EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000019000 (Gene tree)
Gene ID: -
Gene Symbol: smg7
Alias: fa99h10|wu:fa99h10
Full Name: SMG7 nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 13565 bases
Position: chrNHOQ01000310.1:50269-63833
Accession: ZDB-GENE-030131-9122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000028098	EST1	PF10374.9	6.9e-24	1	1
ENSGAFP00000028101	EST1	PF10374.9	3.3e-20	1	1
ENSGAFP00000028098	EST1_DNA_bind	PF10373.9	4.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000028386	-	5767	-	ENSGAFP00000028098	1135 (aa)	-	-
ENSGAFT00000028389	-	825	-	ENSGAFP00000028101	274 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019000's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019000	smg7	99	64.397	ENSG00000116698	SMG7	94	85.876	Homo_sapiens
ENSGAFG00000019000	smg7	89	87.389	ENSAPOG00000009611	smg7	96	87.389	Acanthochromis_polyacanthus
ENSGAFG00000019000	smg7	99	64.131	ENSAMEG00000002357	SMG7	99	63.879	Ailuropoda_melanoleuca
ENSGAFG00000019000	smg7	97	79.550	ENSACIG00000015152	smg7	100	80.198	Amphilophus_citrinellus
ENSGAFG00000019000	smg7	100	83.088	ENSAOCG00000013538	smg7	100	83.969	Amphiprion_ocellaris
ENSGAFG00000019000	smg7	100	83.102	ENSAPEG00000007851	smg7	100	83.983	Amphiprion_percula
ENSGAFG00000019000	smg7	100	82.526	ENSATEG00000006931	smg7	100	82.785	Anabas_testudineus
ENSGAFG00000019000	smg7	99	62.723	ENSAPLG00000015811	SMG7	99	63.832	Anas_platyrhynchos
ENSGAFG00000019000	smg7	99	61.799	ENSACAG00000014989	SMG7	99	61.545	Anolis_carolinensis
ENSGAFG00000019000	smg7	99	64.372	ENSANAG00000028114	SMG7	95	85.475	Aotus_nancymaae
ENSGAFG00000019000	smg7	100	81.661	ENSACLG00000022079	smg7	100	81.739	Astatotilapia_calliptera
ENSGAFG00000019000	smg7	100	73.583	ENSAMXG00000020809	smg7	100	74.129	Astyanax_mexicanus
ENSGAFG00000019000	smg7	99	63.567	ENSBTAG00000008003	SMG7	99	64.322	Bos_taurus
ENSGAFG00000019000	smg7	99	64.286	ENSCJAG00000005135	SMG7	98	84.153	Callithrix_jacchus
ENSGAFG00000019000	smg7	99	60.282	ENSCAFG00000013276	SMG7	97	60.298	Canis_familiaris
ENSGAFG00000019000	smg7	99	63.863	ENSCAFG00020015475	SMG7	97	84.066	Canis_lupus_dingo
ENSGAFG00000019000	smg7	100	60.413	ENSCHIG00000018192	SMG7	99	60.579	Capra_hircus
ENSGAFG00000019000	smg7	99	63.863	ENSTSYG00000002667	SMG7	92	84.066	Carlito_syrichta
ENSGAFG00000019000	smg7	99	60.614	ENSCPOG00000008906	SMG7	99	60.017	Cavia_porcellus
ENSGAFG00000019000	smg7	99	64.544	ENSCCAG00000028596	SMG7	95	85.475	Cebus_capucinus
ENSGAFG00000019000	smg7	99	64.655	ENSCATG00000011063	SMG7	95	85.475	Cercocebus_atys
