EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000019423 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 6814 bases
Position: chrNHOQ01002849.1:322709-329522
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000028747	MMR_HSR1	PF01926.23	7.8e-07	1	1
ENSGAFP00000028748	MMR_HSR1	PF01926.23	8.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000029045	-	2207	-	ENSGAFP00000028748	467 (aa)	-	-
ENSGAFT00000029044	-	1997	-	ENSGAFP00000028747	455 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000019423	-	59	32.353	ENSGAFG00000007761	-	60	32.353
ENSGAFG00000019423	-	64	34.448	ENSGAFG00000019143	zgc:153654	61	35.000
ENSGAFG00000019423	-	71	60.816	ENSGAFG00000019422	-	94	60.816

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019423	-	57	46.538	ENSACIG00000015684	-	92	46.538	Amphilophus_citrinellus
ENSGAFG00000019423	-	57	43.077	ENSACIG00000004501	-	90	43.077	Amphilophus_citrinellus
ENSGAFG00000019423	-	57	48.263	ENSACIG00000004426	-	88	48.263	Amphilophus_citrinellus
ENSGAFG00000019423	-	57	43.462	ENSACIG00000004521	-	91	43.462	Amphilophus_citrinellus
ENSGAFG00000019423	-	55	45.238	ENSACIG00000015237	-	93	45.238	Amphilophus_citrinellus
ENSGAFG00000019423	-	59	44.280	ENSACIG00000004408	-	93	44.280	Amphilophus_citrinellus
ENSGAFG00000019423	-	58	44.853	ENSACIG00000015616	-	97	44.853	Amphilophus_citrinellus
ENSGAFG00000019423	-	62	47.163	ENSACIG00000000741	-	99	47.163	Amphilophus_citrinellus
ENSGAFG00000019423	-	60	43.911	ENSACIG00000004444	-	97	43.911	Amphilophus_citrinellus
ENSGAFG00000019423	-	64	46.780	ENSAOCG00000002056	-	95	46.780	Amphiprion_ocellaris
ENSGAFG00000019423	-	60	47.273	ENSAPEG00000021053	-	97	47.273	Amphiprion_percula
ENSGAFG00000019423	-	60	45.221	ENSATEG00000002869	-	96	43.431	Anabas_testudineus
ENSGAFG00000019423	-	62	49.117	ENSATEG00000002718	-	88	49.117	Anabas_testudineus
ENSGAFG00000019423	-	60	38.545	ENSACLG00000002020	-	99	38.545	Astatotilapia_calliptera
ENSGAFG00000019423	-	61	51.613	ENSACLG00000010292	-	99	51.613	Astatotilapia_calliptera
ENSGAFG00000019423	-	52	39.916	ENSACLG00000016390	-	91	39.583	Astatotilapia_calliptera
ENSGAFG00000019423	-	58	44.867	ENSACLG00000016487	-	87	44.106	Astatotilapia_calliptera
ENSGAFG00000019423	-	57	40.755	ENSACLG00000027615	-	98	40.755	Astatotilapia_calliptera
ENSGAFG00000019423	-	57	54.580	ENSACLG00000018321	-	91	54.580	Astatotilapia_calliptera
ENSGAFG00000019423	-	54	32.549	ENSAMXG00000037563	-	87	32.549	Astyanax_mexicanus
ENSGAFG00000019423	-	57	44.615	ENSCSEG00000018832	-	96	44.615	Cynoglossus_semilaevis
ENSGAFG00000019423	-	56	44.706	ENSCVAG00000023166	-	96	44.706	Cyprinodon_variegatus
ENSGAFG00000019423	-	55	40.392	ENSCVAG00000007214	-	97	37.647	Cyprinodon_variegatus
ENSGAFG00000019423	-	62	50.355	ENSCVAG00000016719	-	98	50.355	Cyprinodon_variegatus
ENSGAFG00000019423	-	60	34.875	ENSDARG00000029720	si:dkeyp-9d4.2	93	32.975	Danio_rerio
