EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000019302 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA binding motif protein 4.1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5664 bases
Position: chrNHOQ01002757.1:694189-699852
Accession: ZDB-GENE-030131-3902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000028545	zf-CCHC	PF00098.23	5.8e-08	1	1
ENSGAFP00000028545	RRM_5	PF13893.6	2.3e-08	1	1
ENSGAFP00000028545	RRM_1	PF00076.22	8.9e-32	1	2
ENSGAFP00000028545	RRM_1	PF00076.22	8.9e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000028841	-	2999	-	ENSGAFP00000028545	419 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019302's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000019302	rbm4.1	65	54.000	ENSGAFG00000001935	rbm4.3	100	53.595

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019302	rbm4.1	100	78.251	ENSAPOG00000012353	rbm4.1	100	78.960	Acanthochromis_polyacanthus
ENSGAFG00000019302	rbm4.1	100	77.305	ENSACIG00000016482	rbm4.1	100	77.778	Amphilophus_citrinellus
ENSGAFG00000019302	rbm4.1	100	78.960	ENSAOCG00000010915	rbm4.1	100	79.669	Amphiprion_ocellaris
ENSGAFG00000019302	rbm4.1	100	78.960	ENSAPEG00000009494	rbm4.1	100	79.669	Amphiprion_percula
ENSGAFG00000019302	rbm4.1	100	78.960	ENSATEG00000001904	rbm4.1	100	79.669	Anabas_testudineus
ENSGAFG00000019302	rbm4.1	96	48.166	ENSACLG00000007740	-	94	49.377	Astatotilapia_calliptera
ENSGAFG00000019302	rbm4.1	100	76.596	ENSACLG00000007722	rbm4.1	100	77.069	Astatotilapia_calliptera
ENSGAFG00000019302	rbm4.1	100	60.993	ENSAMXG00000036611	rbm4.1	100	61.702	Astyanax_mexicanus
ENSGAFG00000019302	rbm4.1	94	49.751	ENSCSEG00000014359	-	94	49.510	Cynoglossus_semilaevis
ENSGAFG00000019302	rbm4.1	100	69.905	ENSCSEG00000014365	rbm4.1	100	69.905	Cynoglossus_semilaevis
ENSGAFG00000019302	rbm4.1	100	85.680	ENSCVAG00000019349	rbm4.1	100	86.396	Cyprinodon_variegatus
ENSGAFG00000019302	rbm4.1	100	64.706	ENSDARG00000036386	rbm4.1	100	65.647	Danio_rerio
ENSGAFG00000019302	rbm4.1	75	71.111	ENSDARG00000055080	rbm4.2	100	49.764	Danio_rerio
ENSGAFG00000019302	rbm4.1	100	61.882	ENSELUG00000013205	rbm4.1	100	62.676	Esox_lucius
ENSGAFG00000019302	rbm4.1	100	86.635	ENSFHEG00000022926	rbm4.1	100	86.635	Fundulus_heteroclitus
ENSGAFG00000019302	rbm4.1	92	48.849	ENSGMOG00000007455	-	92	51.531	Gadus_morhua
ENSGAFG00000019302	rbm4.1	100	63.294	ENSGMOG00000007464	rbm4.1	100	65.802	Gadus_morhua
ENSGAFG00000019302	rbm4.1	94	50.743	ENSGACG00000000821	-	94	50.000	Gasterosteus_aculeatus
ENSGAFG00000019302	rbm4.1	99	87.500	ENSGACG00000000822	rbm4.1	100	87.500	Gasterosteus_aculeatus
ENSGAFG00000019302	rbm4.1	100	76.596	ENSHBUG00000011610	rbm4.1	100	77.069	Haplochromis_burtoni
ENSGAFG00000019302	rbm4.1	92	66.240	ENSHCOG00000011403	rbm4.1	95	67.092	Hippocampus_comes
ENSGAFG00000019302	rbm4.1	100	60.909	ENSIPUG00000022931	rbm4.1	100	62.132	Ictalurus_punctatus
ENSGAFG00000019302	rbm4.1	100	49.644	ENSIPUG00000022937	rbm4.2	100	50.355	Ictalurus_punctatus
ENSGAFG00000019302	rbm4.1	99	43.349	ENSKMAG00000006528	-	99	45.266	Kryptolebias_marmoratus
ENSGAFG00000019302	rbm4.1	100	76.540	ENSKMAG00000006556	rbm4.1	100	77.251	Kryptolebias_marmoratus
ENSGAFG00000019302	rbm4.1	94	49.127	ENSLBEG00000019756	-	90	62.179	Labrus_bergylta
ENSGAFG00000019302	rbm4.1	100	75.355	ENSLBEG00000019782	rbm4.1	100	75.355	Labrus_bergylta
