EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000019284 (Gene tree)
Gene ID: -
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 11487 bases
Position: chrNHOQ01002757.1:476578-488064
Accession: ZDB-GENE-030131-2492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000028522	KH_1	PF00013.29	2.2e-06	1	1
ENSGAFP00000028520	KH_1	PF00013.29	3.2e-06	1	1
ENSGAFP00000028522	zf-CCHC	PF00098.23	0.00024	1	1
ENSGAFP00000028520	zf-CCHC	PF00098.23	0.00045	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000028816	-	2292	-	ENSGAFP00000028520	615 (aa)	-	-
ENSGAFT00000028818	-	1581	-	ENSGAFP00000028522	526 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019284's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019284	sf1	77	89.308	ENSAPOG00000012341	sf1	89	88.962	Acanthochromis_polyacanthus
ENSGAFG00000019284	sf1	76	79.412	ENSAMEG00000017828	SF1	57	84.182	Ailuropoda_melanoleuca
ENSGAFG00000019284	sf1	69	90.164	ENSACIG00000016514	sf1	89	84.918	Amphilophus_citrinellus
ENSGAFG00000019284	sf1	98	89.109	ENSAOCG00000010934	sf1	89	89.109	Amphiprion_ocellaris
ENSGAFG00000019284	sf1	98	89.109	ENSAPEG00000009498	sf1	89	89.109	Amphiprion_percula
ENSGAFG00000019284	sf1	74	89.035	ENSATEG00000001894	sf1	89	88.962	Anabas_testudineus
ENSGAFG00000019284	sf1	78	80.238	ENSANAG00000026664	-	91	83.896	Aotus_nancymaae
ENSGAFG00000019284	sf1	94	65.820	ENSANAG00000022607	-	89	75.269	Aotus_nancymaae
ENSGAFG00000019284	sf1	74	88.571	ENSACLG00000007633	sf1	89	84.262	Astatotilapia_calliptera
ENSGAFG00000019284	sf1	70	87.733	ENSAMXG00000003630	sf1	79	83.333	Astyanax_mexicanus
ENSGAFG00000019284	sf1	78	80.238	ENSBTAG00000001035	SF1	63	83.896	Bos_taurus
ENSGAFG00000019284	sf1	60	51.235	WBGene00013808	sfa-1	52	45.455	Caenorhabditis_elegans
ENSGAFG00000019284	sf1	78	80.238	ENSCJAG00000002780	SF1	75	69.126	Callithrix_jacchus
ENSGAFG00000019284	sf1	78	80.238	ENSCAFG00000014239	SF1	59	83.896	Canis_familiaris
ENSGAFG00000019284	sf1	78	80.238	ENSCAFG00020014381	SF1	59	83.896	Canis_lupus_dingo
ENSGAFG00000019284	sf1	78	80.238	ENSCHIG00000025867	SF1	69	83.896	Capra_hircus
ENSGAFG00000019284	sf1	54	91.579	ENSTSYG00000033618	SF1	84	91.579	Carlito_syrichta
ENSGAFG00000019284	sf1	76	79.167	ENSCAPG00000010762	SF1	66	84.182	Cavia_aperea
ENSGAFG00000019284	sf1	76	79.167	ENSCPOG00000012290	SF1	69	83.554	Cavia_porcellus
ENSGAFG00000019284	sf1	78	70.755	ENSCCAG00000023781	-	84	74.286	Cebus_capucinus
ENSGAFG00000019284	sf1	78	80.238	ENSCCAG00000037881	SF1	91	83.896	Cebus_capucinus
