EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000019460 (Gene tree)
Gene ID: -
Gene Symbol: scaf4a
Alias: fa96d07|si:dkey-50p8.3|wu:fa96d07
Full Name: SR-related CTD-associated factor 4a
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 12823 bases
Position: chrNHOQ01001678.1:11276052-11288874
Accession: ZDB-GENE-030131-9003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000028814	RRM_1	PF00076.22	8.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000029112	-	5987	-	ENSGAFP00000028814	898 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019460's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019460	scaf4a	83	82.075	ENSAPOG00000002946	scaf4a	67	81.184	Acanthochromis_polyacanthus
ENSGAFG00000019460	scaf4a	83	82.861	ENSAOCG00000000615	scaf4a	67	81.950	Amphiprion_ocellaris
ENSGAFG00000019460	scaf4a	83	82.726	ENSAPEG00000021229	scaf4a	67	81.818	Amphiprion_percula
ENSGAFG00000019460	scaf4a	51	75.676	ENSCAFG00020026019	SCAF4	73	62.917	Canis_lupus_dingo
ENSGAFG00000019460	scaf4a	94	66.235	ENSCSEG00000019549	scaf4a	64	71.371	Cynoglossus_semilaevis
ENSGAFG00000019460	scaf4a	75	46.110	ENSCSEG00000012808	-	78	49.008	Cynoglossus_semilaevis
ENSGAFG00000019460	scaf4a	87	55.893	ENSDARG00000077093	scaf4a	67	57.592	Danio_rerio
ENSGAFG00000019460	scaf4a	57	84.375	ENSELUG00000009909	scaf4a	56	84.817	Esox_lucius
ENSGAFG00000019460	scaf4a	86	85.161	ENSFHEG00000017866	scaf4a	62	86.458	Fundulus_heteroclitus
ENSGAFG00000019460	scaf4a	78	72.644	ENSGACG00000020580	scaf4a	69	77.972	Gasterosteus_aculeatus
ENSGAFG00000019460	scaf4a	82	81.486	ENSHBUG00000007920	scaf4a	64	81.486	Haplochromis_burtoni
ENSGAFG00000019460	scaf4a	77	69.811	ENSIPUG00000011285	scaf4	73	71.154	Ictalurus_punctatus
ENSGAFG00000019460	scaf4a	56	60.965	ENSKMAG00000005742	scaf4b	56	63.784	Kryptolebias_marmoratus
ENSGAFG00000019460	scaf4a	84	75.694	ENSLBEG00000014675	scaf4a	65	79.243	Labrus_bergylta
ENSGAFG00000019460	scaf4a	56	71.676	ENSLAFG00000010710	SCAF4	52	62.745	Loxodonta_africana
ENSGAFG00000019460	scaf4a	61	70.985	ENSMAMG00000013223	scaf4a	52	77.528	Mastacembelus_armatus
ENSGAFG00000019460	scaf4a	94	75.326	ENSMZEG00005024349	scaf4a	65	81.216	Maylandia_zebra
ENSGAFG00000019460	scaf4a	55	77.358	ENSMOCG00000012087	Scaf4	54	64.822	Microtus_ochrogaster
ENSGAFG00000019460	scaf4a	58	79.181	ENSMALG00000013825	scaf4a	54	78.840	Monopterus_albus
ENSGAFG00000019460	scaf4a	55	75.000	MGP_PahariEiJ_G0016649	Scaf4	55	63.922	Mus_pahari
ENSGAFG00000019460	scaf4a	82	81.351	ENSONIG00000004687	scaf4a	72	76.463	Oreochromis_niloticus
ENSGAFG00000019460	scaf4a	85	77.734	ENSORLG00000004384	scaf4a	65	77.720	Oryzias_latipes
ENSGAFG00000019460	scaf4a	94	72.588	ENSORLG00020011857	scaf4a	65	75.623	Oryzias_latipes_hni
ENSGAFG00000019460	scaf4a	94	75.529	ENSORLG00015017880	scaf4a	66	77.982	Oryzias_latipes_hsok
ENSGAFG00000019460	scaf4a	85	76.953	ENSOMEG00000014482	scaf4a	63	77.868	Oryzias_melastigma
ENSGAFG00000019460	scaf4a	77	64.179	ENSPKIG00000022408	scaf4a	99	65.400	Paramormyrops_kingsleyae
ENSGAFG00000019460	scaf4a	78	66.548	ENSPMGG00000016741	scaf4a	50	68.182	Periophthalmus_magnuspinnatus
ENSGAFG00000019460	scaf4a	80	94.890	ENSPFOG00000017156	scaf4a	76	94.490	Poecilia_formosa
ENSGAFG00000019460	scaf4a	76	46.965	ENSPLAG00000004403	-	55	72.727	Poecilia_latipinna
ENSGAFG00000019460	scaf4a	92	96.107	ENSPLAG00000001972	scaf4a	99	96.107	Poecilia_latipinna
ENSGAFG00000019460	scaf4a	66	52.812	ENSPREG00000013510	scaf4b	58	60.541	Poecilia_reticulata
ENSGAFG00000019460	scaf4a	57	75.610	ENSPVAG00000005220	SCAF4	55	63.780	Pteropus_vampyrus
ENSGAFG00000019460	scaf4a	55	75.610	ENSRNOG00000002104	Scaf4	53	61.660	Rattus_norvegicus
ENSGAFG00000019460	scaf4a	77	49.501	ENSSMAG00000003738	scaf4b	81	48.286	Scophthalmus_maximus
ENSGAFG00000019460	scaf4a	87	72.396	ENSSMAG00000017901	scaf4a	63	76.178	Scophthalmus_maximus
ENSGAFG00000019460	scaf4a	83	80.764	ENSSDUG00000012918	scaf4a	64	81.477	Seriola_dumerili
ENSGAFG00000019460	scaf4a	83	80.978	ENSSLDG00000021671	scaf4a	64	81.696	Seriola_lalandi_dorsalis
ENSGAFG00000019460	scaf4a	77	47.391	ENSTRUG00000009536	-	55	76.978	Takifugu_rubripes