EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000019555 (Gene tree)
Gene ID: -
Gene Symbol: polr2j
Alias: rpb11|zgc:110005
Full Name: polymerase (RNA) II (DNA directed) polypeptide J
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 1638 bases
Position: chrNHOQ01002915.1:127343-128980
Accession: ZDB-GENE-050522-120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000028973	RNA_pol_L_2	PF13656.6	3.7e-29	1	1
ENSGAFP00000028973	RNA_pol_L	PF01193.24	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000029271	-	354	-	ENSGAFP00000028973	117 (aa)	-	UPI0000E3E8A7

Gene Model

Click here to download ENSGAFG00000019555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019555's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000019555	polr2j	89	33.645	ENSGAFG00000001693	polr1d	94	33.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019555	polr2j	100	94.872	ENSG00000005075	POLR2J	100	94.872	Homo_sapiens
ENSGAFG00000019555	polr2j	91	92.523	ENSG00000228049	POLR2J2	94	89.908	Homo_sapiens
ENSGAFG00000019555	polr2j	100	100.000	ENSAPOG00000019538	polr2j	100	100.000	Acanthochromis_polyacanthus
ENSGAFG00000019555	polr2j	100	87.402	ENSAMEG00000015480	-	100	87.402	Ailuropoda_melanoleuca
ENSGAFG00000019555	polr2j	93	77.273	ENSACIG00000014549	POLR2J2	91	77.273	Amphilophus_citrinellus
ENSGAFG00000019555	polr2j	100	99.145	ENSAOCG00000006937	polr2j	100	99.145	Amphiprion_ocellaris
ENSGAFG00000019555	polr2j	100	100.000	ENSAPEG00000021761	polr2j	100	100.000	Amphiprion_percula
ENSGAFG00000019555	polr2j	100	100.000	ENSATEG00000013312	-	100	100.000	Anabas_testudineus
ENSGAFG00000019555	polr2j	100	100.000	ENSATEG00000009731	polr2j	100	100.000	Anabas_testudineus
ENSGAFG00000019555	polr2j	86	92.079	ENSAPLG00000003744	-	100	92.079	Anas_platyrhynchos
ENSGAFG00000019555	polr2j	100	87.179	ENSACAG00000000251	POLR2J	100	87.179	Anolis_carolinensis
ENSGAFG00000019555	polr2j	100	100.000	ENSACLG00000014564	polr2j	100	100.000	Astatotilapia_calliptera
ENSGAFG00000019555	polr2j	100	97.436	ENSAMXG00000007517	polr2j	100	97.436	Astyanax_mexicanus
ENSGAFG00000019555	polr2j	62	63.014	ENSBTAG00000048046	-	61	63.014	Bos_taurus
ENSGAFG00000019555	polr2j	94	68.182	WBGene00012187	rpb-11	89	68.182	Caenorhabditis_elegans
ENSGAFG00000019555	polr2j	100	94.872	ENSCJAG00000016203	-	100	94.872	Callithrix_jacchus
ENSGAFG00000019555	polr2j	100	94.872	ENSCAFG00000013683	-	100	94.872	Canis_familiaris
ENSGAFG00000019555	polr2j	85	93.939	ENSTSYG00000029243	-	85	93.939	Carlito_syrichta
ENSGAFG00000019555	polr2j	100	94.872	ENSCPOG00000001401	-	100	94.872	Cavia_porcellus
ENSGAFG00000019555	polr2j	100	73.504	ENSCATG00000016595	-	97	85.870	Cercocebus_atys
ENSGAFG00000019555	polr2j	100	94.872	ENSCLAG00000005238	-	100	94.872	Chinchilla_lanigera
ENSGAFG00000019555	polr2j	100	94.872	ENSCSAG00000018092	-	100	94.872	Chlorocebus_sabaeus
ENSGAFG00000019555	polr2j	100	82.051	ENSCING00000020531	-	100	82.051	Ciona_intestinalis
ENSGAFG00000019555	polr2j	100	80.342	ENSCSAVG00000006948	-	100	80.342	Ciona_savignyi
ENSGAFG00000019555	polr2j	100	94.872	ENSCGRG00001012814	Polr2j	100	94.872	Cricetulus_griseus_chok1gshd
ENSGAFG00000019555	polr2j	100	80.342	ENSCGRG00000008433	Polr2j	100	80.342	Cricetulus_griseus_crigri
ENSGAFG00000019555	polr2j	100	97.436	ENSCSEG00000020352	polr2j	100	97.436	Cynoglossus_semilaevis