ENSGAFG00000019284	sf1	78	80.238	ENSCATG00000011564	SF1	91	83.896	Cercocebus_atys
ENSGAFG00000019284	sf1	78	80.238	ENSCSAG00000007258	SF1	69	83.896	Chlorocebus_sabaeus
ENSGAFG00000019284	sf1	73	75.448	ENSCHOG00000006008	SF1	66	78.933	Choloepus_hoffmanni
ENSGAFG00000019284	sf1	58	67.197	ENSCING00000005564	-	83	55.765	Ciona_intestinalis
ENSGAFG00000019284	sf1	96	53.257	ENSCSAVG00000009055	-	72	62.013	Ciona_savignyi
ENSGAFG00000019284	sf1	78	80.238	ENSCANG00000042201	SF1	91	83.896	Colobus_angolensis_palliatus
ENSGAFG00000019284	sf1	78	80.476	ENSCGRG00001003677	Sf1	66	84.416	Cricetulus_griseus_chok1gshd
ENSGAFG00000019284	sf1	76	80.637	ENSCGRG00000001708	Sf1	68	84.718	Cricetulus_griseus_crigri
ENSGAFG00000019284	sf1	98	86.139	ENSCSEG00000014375	sf1	86	86.469	Cynoglossus_semilaevis
ENSGAFG00000019284	sf1	98	93.554	ENSCVAG00000001670	sf1	89	93.554	Cyprinodon_variegatus
ENSGAFG00000019284	sf1	93	78.235	ENSDARG00000008188	sf1	90	84.298	Danio_rerio
ENSGAFG00000019284	sf1	78	80.476	ENSDNOG00000001282	SF1	69	84.156	Dasypus_novemcinctus
ENSGAFG00000019284	sf1	78	80.238	ENSDORG00000016334	Sf1	59	83.896	Dipodomys_ordii
ENSGAFG00000019284	sf1	76	73.236	ENSETEG00000012830	SF1	51	76.965	Echinops_telfairi
ENSGAFG00000019284	sf1	95	47.246	ENSEBUG00000012728	sf1	63	55.992	Eptatretus_burgeri
ENSGAFG00000019284	sf1	78	80.238	ENSEASG00005018272	SF1	69	83.896	Equus_asinus_asinus
ENSGAFG00000019284	sf1	78	80.476	ENSECAG00000024544	SF1	69	84.156	Equus_caballus
ENSGAFG00000019284	sf1	68	81.421	ENSEEUG00000001058	SF1	83	85.801	Erinaceus_europaeus
ENSGAFG00000019284	sf1	85	77.425	ENSELUG00000013225	sf1	64	80.855	Esox_lucius
ENSGAFG00000019284	sf1	78	80.238	ENSFCAG00000012231	SF1	75	69.608	Felis_catus
ENSGAFG00000019284	sf1	78	79.327	ENSFDAG00000009833	SF1	66	84.182	Fukomys_damarensis
ENSGAFG00000019284	sf1	98	89.256	ENSFHEG00000022656	sf1	89	89.256	Fundulus_heteroclitus
ENSGAFG00000019284	sf1	83	75.724	ENSGMOG00000007469	sf1	59	93.865	Gadus_morhua
ENSGAFG00000019284	sf1	73	85.859	ENSGACG00000000826	sf1	88	83.804	Gasterosteus_aculeatus
ENSGAFG00000019284	sf1	79	80.523	ENSGAGG00000021691	SF1	68	69.819	Gopherus_agassizii
ENSGAFG00000019284	sf1	74	90.330	ENSHBUG00000011598	sf1	89	88.834	Haplochromis_burtoni
ENSGAFG00000019284	sf1	78	80.238	ENSHGLG00000009541	SF1	66	83.896	Heterocephalus_glaber_female
ENSGAFG00000019284	sf1	76	80.392	ENSHGLG00100013879	-	66	84.182	Heterocephalus_glaber_male
ENSGAFG00000019284	sf1	57	86.755	ENSHGLG00100008076	-	66	83.596	Heterocephalus_glaber_male