ENSGAFG00000019000	smg7	99	64.580	ENSCLAG00000010751	SMG7	99	64.666	Chinchilla_lanigera
ENSGAFG00000019000	smg7	99	60.349	ENSCSAG00000012654	SMG7	97	60.848	Chlorocebus_sabaeus
ENSGAFG00000019000	smg7	92	55.845	ENSCHOG00000010522	SMG7	93	56.143	Choloepus_hoffmanni
ENSGAFG00000019000	smg7	99	65.030	ENSCPBG00000015724	SMG7	99	64.948	Chrysemys_picta_bellii
ENSGAFG00000019000	smg7	56	51.250	ENSCING00000006953	-	99	52.174	Ciona_intestinalis
ENSGAFG00000019000	smg7	99	64.533	ENSCANG00000015680	SMG7	95	85.475	Colobus_angolensis_palliatus
ENSGAFG00000019000	smg7	99	63.722	ENSCGRG00001013705	Smg7	99	63.894	Cricetulus_griseus_chok1gshd
ENSGAFG00000019000	smg7	99	63.566	ENSCGRG00000018401	Smg7	100	63.738	Cricetulus_griseus_crigri
ENSGAFG00000019000	smg7	58	89.634	ENSCSEG00000007392	-	92	89.634	Cynoglossus_semilaevis
ENSGAFG00000019000	smg7	99	86.131	ENSCVAG00000011842	smg7	100	86.219	Cyprinodon_variegatus
ENSGAFG00000019000	smg7	100	73.588	ENSDARG00000060767	smg7	100	73.762	Danio_rerio
ENSGAFG00000019000	smg7	99	60.515	ENSDORG00000007331	Smg7	99	61.014	Dipodomys_ordii
ENSGAFG00000019000	smg7	96	59.177	ENSETEG00000002654	SMG7	99	59.777	Echinops_telfairi
ENSGAFG00000019000	smg7	99	60.931	ENSEASG00005006524	SMG7	99	61.347	Equus_asinus_asinus
ENSGAFG00000019000	smg7	99	62.835	ENSECAG00000004313	SMG7	99	61.430	Equus_caballus
ENSGAFG00000019000	smg7	96	59.107	ENSEEUG00000002024	SMG7	94	59.212	Erinaceus_europaeus
ENSGAFG00000019000	smg7	100	71.122	ENSELUG00000010293	smg7	99	73.956	Esox_lucius
ENSGAFG00000019000	smg7	99	62.941	ENSFCAG00000010900	SMG7	99	62.284	Felis_catus
ENSGAFG00000019000	smg7	99	60.135	ENSFALG00000003047	SMG7	100	60.892	Ficedula_albicollis
ENSGAFG00000019000	smg7	99	60.750	ENSFDAG00000012121	SMG7	99	60.639	Fukomys_damarensis
ENSGAFG00000019000	smg7	100	87.927	ENSFHEG00000011073	smg7	100	87.927	Fundulus_heteroclitus
ENSGAFG00000019000	smg7	88	79.550	ENSGMOG00000004916	smg7	91	79.550	Gadus_morhua
ENSGAFG00000019000	smg7	99	62.799	ENSGALG00000004667	SMG7	99	64.524	Gallus_gallus
ENSGAFG00000019000	smg7	98	79.234	ENSGACG00000001634	smg7	99	79.304	Gasterosteus_aculeatus
ENSGAFG00000019000	smg7	56	91.558	ENSGAGG00000024208	-	84	89.308	Gopherus_agassizii
ENSGAFG00000019000	smg7	99	64.397	ENSGGOG00000002342	SMG7	90	85.475	Gorilla_gorilla
ENSGAFG00000019000	smg7	98	80.868	ENSHBUG00000003726	smg7	99	80.622	Haplochromis_burtoni
ENSGAFG00000019000	smg7	99	64.741	ENSHGLG00000009353	SMG7	99	64.914	Heterocephalus_glaber_female
ENSGAFG00000019000	smg7	99	55.333	ENSHGLG00100004878	-	99	55.278	Heterocephalus_glaber_male
ENSGAFG00000019000	smg7	99	64.655	ENSHGLG00100009637	-	99	64.828	Heterocephalus_glaber_male
