAG00000034993	ZNF408	92	36.828	Pan_paniscus
ENSGAFG00000018557	-	81	37.898	ENSPPRG00000016866	ZNF408	93	34.492	Panthera_pardus
ENSGAFG00000018557	-	81	37.599	ENSPTIG00000015467	ZNF408	94	34.748	Panthera_tigris_altaica
ENSGAFG00000018557	-	98	36.828	ENSPTRG00000003551	ZNF408	92	36.828	Pan_troglodytes
ENSGAFG00000018557	-	100	89.577	ENSPFOG00000001760	-	100	89.577	Poecilia_formosa
ENSGAFG00000018557	-	80	89.633	ENSPLAG00000019895	-	100	89.633	Poecilia_latipinna
ENSGAFG00000018557	-	78	83.696	ENSPMEG00000021147	-	98	83.696	Poecilia_mexicana
ENSGAFG00000018557	-	100	91.268	ENSPREG00000017068	-	100	91.268	Poecilia_reticulata
ENSGAFG00000018557	-	99	36.240	ENSPPYG00000003318	ZNF408	93	36.289	Pongo_abelii
ENSGAFG00000018557	-	81	38.916	ENSPCAG00000014001	ZNF408	94	35.918	Procavia_capensis
ENSGAFG00000018557	-	81	38.399	ENSPCOG00000028698	ZNF408	93	35.628	Propithecus_coquereli
ENSGAFG00000018557	-	98	35.049	ENSPVAG00000015791	ZNF408	92	35.049	Pteropus_vampyrus
ENSGAFG00000018557	-	99	35.744	ENSSBOG00000033023	ZNF408	93	36.153	Saimiri_boliviensis_boliviensis
ENSGAFG00000018557	-	58	46.585	ENSSSCG00000023097	ZNF408	91	35.453	Sus_scrofa
ENSGAFG00000018557	-	59	46.539	ENSUAMG00000026154	ZNF408	93	35.215	Ursus_americanus
ENSGAFG00000018557	-	59	46.539	ENSUMAG00000014405	ZNF408	93	35.081	Ursus_maritimus
ENSGAFG00000018557	-	99	34.806	ENSVVUG00000026805	ZNF408	50	47.073	Vulpes_vulpes
ENSGAFG00000018557	-	58	42.518	ENSXETG00000001980	znf408	99	42.518	Xenopus_tropicalis
ENSGAFG00000018557	-	82	88.158	ENSXCOG00000002869	-	100	88.158	Xiphophorus_couchianus
ENSGAFG00000018557	-	80	88.000	ENSXMAG00000018347	-	100	88.000	Xiphophorus_maculatus