ENSGAFG00000019423	-	60	32.000	ENSDARG00000075791	si:dkey-79f11.5	87	30.182	Danio_rerio
ENSGAFG00000019423	-	60	31.636	ENSDARG00000092634	CABZ01000634.1	93	30.545	Danio_rerio
ENSGAFG00000019423	-	53	34.677	ENSDARG00000095309	si:dkey-79f11.9	88	34.677	Danio_rerio
ENSGAFG00000019423	-	60	32.364	ENSDARG00000093857	si:dkey-79f11.10	85	31.273	Danio_rerio
ENSGAFG00000019423	-	60	30.909	ENSDARG00000010729	CABZ01073795.1	94	30.909	Danio_rerio
ENSGAFG00000019423	-	60	34.532	ENSDARG00000107486	CR855320.3	94	33.094	Danio_rerio
ENSGAFG00000019423	-	60	33.818	ENSDARG00000095673	si:dkey-79f11.8	86	32.624	Danio_rerio
ENSGAFG00000019423	-	60	44.161	ENSFHEG00000018069	-	93	41.392	Fundulus_heteroclitus
ENSGAFG00000019423	-	56	41.538	ENSFHEG00000021105	-	87	41.538	Fundulus_heteroclitus
ENSGAFG00000019423	-	56	43.969	ENSFHEG00000018078	-	93	41.634	Fundulus_heteroclitus
ENSGAFG00000019423	-	60	44.853	ENSGACG00000012548	-	92	44.853	Gasterosteus_aculeatus
ENSGAFG00000019423	-	60	45.588	ENSGACG00000012556	-	87	45.588	Gasterosteus_aculeatus
ENSGAFG00000019423	-	59	45.149	ENSGACG00000001319	-	99	45.149	Gasterosteus_aculeatus
ENSGAFG00000019423	-	58	42.586	ENSHBUG00000010945	-	96	42.586	Haplochromis_burtoni
ENSGAFG00000019423	-	59	36.630	ENSIPUG00000006852	-	86	36.462	Ictalurus_punctatus
ENSGAFG00000019423	-	60	35.897	ENSIPUG00000007632	-	78	36.000	Ictalurus_punctatus
ENSGAFG00000019423	-	58	37.970	ENSIPUG00000005624	-	97	37.970	Ictalurus_punctatus
ENSGAFG00000019423	-	56	41.406	ENSKMAG00000000325	-	91	41.406	Kryptolebias_marmoratus
ENSGAFG00000019423	-	56	41.406	ENSKMAG00000000369	-	93	38.039	Kryptolebias_marmoratus
ENSGAFG00000019423	-	55	44.882	ENSKMAG00000006729	-	93	45.059	Kryptolebias_marmoratus
ENSGAFG00000019423	-	56	49.609	ENSMAMG00000003570	-	89	49.609	Mastacembelus_armatus
ENSGAFG00000019423	-	78	48.913	ENSMAMG00000003546	-	91	48.913	Mastacembelus_armatus
ENSGAFG00000019423	-	57	45.594	ENSMZEG00005008301	-	98	44.828	Maylandia_zebra
ENSGAFG00000019423	-	60	50.730	ENSMZEG00005015498	-	95	47.653	Maylandia_zebra
ENSGAFG00000019423	-	58	44.867	ENSMZEG00005008329	-	99	44.867	Maylandia_zebra
ENSGAFG00000019423	-	54	44.082	ENSNBRG00000020781	-	98	44.082	Neolamprologus_brichardi
ENSGAFG00000019423	-	59	51.852	ENSNBRG00000023290	-	91	51.852	Neolamprologus_brichardi
ENSGAFG00000019423	-	58	44.487	ENSNBRG00000022075	-	93	44.487	Neolamprologus_brichardi
ENSGAFG00000019423	-	59	44.776	ENSNBRG00000020806	-	91	44.776	Neolamprologus_brichardi
ENSGAFG00000019423	-	59	39.259	ENSNBRG00000020744	-	91	39.259	Neolamprologus_brichardi
ENSGAFG00000019423	-	57	44.444	ENSNBRG00000006414	-	88	44.444	Neolamprologus_brichardi
ENSGAFG00000019423	-	57	44.444	ENSNBRG00000006386	-	98	44.444	Neolamprologus_brichardi
ENSGAFG00000019423	-	60	52.206	ENSNBRG00000024253	-	92	52.206	Neolamprologus_brichardi
ENSGAFG00000019423	-	56	43.580	ENSONIG00000015371	-	99	43.580	Oreochromis_niloticus