ENSGAFG00000019000	smg7	60	88.485	ENSHCOG00000012804	-	88	89.024	Hippocampus_comes
ENSGAFG00000019000	smg7	100	74.366	ENSIPUG00000016997	smg7	100	74.366	Ictalurus_punctatus
ENSGAFG00000019000	smg7	99	63.085	ENSSTOG00000000401	SMG7	99	63.172	Ictidomys_tridecemlineatus
ENSGAFG00000019000	smg7	99	60.830	ENSJJAG00000012351	Smg7	99	60.913	Jaculus_jaculus
ENSGAFG00000019000	smg7	64	73.446	ENSJJAG00000000309	-	98	73.446	Jaculus_jaculus
ENSGAFG00000019000	smg7	97	79.821	ENSKMAG00000004900	smg7	100	79.946	Kryptolebias_marmoratus
ENSGAFG00000019000	smg7	64	62.415	ENSLBEG00000005220	-	75	73.913	Labrus_bergylta
ENSGAFG00000019000	smg7	99	80.977	ENSLBEG00000002983	smg7	99	80.803	Labrus_bergylta
ENSGAFG00000019000	smg7	100	65.140	ENSLACG00000000972	SMG7	99	65.812	Latimeria_chalumnae
ENSGAFG00000019000	smg7	99	65.489	ENSLOCG00000002010	smg7	99	64.996	Lepisosteus_oculatus
ENSGAFG00000019000	smg7	99	60.050	ENSLAFG00000008186	SMG7	99	60.368	Loxodonta_africana
ENSGAFG00000019000	smg7	99	62.921	ENSMFAG00000031653	SMG7	95	85.475	Macaca_fascicularis
ENSGAFG00000019000	smg7	99	63.699	ENSMMUG00000018458	SMG7	99	63.872	Macaca_mulatta
ENSGAFG00000019000	smg7	99	64.655	ENSMNEG00000034798	SMG7	95	85.475	Macaca_nemestrina
ENSGAFG00000019000	smg7	99	64.655	ENSMLEG00000037170	SMG7	99	64.828	Mandrillus_leucophaeus
ENSGAFG00000019000	smg7	88	79.447	ENSMAMG00000018733	smg7	85	80.020	Mastacembelus_armatus
ENSGAFG00000019000	smg7	100	81.960	ENSMZEG00005015247	smg7	100	80.969	Maylandia_zebra
ENSGAFG00000019000	smg7	99	62.199	ENSMGAG00000001561	SMG7	99	63.934	Meleagris_gallopavo
ENSGAFG00000019000	smg7	99	63.839	ENSMAUG00000019484	Smg7	99	63.801	Mesocricetus_auratus
ENSGAFG00000019000	smg7	99	64.569	ENSMICG00000007145	SMG7	91	85.475	Microcebus_murinus
ENSGAFG00000019000	smg7	99	63.582	ENSMOCG00000020748	Smg7	99	63.668	Microtus_ochrogaster
ENSGAFG00000019000	smg7	99	78.253	ENSMMOG00000001524	smg7	99	78.690	Mola_mola
ENSGAFG00000019000	smg7	92	64.492	ENSMODG00000007139	SMG7	99	64.585	Monodelphis_domestica
ENSGAFG00000019000	smg7	100	81.794	ENSMALG00000000061	smg7	93	82.143	Monopterus_albus
ENSGAFG00000019000	smg7	99	63.918	MGP_CAROLIEiJ_G0014704	Smg7	99	64.003	Mus_caroli
ENSGAFG00000019000	smg7	99	63.832	ENSMUSG00000042772	Smg7	99	64.003	Mus_musculus
ENSGAFG00000019000	smg7	99	64.003	MGP_PahariEiJ_G0027940	Smg7	99	64.175	Mus_pahari
ENSGAFG00000019000	smg7	99	63.918	MGP_SPRETEiJ_G0015511	Smg7	99	64.089	Mus_spretus
ENSGAFG00000019000	smg7	98	59.949	ENSMPUG00000011732	SMG7	97	59.966	Mustela_putorius_furo
ENSGAFG00000019000	smg7	99	60.067	ENSMLUG00000015417	SMG7	99	60.483	Myotis_lucifugus
