EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000019301 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 459 bases
Position: chrNHOQ01002757.1:691213-691671
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000028544	RRM_1	PF00076.22	1.2e-33	1	2
ENSGAFP00000028544	RRM_1	PF00076.22	1.2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000028840	-	459	-	ENSGAFP00000028544	152 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019301's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019301's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000019301	-	50	35.227	ENSGAFG00000008654	cirbpa	51	33.684
ENSGAFG00000019301	-	53	30.337	ENSGAFG00000019917	rbmx	69	33.871
ENSGAFG00000019301	-	67	30.172	ENSGAFG00000006974	msi2a	69	30.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019301	-	93	75.352	ENSAPOG00000012375	-	97	75.352	Acanthochromis_polyacanthus
ENSGAFG00000019301	-	94	78.322	ENSACIG00000016472	-	87	78.322	Amphilophus_citrinellus
ENSGAFG00000019301	-	93	75.352	ENSAOCG00000010907	-	97	75.352	Amphiprion_ocellaris
ENSGAFG00000019301	-	93	75.177	ENSAPEG00000009476	-	88	75.177	Amphiprion_percula
ENSGAFG00000019301	-	91	77.372	ENSATEG00000001912	-	90	77.372	Anabas_testudineus
ENSGAFG00000019301	-	99	54.967	ENSAMXG00000032121	rbm4.2	95	54.967	Astyanax_mexicanus
ENSGAFG00000019301	-	91	49.275	ENSCPBG00000023666	-	92	49.275	Chrysemys_picta_bellii
ENSGAFG00000019301	-	91	69.784	ENSCSEG00000007739	-	99	69.784	Cynoglossus_semilaevis
ENSGAFG00000019301	-	91	72.464	ENSDARG00000036386	rbm4.1	79	72.464	Danio_rerio
ENSGAFG00000019301	-	90	55.714	ENSEBUG00000007174	-	86	55.714	Eptatretus_burgeri
ENSGAFG00000019301	-	100	82.895	ENSFHEG00000003483	-	100	82.895	Fundulus_heteroclitus
ENSGAFG00000019301	-	91	49.275	ENSGAGG00000014558	-	92	49.275	Gopherus_agassizii
ENSGAFG00000019301	-	91	79.856	ENSHBUG00000011624	-	91	79.856	Haplochromis_burtoni
ENSGAFG00000019301	-	99	73.510	ENSHCOG00000011413	-	89	73.510	Hippocampus_comes
ENSGAFG00000019301	-	91	78.261	ENSLBEG00000019756	-	93	78.261	Labrus_bergylta
ENSGAFG00000019301	-	91	54.676	ENSLACG00000006343	zgc:77262	52	54.676	Latimeria_chalumnae
ENSGAFG00000019301	-	91	63.043	ENSLOCG00000002772	rbm4.1	99	63.043	Lepisosteus_oculatus
ENSGAFG00000019301	-	94	72.028	ENSMZEG00005009210	-	80	72.028	Maylandia_zebra
ENSGAFG00000019301	-	91	79.562	ENSMZEG00005028160	-	93	79.562	Maylandia_zebra
ENSGAFG00000019301	-	93	57.042	ENSMZEG00005028161	-	79	57.042	Maylandia_zebra
ENSGAFG00000019301	-	91	78.261	ENSMMOG00000020484	-	86	78.261	Mola_mola
ENSGAFG00000019301	-	91	79.856	ENSNBRG00000017763	-	90	79.856	Neolamprologus_brichardi
ENSGAFG00000019301	-	92	67.143	ENSPKIG00000020805	rbm4.1	85	68.116	Paramormyrops_kingsleyae
ENSGAFG00000019301	-	93	70.213	ENSPMGG00000004331	rbm4.1	94	70.213	Periophthalmus_magnuspinnatus
ENSGAFG00000019301	-	90	49.635	ENSPMAG00000003433	rbm4.2	69	49.635	Petromyzon_marinus
ENSGAFG00000019301	-	91	95.652	ENSPLAG00000018569	-	88	95.652	Poecilia_latipinna
ENSGAFG00000019301	-	91	95.652	ENSPMEG00000006278	-	88	95.652	Poecilia_mexicana
ENSGAFG00000019301	-	91	79.856	ENSPNYG00000004649	-	90	79.856	Pundamilia_nyererei
ENSGAFG00000019301	-	91	54.478	ENSSFOG00015018567	zgc:77262	89	54.478	Scleropages_formosus
ENSGAFG00000019301	-	96	76.712	ENSSMAG00000007575	-	94	76.712	Scophthalmus_maximus
ENSGAFG00000019301	-	100	96.711	ENSXCOG00000003730	-	94	96.711	Xiphophorus_couchianus