EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000019364 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 12931 bases
Position: chrNHOQ01002480.1:640493-653423
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000028654	PAM2	PF07145.15	2.3e-05	1	1
ENSGAFP00000028654	LsmAD	PF06741.13	7.3e-18	1	1
ENSGAFP00000028654	SM-ATX	PF14438.6	3.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000028951	-	3366	-	ENSGAFP00000028654	736 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019364	-	99	81.386	ENSAPOG00000021412	-	71	81.522	Acanthochromis_polyacanthus
ENSGAFG00000019364	-	80	68.030	ENSACIG00000024435	atxn2l	52	53.510	Amphilophus_citrinellus
ENSGAFG00000019364	-	76	79.688	ENSACIG00000014731	-	66	79.286	Amphilophus_citrinellus
ENSGAFG00000019364	-	83	87.143	ENSAOCG00000002581	-	68	83.861	Amphiprion_ocellaris
ENSGAFG00000019364	-	99	84.239	ENSAPEG00000011038	-	71	84.918	Amphiprion_percula
ENSGAFG00000019364	-	99	83.515	ENSATEG00000019382	-	69	82.425	Anabas_testudineus
ENSGAFG00000019364	-	99	79.864	ENSACLG00000009975	-	70	80.136	Astatotilapia_calliptera
ENSGAFG00000019364	-	81	75.000	ENSAMXG00000003332	atxn2l	62	75.000	Astyanax_mexicanus
ENSGAFG00000019364	-	97	58.792	ENSAMXG00000020362	-	68	56.574	Astyanax_mexicanus
ENSGAFG00000019364	-	77	64.419	ENSTSYG00000013854	ATXN2L	52	64.074	Carlito_syrichta
ENSGAFG00000019364	-	78	64.045	ENSCGRG00001017114	Atxn2l	53	63.704	Cricetulus_griseus_chok1gshd
ENSGAFG00000019364	-	99	87.260	ENSCVAG00000015825	-	71	86.712	Cyprinodon_variegatus
ENSGAFG00000019364	-	99	51.715	ENSDARG00000011597	atxn2l	69	52.075	Danio_rerio
ENSGAFG00000019364	-	99	62.500	ENSELUG00000022915	-	71	61.260	Esox_lucius
ENSGAFG00000019364	-	98	53.495	ENSELUG00000023740	atxn2l	68	52.561	Esox_lucius
ENSGAFG00000019364	-	82	78.583	ENSFHEG00000004491	-	74	77.414	Fundulus_heteroclitus
ENSGAFG00000019364	-	70	61.905	ENSGMOG00000000316	atxn2l	67	60.000	Gadus_morhua
ENSGAFG00000019364	-	99	73.433	ENSGACG00000007446	-	71	73.370	Gasterosteus_aculeatus
ENSGAFG00000019364	-	99	79.728	ENSHBUG00000007997	-	71	80.000	Haplochromis_burtoni
ENSGAFG00000019364	-	82	84.536	ENSHCOG00000017587	-	61	78.988	Hippocampus_comes
ENSGAFG00000019364	-	99	55.701	ENSIPUG00000001761	atxn2l	68	54.128	Ictalurus_punctatus
ENSGAFG00000019364	-	99	82.763	ENSKMAG00000021450	-	71	84.131	Kryptolebias_marmoratus
ENSGAFG00000019364	-	99	76.391	ENSLBEG00000022720	-	69	78.078	Labrus_bergylta
ENSGAFG00000019364	-	71	48.087	ENSLBEG00000006525	atxn2l	68	41.667	Labrus_bergylta
ENSGAFG00000019364	-	77	64.286	ENSMFAG00000030590	ATXN2L	53	63.941	Macaca_fascicularis
ENSGAFG00000019364	-	99	79.645	ENSMAMG00000013005	-	69	80.055	Mastacembelus_armatus
ENSGAFG00000019364	-	99	79.864	ENSMZEG00005013869	-	70	80.136	Maylandia_zebra
ENSGAFG00000019364	-	77	64.045	ENSMAUG00000011753	Atxn2l	52	63.704	Mesocricetus_auratus