ENSGAFG00000019000	smg7	100	63.419	ENSNGAG00000009836	Smg7	100	63.404	Nannospalax_galili
ENSGAFG00000019000	smg7	98	75.351	ENSNBRG00000024343	smg7	99	75.618	Neolamprologus_brichardi
ENSGAFG00000019000	smg7	99	64.569	ENSNLEG00000018018	SMG7	99	64.741	Nomascus_leucogenys
ENSGAFG00000019000	smg7	64	100.000	ENSMEUG00000004681	SMG7	68	100.000	Notamacropus_eugenii
ENSGAFG00000019000	smg7	96	57.899	ENSOPRG00000013942	SMG7	96	58.129	Ochotona_princeps
ENSGAFG00000019000	smg7	99	63.853	ENSODEG00000010390	SMG7	99	64.439	Octodon_degus
ENSGAFG00000019000	smg7	100	82.093	ENSONIG00000000277	smg7	100	82.087	Oreochromis_niloticus
ENSGAFG00000019000	smg7	99	60.807	ENSOANG00000000994	SMG7	100	60.807	Ornithorhynchus_anatinus
ENSGAFG00000019000	smg7	99	58.784	ENSOCUG00000005887	SMG7	93	58.906	Oryctolagus_cuniculus
ENSGAFG00000019000	smg7	100	78.984	ENSORLG00000007314	smg7	100	79.772	Oryzias_latipes
ENSGAFG00000019000	smg7	100	79.072	ENSORLG00020015779	smg7	100	79.860	Oryzias_latipes_hni
ENSGAFG00000019000	smg7	100	79.422	ENSORLG00015012289	smg7	100	79.772	Oryzias_latipes_hsok
ENSGAFG00000019000	smg7	100	76.490	ENSOMEG00000002328	smg7	100	76.826	Oryzias_melastigma
ENSGAFG00000019000	smg7	96	59.538	ENSOGAG00000003107	SMG7	93	59.503	Otolemur_garnettii
ENSGAFG00000019000	smg7	99	62.860	ENSOARG00000001352	SMG7	100	63.034	Ovis_aries
ENSGAFG00000019000	smg7	99	64.569	ENSPPAG00000031619	SMG7	95	85.475	Pan_paniscus
ENSGAFG00000019000	smg7	99	64.666	ENSPPRG00000011222	SMG7	99	64.328	Panthera_pardus
ENSGAFG00000019000	smg7	96	61.263	ENSPTIG00000007242	SMG7	100	61.191	Panthera_tigris_altaica
ENSGAFG00000019000	smg7	99	64.569	ENSPTRG00000001764	SMG7	95	85.475	Pan_troglodytes
ENSGAFG00000019000	smg7	99	64.655	ENSPANG00000004520	SMG7	99	64.828	Papio_anubis
ENSGAFG00000019000	smg7	99	67.722	ENSPKIG00000007242	smg7	99	67.572	Paramormyrops_kingsleyae
ENSGAFG00000019000	smg7	99	64.553	ENSPSIG00000012201	SMG7	100	64.466	Pelodiscus_sinensis
ENSGAFG00000019000	smg7	71	48.441	ENSPMGG00000021833	smg7	97	48.561	Periophthalmus_magnuspinnatus
ENSGAFG00000019000	smg7	58	86.875	ENSPMGG00000002179	-	94	81.871	Periophthalmus_magnuspinnatus
ENSGAFG00000019000	smg7	99	63.322	ENSPEMG00000011315	Smg7	99	63.495	Peromyscus_maniculatus_bairdii
ENSGAFG00000019000	smg7	99	64.721	ENSPCIG00000003786	SMG7	89	90.683	Phascolarctos_cinereus
ENSGAFG00000019000	smg7	100	93.608	ENSPFOG00000019219	smg7	100	93.608	Poecilia_formosa
ENSGAFG00000019000	smg7	100	97.805	ENSPLAG00000001446	smg7	100	97.805	Poecilia_latipinna
ENSGAFG00000019000	smg7	97	97.731	ENSPMEG00000005218	smg7	99	97.731	Poecilia_mexicana