ENSGAFG00000019555	polr2j	100	99.145	ENSCVAG00000014267	polr2j	100	99.145	Cyprinodon_variegatus
ENSGAFG00000019555	polr2j	100	96.581	ENSDARG00000035146	polr2j	100	96.581	Danio_rerio
ENSGAFG00000019555	polr2j	100	94.872	ENSDORG00000005934	Polr2j	100	94.872	Dipodomys_ordii
ENSGAFG00000019555	polr2j	98	79.130	FBgn0032634	Rpb11	98	79.130	Drosophila_melanogaster
ENSGAFG00000019555	polr2j	100	64.957	ENSEBUG00000016100	polr2j	100	64.957	Eptatretus_burgeri
ENSGAFG00000019555	polr2j	100	94.872	ENSEASG00005016864	-	100	94.872	Equus_asinus_asinus
ENSGAFG00000019555	polr2j	100	97.436	ENSELUG00000012822	polr2j	100	97.436	Esox_lucius
ENSGAFG00000019555	polr2j	100	94.872	ENSFCAG00000000377	-	100	94.872	Felis_catus
ENSGAFG00000019555	polr2j	100	94.872	ENSFALG00000009523	POLR2J	100	94.872	Ficedula_albicollis
ENSGAFG00000019555	polr2j	100	94.872	ENSFDAG00000010507	-	100	94.872	Fukomys_damarensis
ENSGAFG00000019555	polr2j	100	100.000	ENSFHEG00000006625	polr2j	100	100.000	Fundulus_heteroclitus
ENSGAFG00000019555	polr2j	100	97.436	ENSGMOG00000018207	polr2j	100	97.436	Gadus_morhua
ENSGAFG00000019555	polr2j	100	94.872	ENSGALG00000030808	-	100	94.872	Gallus_gallus
ENSGAFG00000019555	polr2j	100	100.000	ENSGACG00000003310	polr2j	100	100.000	Gasterosteus_aculeatus
ENSGAFG00000019555	polr2j	97	84.956	ENSGAGG00000018304	-	96	84.956	Gopherus_agassizii
ENSGAFG00000019555	polr2j	85	89.000	ENSGGOG00000004519	-	80	89.000	Gorilla_gorilla
ENSGAFG00000019555	polr2j	100	100.000	ENSHBUG00000008467	polr2j	100	100.000	Haplochromis_burtoni
ENSGAFG00000019555	polr2j	100	94.872	ENSHGLG00000013598	POLR2J	100	94.872	Heterocephalus_glaber_female
ENSGAFG00000019555	polr2j	100	94.872	ENSHGLG00100011242	POLR2J	100	94.872	Heterocephalus_glaber_male
ENSGAFG00000019555	polr2j	100	97.436	ENSHCOG00000014827	polr2j	68	97.436	Hippocampus_comes
ENSGAFG00000019555	polr2j	100	97.436	ENSIPUG00000023960	polr2j	100	97.436	Ictalurus_punctatus
ENSGAFG00000019555	polr2j	100	94.872	ENSSTOG00000006377	POLR2J	100	94.872	Ictidomys_tridecemlineatus
ENSGAFG00000019555	polr2j	100	89.744	ENSJJAG00000018834	-	100	89.744	Jaculus_jaculus
ENSGAFG00000019555	polr2j	100	94.872	ENSJJAG00000013854	-	100	94.872	Jaculus_jaculus
ENSGAFG00000019555	polr2j	100	100.000	ENSKMAG00000014581	polr2j	79	100.000	Kryptolebias_marmoratus
ENSGAFG00000019555	polr2j	100	99.145	ENSLBEG00000005885	polr2j	100	99.145	Labrus_bergylta
ENSGAFG00000019555	polr2j	100	97.436	ENSLOCG00000001885	polr2j	89	97.436	Lepisosteus_oculatus
ENSGAFG00000019555	polr2j	100	94.872	ENSLAFG00000021507	-	100	94.872	Loxodonta_africana
ENSGAFG00000019555	polr2j	100	85.385	ENSMMUG00000012019	POLR2J	100	85.385	Macaca_mulatta
ENSGAFG00000019555	polr2j	100	99.145	ENSMAMG00000009374	polr2j	100	99.145	Mastacembelus_armatus
ENSGAFG00000019555	polr2j	100	100.000	ENSMZEG00005011932	polr2j	100	100.000	Maylandia_zebra
ENSGAFG00000019555	polr2j	100	94.872	ENSMGAG00000003534	POLR2J	100	94.872	Meleagris_gallopavo
ENSGAFG00000019555	polr2j	100	94.872	ENSMAUG00000013049	Polr2j	100	94.872	Mesocricetus_auratus
ENSGAFG00000019555	polr2j	80	89.362	ENSMICG00000026811	-	94	89.362	Microcebus_murinus
ENSGAFG00000019555	polr2j	100	94.872	ENSMOCG00000001294	Polr2j	100	94.872	Microtus_ochrogaster