ENSGAFG00000019284	sf1	78	70.208	ENSHGLG00100008255	-	72	74.803	Heterocephalus_glaber_male
ENSGAFG00000019284	sf1	76	85.319	ENSHCOG00000011388	sf1	89	85.124	Hippocampus_comes
ENSGAFG00000019284	sf1	81	71.262	ENSSTOG00000024353	-	67	73.475	Ictidomys_tridecemlineatus
ENSGAFG00000019284	sf1	76	80.392	ENSSTOG00000009790	-	59	84.182	Ictidomys_tridecemlineatus
ENSGAFG00000019284	sf1	78	80.476	ENSJJAG00000011788	Sf1	59	84.156	Jaculus_jaculus
ENSGAFG00000019284	sf1	74	91.939	ENSKMAG00000005854	sf1	91	91.107	Kryptolebias_marmoratus
ENSGAFG00000019284	sf1	74	88.817	ENSLBEG00000019836	sf1	75	88.125	Labrus_bergylta
ENSGAFG00000019284	sf1	76	76.214	ENSLACG00000018493	SF1	68	79.420	Latimeria_chalumnae
ENSGAFG00000019284	sf1	70	86.170	ENSLOCG00000002130	sf1	92	78.930	Lepisosteus_oculatus
ENSGAFG00000019284	sf1	76	79.412	ENSLAFG00000007201	SF1	63	84.309	Loxodonta_africana
ENSGAFG00000019284	sf1	78	80.238	ENSMFAG00000033122	SF1	91	83.896	Macaca_fascicularis
ENSGAFG00000019284	sf1	78	80.238	ENSMMUG00000022606	SF1	90	84.182	Macaca_mulatta
ENSGAFG00000019284	sf1	78	80.238	ENSMNEG00000037901	SF1	91	83.896	Macaca_nemestrina
ENSGAFG00000019284	sf1	78	79.616	ENSMLEG00000040706	SF1	91	83.246	Mandrillus_leucophaeus
ENSGAFG00000019284	sf1	74	90.789	ENSMAMG00000001780	sf1	89	89.621	Mastacembelus_armatus
ENSGAFG00000019284	sf1	74	90.330	ENSMZEG00005009196	sf1	89	88.834	Maylandia_zebra
ENSGAFG00000019284	sf1	78	80.476	ENSMAUG00000014064	Sf1	66	84.416	Mesocricetus_auratus
ENSGAFG00000019284	sf1	78	80.238	ENSMICG00000001202	SF1	91	83.679	Microcebus_murinus
ENSGAFG00000019284	sf1	78	80.714	ENSMOCG00000022038	Sf1	66	84.156	Microtus_ochrogaster
ENSGAFG00000019284	sf1	74	86.623	ENSMMOG00000020474	sf1	85	86.082	Mola_mola
ENSGAFG00000019284	sf1	76	79.462	ENSMODG00000029407	SF1	80	84.450	Monodelphis_domestica
ENSGAFG00000019284	sf1	69	90.934	ENSMALG00000020521	sf1	92	84.886	Monopterus_albus
ENSGAFG00000019284	sf1	78	80.476	MGP_CAROLIEiJ_G0022607	Sf1	99	95.489	Mus_caroli
ENSGAFG00000019284	sf1	78	80.476	ENSMUSG00000024949	Sf1	99	95.489	Mus_musculus
ENSGAFG00000019284	sf1	78	80.476	MGP_PahariEiJ_G0014101	Sf1	99	95.489	Mus_pahari
ENSGAFG00000019284	sf1	78	80.476	MGP_SPRETEiJ_G0023518	Sf1	99	95.489	Mus_spretus
ENSGAFG00000019284	sf1	76	80.637	ENSMPUG00000012684	SF1	58	83.598	Mustela_putorius_furo
ENSGAFG00000019284	sf1	76	80.392	ENSMLUG00000015217	-	57	84.182	Myotis_lucifugus
ENSGAFG00000019284	sf1	96	70.690	ENSMLUG00000029800	-	65	80.519	Myotis_lucifugus