ENSGAFG00000019302	rbm4.1	100	78.723	ENSMAMG00000001765	rbm4.1	100	79.433	Mastacembelus_armatus
ENSGAFG00000019302	rbm4.1	99	51.887	ENSMAMG00000001760	-	100	51.887	Mastacembelus_armatus
ENSGAFG00000019302	rbm4.1	100	76.596	ENSMZEG00005009205	rbm4.1	100	77.069	Maylandia_zebra
ENSGAFG00000019302	rbm4.1	100	77.176	ENSMMOG00000020479	rbm4.1	100	77.176	Mola_mola
ENSGAFG00000019302	rbm4.1	100	77.725	ENSMALG00000020544	rbm4.1	100	78.436	Monopterus_albus
ENSGAFG00000019302	rbm4.1	94	52.500	ENSMALG00000020557	-	94	52.500	Monopterus_albus
ENSGAFG00000019302	rbm4.1	100	76.832	ENSNBRG00000017755	rbm4.1	100	77.305	Neolamprologus_brichardi
ENSGAFG00000019302	rbm4.1	100	76.832	ENSONIG00000015730	rbm4.1	100	77.305	Oreochromis_niloticus
ENSGAFG00000019302	rbm4.1	100	75.476	ENSORLG00000012496	rbm4.1	100	75.476	Oryzias_latipes
ENSGAFG00000019302	rbm4.1	100	75.476	ENSORLG00020012454	rbm4.1	100	75.476	Oryzias_latipes_hni
ENSGAFG00000019302	rbm4.1	100	75.714	ENSORLG00015013678	rbm4.1	100	75.714	Oryzias_latipes_hsok
ENSGAFG00000019302	rbm4.1	100	75.952	ENSOMEG00000001001	rbm4.1	100	75.952	Oryzias_melastigma
ENSGAFG00000019302	rbm4.1	100	59.302	ENSPKIG00000020805	rbm4.1	85	80.435	Paramormyrops_kingsleyae
ENSGAFG00000019302	rbm4.1	100	99.761	ENSPFOG00000012675	rbm4.1	100	99.761	Poecilia_formosa
ENSGAFG00000019302	rbm4.1	99	46.635	ENSPFOG00000012685	-	99	47.837	Poecilia_formosa
ENSGAFG00000019302	rbm4.1	100	99.761	ENSPLAG00000018572	rbm4.1	100	99.761	Poecilia_latipinna
ENSGAFG00000019302	rbm4.1	100	99.761	ENSPMEG00000006290	rbm4.1	100	99.761	Poecilia_mexicana
ENSGAFG00000019302	rbm4.1	99	44.952	ENSPREG00000003764	-	99	44.028	Poecilia_reticulata
ENSGAFG00000019302	rbm4.1	100	99.761	ENSPREG00000003724	rbm4.1	100	99.761	Poecilia_reticulata
ENSGAFG00000019302	rbm4.1	100	76.596	ENSPNYG00000004662	rbm4.1	100	77.069	Pundamilia_nyererei
ENSGAFG00000019302	rbm4.1	100	50.000	ENSPNAG00000013057	rbm4.2	100	50.236	Pygocentrus_nattereri
ENSGAFG00000019302	rbm4.1	100	63.232	ENSPNAG00000002539	rbm4.1	100	64.733	Pygocentrus_nattereri
ENSGAFG00000019302	rbm4.1	100	61.111	ENSSFOG00015021996	sf1	100	62.558	Scleropages_formosus
ENSGAFG00000019302	rbm4.1	100	74.882	ENSSMAG00000007571	rbm4.1	100	74.645	Scophthalmus_maximus
ENSGAFG00000019302	rbm4.1	100	77.541	ENSSDUG00000003925	rbm4.1	100	78.960	Seriola_dumerili
ENSGAFG00000019302	rbm4.1	94	53.401	ENSSDUG00000003936	-	94	54.386	Seriola_dumerili
ENSGAFG00000019302	rbm4.1	94	52.393	ENSSLDG00000013157	-	94	52.393	Seriola_lalandi_dorsalis
ENSGAFG00000019302	rbm4.1	100	77.541	ENSSLDG00000013147	rbm4.1	100	78.960	Seriola_lalandi_dorsalis
ENSGAFG00000019302	rbm4.1	100	78.302	ENSSPAG00000019053	rbm4.1	100	79.953	Stegastes_partitus
ENSGAFG00000019302	rbm4.1	99	47.608	ENSSPAG00000019046	-	99	46.651	Stegastes_partitus
ENSGAFG00000019302	rbm4.1	99	47.143	ENSTRUG00000013328	-	99	46.667	Takifugu_rubripes
ENSGAFG00000019302	rbm4.1	100	71.801	ENSTRUG00000013334	rbm4.1	100	72.038	Takifugu_rubripes
ENSGAFG00000019302	rbm4.1	81	82.791	ENSTNIG00000004821	rbm4.1	100	54.286	Tetraodon_nigroviridis
ENSGAFG00000019302	rbm4.1	96	48.522	ENSTNIG00000000316	-	96	48.780	Tetraodon_nigroviridis
ENSGAFG00000019302	rbm4.1	100	99.284	ENSXCOG00000003731	rbm4.1	100	99.284	Xiphophorus_couchianus
ENSGAFG00000019302	rbm4.1	99	47.837	ENSXMAG00000008059	-	95	73.006	Xiphophorus_maculatus
ENSGAFG00000019302	rbm4.1	100	99.523	ENSXMAG00000008069	rbm4.1	100	99.523	Xiphophorus_maculatus