ENSGAFG00000019423	-	55	42.742	ENSONIG00000017465	-	99	42.742	Oreochromis_niloticus
ENSGAFG00000019423	-	53	44.033	ENSONIG00000012317	-	97	44.033	Oreochromis_niloticus
ENSGAFG00000019423	-	57	45.385	ENSONIG00000012319	-	99	45.385	Oreochromis_niloticus
ENSGAFG00000019423	-	59	44.569	ENSONIG00000015247	-	93	44.569	Oreochromis_niloticus
ENSGAFG00000019423	-	57	46.923	ENSONIG00000015167	-	100	46.923	Oreochromis_niloticus
ENSGAFG00000019423	-	53	44.398	ENSONIG00000016843	-	97	42.739	Oreochromis_niloticus
ENSGAFG00000019423	-	60	47.826	ENSONIG00000018790	-	98	47.059	Oreochromis_niloticus
ENSGAFG00000019423	-	59	43.333	ENSPMGG00000012906	-	95	43.333	Periophthalmus_magnuspinnatus
ENSGAFG00000019423	-	62	39.085	ENSPMGG00000022341	-	86	38.542	Periophthalmus_magnuspinnatus
ENSGAFG00000019423	-	60	37.634	ENSPMGG00000004994	-	95	37.993	Periophthalmus_magnuspinnatus
ENSGAFG00000019423	-	56	39.847	ENSPMGG00000002695	-	98	39.847	Periophthalmus_magnuspinnatus
ENSGAFG00000019423	-	78	68.978	ENSPFOG00000015382	-	95	68.978	Poecilia_formosa
ENSGAFG00000019423	-	93	78.066	ENSPFOG00000015493	-	97	81.443	Poecilia_formosa
ENSGAFG00000019423	-	58	43.820	ENSPFOG00000003841	-	93	44.322	Poecilia_formosa
ENSGAFG00000019423	-	59	44.118	ENSPFOG00000003807	-	94	44.118	Poecilia_formosa
ENSGAFG00000019423	-	59	44.776	ENSPFOG00000015455	-	89	44.776	Poecilia_formosa
ENSGAFG00000019423	-	57	38.168	ENSPLAG00000018274	-	92	37.786	Poecilia_latipinna
ENSGAFG00000019423	-	57	44.788	ENSPMEG00000018626	-	91	44.788	Poecilia_mexicana
ENSGAFG00000019423	-	78	68.132	ENSPMEG00000018635	-	95	68.132	Poecilia_mexicana
ENSGAFG00000019423	-	61	42.279	ENSPREG00000005137	-	90	42.703	Poecilia_reticulata
ENSGAFG00000019423	-	59	44.649	ENSPNYG00000024019	-	91	44.649	Pundamilia_nyererei
ENSGAFG00000019423	-	60	43.382	ENSPNYG00000005478	-	94	43.382	Pundamilia_nyererei
ENSGAFG00000019423	-	64	49.829	ENSPNYG00000001584	-	98	49.829	Pundamilia_nyererei
ENSGAFG00000019423	-	58	33.835	ENSPNAG00000009266	-	97	33.829	Pygocentrus_nattereri
ENSGAFG00000019423	-	55	33.585	ENSPNAG00000006327	-	68	32.258	Pygocentrus_nattereri
ENSGAFG00000019423	-	58	51.880	ENSSDUG00000002359	-	98	51.880	Seriola_dumerili
ENSGAFG00000019423	-	58	51.880	ENSSDUG00000002417	-	98	50.752	Seriola_dumerili
ENSGAFG00000019423	-	60	51.282	ENSSLDG00000008952	-	95	50.916	Seriola_lalandi_dorsalis
ENSGAFG00000019423	-	58	43.609	ENSSLDG00000016397	-	97	43.774	Seriola_lalandi_dorsalis
ENSGAFG00000019423	-	59	46.269	ENSSPAG00000012856	-	94	46.269	Stegastes_partitus
ENSGAFG00000019423	-	57	42.586	ENSSPAG00000012915	-	98	42.586	Stegastes_partitus
ENSGAFG00000019423	-	60	42.294	ENSXMAG00000029117	-	98	39.785	Xiphophorus_maculatus
ENSGAFG00000019423	-	76	77.168	ENSXMAG00000009971	-	83	77.168	Xiphophorus_maculatus
ENSGAFG00000019423	-	77	65.441	ENSXMAG00000009973	-	93	66.412	Xiphophorus_maculatus