ENSGAFG00000019284	sf1	78	80.476	ENSNGAG00000005550	Sf1	66	84.156	Nannospalax_galili
ENSGAFG00000019284	sf1	74	88.571	ENSNBRG00000017606	sf1	89	84.590	Neolamprologus_brichardi
ENSGAFG00000019284	sf1	78	80.238	ENSNLEG00000005236	-	91	83.896	Nomascus_leucogenys
ENSGAFG00000019284	sf1	75	80.893	ENSMEUG00000013424	SF1	68	85.054	Notamacropus_eugenii
ENSGAFG00000019284	sf1	68	81.148	ENSOPRG00000005008	SF1	66	85.196	Ochotona_princeps
ENSGAFG00000019284	sf1	78	77.857	ENSODEG00000006102	-	60	81.299	Octodon_degus
ENSGAFG00000019284	sf1	74	90.110	ENSONIG00000015728	sf1	89	88.670	Oreochromis_niloticus
ENSGAFG00000019284	sf1	64	75.862	ENSOANG00000002909	SF1	76	77.419	Ornithorhynchus_anatinus
ENSGAFG00000019284	sf1	76	79.412	ENSOCUG00000026486	SF1	59	83.598	Oryctolagus_cuniculus
ENSGAFG00000019284	sf1	96	81.092	ENSORLG00000011853	sf1	69	87.315	Oryzias_latipes
ENSGAFG00000019284	sf1	76	87.420	ENSORLG00020011834	sf1	69	87.315	Oryzias_latipes_hni
ENSGAFG00000019284	sf1	74	87.746	ENSORLG00015012855	sf1	66	88.106	Oryzias_latipes_hsok
ENSGAFG00000019284	sf1	74	89.278	ENSOMEG00000005210	sf1	89	88.595	Oryzias_melastigma
ENSGAFG00000019284	sf1	78	80.238	ENSOGAG00000016196	SF1	59	83.896	Otolemur_garnettii
ENSGAFG00000019284	sf1	78	80.238	ENSOARG00000009166	SF1	66	83.896	Ovis_aries
ENSGAFG00000019284	sf1	76	80.392	ENSPPAG00000002799	-	90	83.598	Pan_paniscus
ENSGAFG00000019284	sf1	76	80.392	ENSPPRG00000013566	SF1	57	85.754	Panthera_pardus
ENSGAFG00000019284	sf1	76	80.392	ENSPTIG00000016141	SF1	66	84.182	Panthera_tigris_altaica
ENSGAFG00000019284	sf1	79	80.374	ENSPTRG00000003846	SF1	91	83.896	Pan_troglodytes
ENSGAFG00000019284	sf1	78	80.238	ENSPANG00000020754	SF1	91	83.896	Papio_anubis
ENSGAFG00000019284	sf1	63	81.381	ENSPKIG00000012116	sf1	84	79.580	Paramormyrops_kingsleyae
ENSGAFG00000019284	sf1	60	78.997	ENSPSIG00000003610	SF1	52	84.211	Pelodiscus_sinensis
ENSGAFG00000019284	sf1	78	80.476	ENSPEMG00000010463	Sf1	66	84.416	Peromyscus_maniculatus_bairdii
ENSGAFG00000019284	sf1	78	79.048	ENSPCIG00000018173	SF1	61	84.416	Phascolarctos_cinereus
ENSGAFG00000019284	sf1	100	98.699	ENSPFOG00000013683	sf1	91	98.699	Poecilia_formosa
ENSGAFG00000019284	sf1	93	98.594	ENSPLAG00000018076	sf1	87	98.594	Poecilia_latipinna
ENSGAFG00000019284	sf1	100	98.862	ENSPMEG00000005726	sf1	91	98.862	Poecilia_mexicana
ENSGAFG00000019284	sf1	100	98.049	ENSPREG00000004155	sf1	91	98.049	Poecilia_reticulata
ENSGAFG00000019284	sf1	78	80.238	ENSPPYG00000003098	-	72	83.896	Pongo_abelii