ENSGAFG00000019364	-	77	64.419	ENSMOCG00000020882	Atxn2l	65	63.137	Microtus_ochrogaster
ENSGAFG00000019364	-	93	65.136	ENSMMOG00000001440	-	67	69.666	Mola_mola
ENSGAFG00000019364	-	80	77.570	ENSMALG00000008430	-	63	78.302	Monopterus_albus
ENSGAFG00000019364	-	65	53.254	ENSMALG00000000334	atxn2l	50	53.686	Monopterus_albus
ENSGAFG00000019364	-	77	64.419	MGP_CAROLIEiJ_G0030450	Atxn2l	77	67.059	Mus_caroli
ENSGAFG00000019364	-	77	64.419	ENSMUSG00000032637	Atxn2l	77	67.059	Mus_musculus
ENSGAFG00000019364	-	77	64.419	MGP_SPRETEiJ_G0031564	Atxn2l	77	67.059	Mus_spretus
ENSGAFG00000019364	-	73	79.083	ENSNBRG00000012039	-	57	79.083	Neolamprologus_brichardi
ENSGAFG00000019364	-	68	52.510	ENSNBRG00000020833	-	81	46.111	Neolamprologus_brichardi
ENSGAFG00000019364	-	99	81.497	ENSONIG00000011478	-	71	80.680	Oreochromis_niloticus
ENSGAFG00000019364	-	73	52.920	ENSONIG00000009388	atxn2l	63	70.741	Oreochromis_niloticus
ENSGAFG00000019364	-	99	77.007	ENSORLG00000006059	-	70	77.341	Oryzias_latipes
ENSGAFG00000019364	-	99	76.798	ENSORLG00020000991	-	70	77.205	Oryzias_latipes_hni
ENSGAFG00000019364	-	99	77.069	ENSORLG00015014174	-	70	77.341	Oryzias_latipes_hsok
ENSGAFG00000019364	-	99	77.551	ENSOMEG00000021118	-	70	77.551	Oryzias_melastigma
ENSGAFG00000019364	-	99	95.736	ENSPFOG00000005935	-	71	95.736	Poecilia_formosa
ENSGAFG00000019364	-	99	96.286	ENSPLAG00000017094	-	71	96.286	Poecilia_latipinna
ENSGAFG00000019364	-	99	95.598	ENSPMEG00000017227	-	71	95.598	Poecilia_mexicana
ENSGAFG00000019364	-	99	96.561	ENSPREG00000023090	-	71	96.561	Poecilia_reticulata
ENSGAFG00000019364	-	99	79.864	ENSPNYG00000017058	-	70	80.136	Pundamilia_nyererei
ENSGAFG00000019364	-	99	55.716	ENSPNAG00000014538	atxn2l	69	54.847	Pygocentrus_nattereri
ENSGAFG00000019364	-	97	56.528	ENSPNAG00000023685	-	69	56.680	Pygocentrus_nattereri
ENSGAFG00000019364	-	66	64.151	ENSSBOG00000025782	ATXN2L	57	64.151	Saimiri_boliviensis_boliviensis
ENSGAFG00000019364	-	99	54.133	ENSSFOG00015001018	atxn2l	69	50.744	Scleropages_formosus
ENSGAFG00000019364	-	99	81.088	ENSSMAG00000016932	-	69	81.497	Scophthalmus_maximus
ENSGAFG00000019364	-	99	83.810	ENSSDUG00000023014	-	71	84.218	Seriola_dumerili
ENSGAFG00000019364	-	85	70.253	ENSSLDG00000017701	-	74	64.562	Seriola_lalandi_dorsalis
ENSGAFG00000019364	-	74	61.382	ENSSARG00000009732	ATXN2L	57	61.044	Sorex_araneus
ENSGAFG00000019364	-	99	83.469	ENSSPAG00000008174	-	70	83.740	Stegastes_partitus
ENSGAFG00000019364	-	97	78.779	ENSTRUG00000007132	-	69	79.127	Takifugu_rubripes
ENSGAFG00000019364	-	99	76.132	ENSTNIG00000018942	-	70	75.720	Tetraodon_nigroviridis
ENSGAFG00000019364	-	74	96.078	ENSXCOG00000001128	-	66	96.078	Xiphophorus_couchianus
ENSGAFG00000019364	-	99	96.849	ENSXMAG00000010133	-	72	96.849	Xiphophorus_maculatus