EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000019288 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 3322 bases
Position: chrNHOQ01002757.1:497114-500435
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000028526	zf-CCCH	PF00642.24	8.6e-30	1	4
ENSGAFP00000028526	zf-CCCH	PF00642.24	8.6e-30	2	4
ENSGAFP00000028526	zf-CCCH	PF00642.24	8.6e-30	3	4
ENSGAFP00000028526	zf-CCCH	PF00642.24	8.6e-30	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000028822	-	2618	-	ENSGAFP00000028526	316 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019288's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019288	cth1	90	59.507	ENSAPOG00000012552	cth1	99	62.626	Acanthochromis_polyacanthus
ENSGAFG00000019288	cth1	88	58.156	ENSACIG00000016026	cth1	99	57.276	Amphilophus_citrinellus
ENSGAFG00000019288	cth1	100	61.682	ENSAOCG00000001644	cth1	100	62.461	Amphiprion_ocellaris
ENSGAFG00000019288	cth1	100	61.682	ENSAPEG00000008930	cth1	100	62.461	Amphiprion_percula
ENSGAFG00000019288	cth1	99	64.396	ENSATEG00000002281	cth1	97	65.015	Anabas_testudineus
ENSGAFG00000019288	cth1	90	54.704	ENSACLG00000015353	cth1	100	55.556	Astatotilapia_calliptera
ENSGAFG00000019288	cth1	96	52.665	ENSAMXG00000025717	cth1	97	52.997	Astyanax_mexicanus
ENSGAFG00000019288	cth1	100	57.764	ENSCSEG00000014617	cth1	100	59.133	Cynoglossus_semilaevis
ENSGAFG00000019288	cth1	100	65.000	ENSCVAG00000001680	cth1	65	65.625	Cyprinodon_variegatus
ENSGAFG00000019288	cth1	91	49.333	ENSDARG00000057328	cth1	99	51.220	Danio_rerio
ENSGAFG00000019288	cth1	99	49.258	ENSELUG00000012738	cth1	99	49.408	Esox_lucius
ENSGAFG00000019288	cth1	100	73.734	ENSFHEG00000022665	cth1	100	74.051	Fundulus_heteroclitus
ENSGAFG00000019288	cth1	99	55.937	ENSGMOG00000007360	cth1	100	55.000	Gadus_morhua
ENSGAFG00000019288	cth1	99	57.778	ENSGACG00000000802	cth1	99	57.778	Gasterosteus_aculeatus
ENSGAFG00000019288	cth1	100	55.625	ENSHBUG00000014400	cth1	100	55.385	Haplochromis_burtoni
ENSGAFG00000019288	cth1	99	49.842	ENSHCOG00000010276	cth1	99	49.527	Hippocampus_comes
ENSGAFG00000019288	cth1	96	54.286	ENSIPUG00000018040	cth1	95	52.830	Ictalurus_punctatus
ENSGAFG00000019288	cth1	100	60.883	ENSKMAG00000005944	cth1	100	62.145	Kryptolebias_marmoratus
ENSGAFG00000019288	cth1	100	61.180	ENSLBEG00000019253	cth1	100	61.180	Labrus_bergylta
ENSGAFG00000019288	cth1	67	48.131	ENSLOCG00000002047	cth1	97	48.131	Lepisosteus_oculatus
ENSGAFG00000019288	cth1	99	48.525	ENSMAMG00000001525	cth1	99	48.787	Mastacembelus_armatus
ENSGAFG00000019288	cth1	100	56.250	ENSMZEG00005022335	cth1	100	56.000	Maylandia_zebra
ENSGAFG00000019288	cth1	94	62.541	ENSMMOG00000020518	cth1	100	62.866	Mola_mola
ENSGAFG00000019288	cth1	100	48.525	ENSMALG00000020738	cth1	58	58.371	Monopterus_albus
ENSGAFG00000019288	cth1	89	55.872	ENSNBRG00000022789	cth1	88	55.594	Neolamprologus_brichardi
ENSGAFG00000019288	cth1	99	55.521	ENSONIG00000021318	cth1	99	54.658	Oreochromis_niloticus
ENSGAFG00000019288	cth1	100	54.259	ENSORLG00000022847	cth1	100	55.205	Oryzias_latipes
ENSGAFG00000019288	cth1	100	53.312	ENSORLG00020011979	cth1	100	55.521	Oryzias_latipes_hni
ENSGAFG00000019288	cth1	100	52.848	ENSORLG00015013084	cth1	100	56.151	Oryzias_latipes_hsok
ENSGAFG00000019288	cth1	100	53.312	ENSOMEG00000005809	cth1	85	54.890	Oryzias_melastigma
ENSGAFG00000019288	cth1	96	49.383	ENSPKIG00000015883	cth1	94	48.447	Paramormyrops_kingsleyae
ENSGAFG00000019288	cth1	99	60.494	ENSPMGG00000004275	cth1	100	60.000	Periophthalmus_magnuspinnatus
ENSGAFG00000019288	cth1	100	85.759	ENSPFOG00000013583	cth1	94	85.759	Poecilia_formosa
ENSGAFG00000019288	cth1	100	86.076	ENSPLAG00000018158	cth1	94	86.076	Poecilia_latipinna
ENSGAFG00000019288	cth1	100	85.759	ENSPMEG00000005744	cth1	100	85.759	Poecilia_mexicana
ENSGAFG00000019288	cth1	99	83.810	ENSPREG00000004099	cth1	100	83.810	Poecilia_reticulata
ENSGAFG00000019288	cth1	87	55.556	ENSPNYG00000016705	cth1	89	55.634	Pundamilia_nyererei
ENSGAFG00000019288	cth1	96	52.812	ENSPNAG00000013147	cth1	95	51.402	Pygocentrus_nattereri
ENSGAFG00000019288	cth1	86	52.500	ENSSFOG00015017190	cth1	86	52.688	Scleropages_formosus
ENSGAFG00000019288	cth1	100	59.259	ENSSMAG00000007977	cth1	100	62.928	Scophthalmus_maximus
ENSGAFG00000019288	cth1	100	62.805	ENSSDUG00000004321	cth1	100	63.415	Seriola_dumerili
ENSGAFG00000019288	cth1	100	60.182	ENSSLDG00000004516	-	100	61.398	Seriola_lalandi_dorsalis
ENSGAFG00000019288	cth1	100	60.790	ENSSLDG00000012760	cth1	100	62.006	Seriola_lalandi_dorsalis
ENSGAFG00000019288	cth1	99	60.366	ENSSLDG00000010023	-	100	61.585	Seriola_lalandi_dorsalis
ENSGAFG00000019288	cth1	100	63.722	ENSSPAG00000018659	cth1	100	63.722	Stegastes_partitus
ENSGAFG00000019288	cth1	100	57.944	ENSTRUG00000012770	cth1	100	57.994	Takifugu_rubripes
ENSGAFG00000019288	cth1	100	58.621	ENSTNIG00000000740	cth1	100	58.621	Tetraodon_nigroviridis
ENSGAFG00000019288	cth1	83	72.414	ENSXCOG00000003710	cth1	88	72.137	Xiphophorus_couchianus
ENSGAFG00000019288	cth1	100	88.608	ENSXMAG00000023885	cth1	100	88.608	Xiphophorus_maculatus