EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000019035 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 6622 bases
Position: chrNHOQ01000205.1:76522-83143
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000028145	zf-C2H2	PF00096.26	6.2e-24	1	5
ENSGAFP00000028145	zf-C2H2	PF00096.26	6.2e-24	2	5
ENSGAFP00000028145	zf-C2H2	PF00096.26	6.2e-24	3	5
ENSGAFP00000028145	zf-C2H2	PF00096.26	6.2e-24	4	5
ENSGAFP00000028145	zf-C2H2	PF00096.26	6.2e-24	5	5
ENSGAFP00000028145	zf-met	PF12874.7	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000028434	-	3906	-	ENSGAFP00000028145	524 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000019035	-	66	49.254	ENSGAFG00000011998	-	90	49.254
ENSGAFG00000019035	-	80	47.561	ENSGAFG00000011999	-	81	52.222
ENSGAFG00000019035	-	50	50.898	ENSGAFG00000019072	-	93	46.114
ENSGAFG00000019035	-	50	47.500	ENSGAFG00000011913	si:ch211-161m3.4	97	47.500
ENSGAFG00000019035	-	69	50.794	ENSGAFG00000018302	-	97	50.794
ENSGAFG00000019035	-	96	43.939	ENSGAFG00000004319	-	98	43.939
ENSGAFG00000019035	-	64	50.909	ENSGAFG00000012035	-	94	48.691
ENSGAFG00000019035	-	81	47.644	ENSGAFG00000013934	-	97	51.031
ENSGAFG00000019035	-	93	51.832	ENSGAFG00000007104	-	98	51.832
ENSGAFG00000019035	-	58	41.887	ENSGAFG00000016595	-	94	48.551
ENSGAFG00000019035	-	69	52.326	ENSGAFG00000013363	-	97	52.326
ENSGAFG00000019035	-	73	48.201	ENSGAFG00000012004	-	95	48.201
ENSGAFG00000019035	-	96	47.977	ENSGAFG00000008204	-	97	47.953
ENSGAFG00000019035	-	50	51.977	ENSGAFG00000012069	-	98	50.000
ENSGAFG00000019035	-	96	42.328	ENSGAFG00000010983	-	99	40.291
ENSGAFG00000019035	-	73	47.899	ENSGAFG00000013366	-	81	47.899
ENSGAFG00000019035	-	98	47.701	ENSGAFG00000008226	-	99	47.701
ENSGAFG00000019035	-	56	42.683	ENSGAFG00000000549	-	68	42.683
ENSGAFG00000019035	-	86	53.061	ENSGAFG00000011906	-	92	53.061
ENSGAFG00000019035	-	56	42.408	ENSGAFG00000012987	-	97	42.408
ENSGAFG00000019035	-	69	51.309	ENSGAFG00000007098	-	96	51.309
ENSGAFG00000019035	-	90	46.277	ENSGAFG00000007110	-	99	46.277
ENSGAFG00000019035	-	83	50.785	ENSGAFG00000018645	-	97	47.980
ENSGAFG00000019035	-	90	50.898	ENSGAFG00000016976	-	100	50.898
ENSGAFG00000019035	-	96	46.842	ENSGAFG00000008231	-	99	46.842
ENSGAFG00000019035	-	59	47.449	ENSGAFG00000001156	-	75	47.449
ENSGAFG00000019035	-	76	48.673	ENSGAFG00000012054	-	80	51.429
ENSGAFG00000019035	-	51	45.693	ENSGAFG00000011965	-	77	56.250
ENSGAFG00000019035	-	87	41.837	ENSGAFG00000011884	-	98	52.356
ENSGAFG00000019035	-	96	46.561	ENSGAFG00000008274	-	97	49.735
ENSGAFG00000019035	-	64	40.553	ENSGAFG00000013420	-	89	42.105
ENSGAFG00000019035	-	76	45.783	ENSGAFG00000018422	-	95	45.783
ENSGAFG00000019035	-	75	43.678	ENSGAFG00000017066	-	91	44.595
ENSGAFG00000019035	-	96	50.262	ENSGAFG00000011326	-	99	50.262
ENSGAFG00000019035	-	66	46.746	ENSGAFG00000011938	-	96	46.746
ENSGAFG00000019035	-	86	47.895	ENSGAFG00000013677	-	99	50.000
ENSGAFG00000019035	-	82	48.276	ENSGAFG00000020499	-	91	48.421
ENSGAFG00000019035	-	71	48.092	ENSGAFG00000020507	-	97	48.092
ENSGAFG00000019035	-	64	47.644	ENSGAFG00000011940	-	99	47.895
ENSGAFG00000019035	-	64	46.842	ENSGAFG00000013616	-	90	46.842
ENSGAFG00000019035	-	84	52.239	ENSGAFG00000011944	-	91	52.239
ENSGAFG00000019035	-	58	51.754	ENSGAFG00000010524	-	86	51.754
ENSGAFG00000019035	-	53	33.077	ENSGAFG00000003108	-	78	33.878
ENSGAFG00000019035	-	96	43.243	ENSGAFG00000020501	-	98	43.243
ENSGAFG00000019035	-	51	48.905	ENSGAFG00000011924	-	98	53.403

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019035	-	66	40.767	ENSACIG00000017013	-	81	40.418	Amphilophus_citrinellus
ENSGAFG00000019035	-	86	74.945	ENSPFOG00000011209	-	99	70.732	Poecilia_formosa
ENSGAFG00000019035	-	100	96.082	ENSPLAG00000010906	-	100	96.082	Poecilia_latipinna
ENSGAFG00000019035	-	100	96.269	ENSPMEG00000023302	-	100	96.269	Poecilia_mexicana