ENSGAFG00000019000	smg7	87	93.145	ENSPREG00000019039	smg7	91	93.548	Poecilia_reticulata
ENSGAFG00000019000	smg7	99	64.569	ENSPPYG00000000427	SMG7	99	64.741	Pongo_abelii
ENSGAFG00000019000	smg7	89	69.717	ENSPCAG00000008360	SMG7	88	69.717	Procavia_capensis
ENSGAFG00000019000	smg7	99	63.258	ENSPCOG00000011996	SMG7	87	83.978	Propithecus_coquereli
ENSGAFG00000019000	smg7	91	56.767	ENSPVAG00000000851	SMG7	89	56.857	Pteropus_vampyrus
ENSGAFG00000019000	smg7	100	81.873	ENSPNYG00000007643	smg7	100	81.953	Pundamilia_nyererei
ENSGAFG00000019000	smg7	100	73.917	ENSPNAG00000011374	smg7	100	74.263	Pygocentrus_nattereri
ENSGAFG00000019000	smg7	99	63.706	ENSRNOG00000027962	Smg7	99	65.019	Rattus_norvegicus
ENSGAFG00000019000	smg7	99	64.569	ENSRBIG00000036316	SMG7	99	64.741	Rhinopithecus_bieti
ENSGAFG00000019000	smg7	99	64.569	ENSRROG00000035719	SMG7	99	64.741	Rhinopithecus_roxellana
ENSGAFG00000019000	smg7	99	62.889	ENSSBOG00000023454	SMG7	94	85.876	Saimiri_boliviensis_boliviensis
ENSGAFG00000019000	smg7	99	63.941	ENSSHAG00000013147	SMG7	99	64.433	Sarcophilus_harrisii
ENSGAFG00000019000	smg7	100	70.409	ENSSFOG00015017252	smg7	100	70.670	Scleropages_formosus
ENSGAFG00000019000	smg7	100	80.349	ENSSMAG00000006067	smg7	100	81.239	Scophthalmus_maximus
ENSGAFG00000019000	smg7	59	93.789	ENSSDUG00000017543	smg7	100	82.845	Seriola_dumerili
ENSGAFG00000019000	smg7	58	92.500	ENSSLDG00000003750	-	96	95.652	Seriola_lalandi_dorsalis
ENSGAFG00000019000	smg7	99	64.286	ENSSPUG00000002064	SMG7	99	64.120	Sphenodon_punctatus
ENSGAFG00000019000	smg7	99	81.135	ENSSPAG00000008733	smg7	99	81.485	Stegastes_partitus
ENSGAFG00000019000	smg7	99	63.172	ENSSSCG00000015558	SMG7	99	63.345	Sus_scrofa
ENSGAFG00000019000	smg7	99	63.140	ENSTGUG00000003928	SMG7	100	64.655	Taeniopygia_guttata
ENSGAFG00000019000	smg7	58	90.244	ENSTRUG00000003612	-	90	90.244	Takifugu_rubripes
ENSGAFG00000019000	smg7	100	69.540	ENSTNIG00000002802	smg7	100	69.130	Tetraodon_nigroviridis
ENSGAFG00000019000	smg7	78	65.341	ENSTBEG00000003220	SMG7	72	65.341	Tupaia_belangeri
ENSGAFG00000019000	smg7	96	59.725	ENSTTRG00000014778	SMG7	94	60.155	Tursiops_truncatus
ENSGAFG00000019000	smg7	96	61.773	ENSUAMG00000017473	SMG7	100	61.786	Ursus_americanus
ENSGAFG00000019000	smg7	96	61.773	ENSUMAG00000016389	SMG7	100	61.786	Ursus_maritimus
ENSGAFG00000019000	smg7	99	62.998	ENSVVUG00000008976	SMG7	99	62.748	Vulpes_vulpes
ENSGAFG00000019000	smg7	99	59.645	ENSXETG00000012528	smg7	99	59.746	Xenopus_tropicalis
ENSGAFG00000019000	smg7	100	97.276	ENSXMAG00000007123	smg7	100	97.276	Xiphophorus_maculatus