ENSGAFG00000019284	sf1	78	78.554	ENSPCAG00000013631	SF1	75	69.201	Procavia_capensis
ENSGAFG00000019284	sf1	78	80.238	ENSPCOG00000027546	SF1	91	83.679	Propithecus_coquereli
ENSGAFG00000019284	sf1	78	79.759	ENSPVAG00000016938	SF1	75	70.553	Pteropus_vampyrus
ENSGAFG00000019284	sf1	74	90.110	ENSPNYG00000004673	sf1	89	88.670	Pundamilia_nyererei
ENSGAFG00000019284	sf1	70	86.667	ENSPNAG00000013072	sf1	90	82.160	Pygocentrus_nattereri
ENSGAFG00000019284	sf1	78	80.476	ENSRNOG00000021085	Sf1	60	85.016	Rattus_norvegicus
ENSGAFG00000019284	sf1	78	80.238	ENSRBIG00000042818	SF1	91	83.896	Rhinopithecus_bieti
ENSGAFG00000019284	sf1	78	79.616	ENSRROG00000045655	SF1	91	83.246	Rhinopithecus_roxellana
ENSGAFG00000019284	sf1	75	38.631	YLR116W	MSL5	58	42.955	Saccharomyces_cerevisiae
ENSGAFG00000019284	sf1	82	68.182	ENSSBOG00000022267	-	90	71.129	Saimiri_boliviensis_boliviensis
ENSGAFG00000019284	sf1	60	90.252	ENSSHAG00000006841	SF1	68	85.215	Sarcophilus_harrisii
ENSGAFG00000019284	sf1	78	79.917	ENSSFOG00015021978	sf1	69	80.462	Scleropages_formosus
ENSGAFG00000019284	sf1	92	85.763	ENSSMAG00000007549	sf1	89	85.763	Scophthalmus_maximus
ENSGAFG00000019284	sf1	74	89.934	ENSSDUG00000003903	sf1	93	89.474	Seriola_dumerili
ENSGAFG00000019284	sf1	74	89.716	ENSSLDG00000013075	sf1	90	89.309	Seriola_lalandi_dorsalis
ENSGAFG00000019284	sf1	76	76.225	ENSSARG00000008180	SF1	71	79.625	Sorex_araneus
ENSGAFG00000019284	sf1	76	77.829	ENSSPUG00000012907	SF1	58	87.042	Sphenodon_punctatus
ENSGAFG00000019284	sf1	77	89.308	ENSSPAG00000019060	sf1	89	89.109	Stegastes_partitus
ENSGAFG00000019284	sf1	78	80.238	ENSSSCG00000013021	SF1	69	83.896	Sus_scrofa
ENSGAFG00000019284	sf1	56	74.582	ENSTRUG00000022982	sf1	70	74.394	Takifugu_rubripes
ENSGAFG00000019284	sf1	97	70.755	ENSTNIG00000004820	sf1	99	66.038	Tetraodon_nigroviridis
ENSGAFG00000019284	sf1	76	74.265	ENSTBEG00000013133	SF1	53	77.568	Tupaia_belangeri
ENSGAFG00000019284	sf1	76	75.735	ENSTTRG00000008857	SF1	68	79.357	Tursiops_truncatus
ENSGAFG00000019284	sf1	57	77.377	ENSUAMG00000011977	SF1	50	81.955	Ursus_americanus
ENSGAFG00000019284	sf1	78	79.236	ENSUMAG00000007268	SF1	71	83.598	Ursus_maritimus
ENSGAFG00000019284	sf1	78	80.238	ENSVVUG00000028585	SF1	69	83.896	Vulpes_vulpes
ENSGAFG00000019284	sf1	94	72.167	ENSXETG00000008434	sf1	62	85.083	Xenopus_tropicalis
ENSGAFG00000019284	sf1	99	93.295	ENSXCOG00000003704	sf1	98	93.295	Xiphophorus_couchianus
ENSGAFG00000019284	sf1	100	98.862	ENSXMAG00000007822	sf1	93	98.847	Xiphophorus_maculatus