ENSGAFG00000019555	polr2j	100	98.291	ENSMMOG00000013265	polr2j	100	98.291	Mola_mola
ENSGAFG00000019555	polr2j	100	86.719	ENSMODG00000013617	-	100	86.719	Monodelphis_domestica
ENSGAFG00000019555	polr2j	100	99.145	ENSMALG00000020749	polr2j	100	99.145	Monopterus_albus
ENSGAFG00000019555	polr2j	100	94.872	MGP_CAROLIEiJ_G0027851	Polr2j	100	94.872	Mus_caroli
ENSGAFG00000019555	polr2j	100	94.872	ENSMUSG00000039771	Polr2j	100	94.872	Mus_musculus
ENSGAFG00000019555	polr2j	100	94.872	MGP_PahariEiJ_G0024434	Polr2j	100	94.872	Mus_pahari
ENSGAFG00000019555	polr2j	100	94.872	MGP_SPRETEiJ_G0028853	Polr2j	100	94.872	Mus_spretus
ENSGAFG00000019555	polr2j	100	94.872	ENSMLUG00000010467	POLR2J	100	94.872	Myotis_lucifugus
ENSGAFG00000019555	polr2j	100	94.872	ENSNGAG00000023412	Polr2j	100	94.872	Nannospalax_galili
ENSGAFG00000019555	polr2j	66	97.403	ENSNBRG00000006580	polr2j	59	97.403	Neolamprologus_brichardi
ENSGAFG00000019555	polr2j	100	73.504	ENSODEG00000008559	-	100	73.504	Octodon_degus
ENSGAFG00000019555	polr2j	100	94.872	ENSODEG00000015648	-	100	94.872	Octodon_degus
ENSGAFG00000019555	polr2j	100	100.000	ENSONIG00000000259	polr2j	100	100.000	Oreochromis_niloticus
ENSGAFG00000019555	polr2j	100	92.308	ENSOANG00000020912	POLR2J	100	92.308	Ornithorhynchus_anatinus
ENSGAFG00000019555	polr2j	100	87.402	ENSOCUG00000023609	POLR2J	100	87.402	Oryctolagus_cuniculus
ENSGAFG00000019555	polr2j	100	100.000	ENSORLG00000029046	polr2j	83	100.000	Oryzias_latipes
ENSGAFG00000019555	polr2j	100	100.000	ENSORLG00020007625	polr2j	83	100.000	Oryzias_latipes_hni
ENSGAFG00000019555	polr2j	100	100.000	ENSORLG00015003457	polr2j	83	100.000	Oryzias_latipes_hsok
ENSGAFG00000019555	polr2j	100	99.145	ENSOMEG00000002097	polr2j	100	99.145	Oryzias_melastigma
ENSGAFG00000019555	polr2j	100	71.875	ENSOGAG00000008250	-	100	71.875	Otolemur_garnettii
ENSGAFG00000019555	polr2j	100	94.872	ENSOARG00000014204	-	98	94.872	Ovis_aries
ENSGAFG00000019555	polr2j	100	94.872	ENSPPRG00000012439	-	100	94.872	Panthera_pardus
ENSGAFG00000019555	polr2j	97	85.965	ENSPTIG00000018714	-	100	91.262	Panthera_tigris_altaica
ENSGAFG00000019555	polr2j	85	93.000	ENSPSIG00000010173	-	100	93.000	Pelodiscus_sinensis
ENSGAFG00000019555	polr2j	100	100.000	ENSPMGG00000021256	polr2j	100	100.000	Periophthalmus_magnuspinnatus
ENSGAFG00000019555	polr2j	100	94.872	ENSPEMG00000015733	Polr2j	100	94.872	Peromyscus_maniculatus_bairdii
ENSGAFG00000019555	polr2j	100	94.872	ENSPCIG00000009026	-	100	94.872	Phascolarctos_cinereus
ENSGAFG00000019555	polr2j	100	100.000	ENSPFOG00000012001	polr2j	99	100.000	Poecilia_formosa
ENSGAFG00000019555	polr2j	100	100.000	ENSPLAG00000014075	polr2j	100	100.000	Poecilia_latipinna
ENSGAFG00000019555	polr2j	100	100.000	ENSPMEG00000020585	polr2j	100	100.000	Poecilia_mexicana
ENSGAFG00000019555	polr2j	100	100.000	ENSPREG00000015255	polr2j	100	100.000	Poecilia_reticulata
ENSGAFG00000019555	polr2j	100	94.872	ENSPCOG00000024573	-	100	94.872	Propithecus_coquereli
ENSGAFG00000019555	polr2j	99	88.793	ENSPVAG00000017770	-	66	88.793	Pteropus_vampyrus
ENSGAFG00000019555	polr2j	100	100.000	ENSPNYG00000014832	polr2j	100	100.000	Pundamilia_nyererei
ENSGAFG00000019555	polr2j	100	94.872	ENSPNAG00000016595	polr2j	100	94.872	Pygocentrus_nattereri
ENSGAFG00000019555	polr2j	100	94.872	ENSRNOG00000001430	Polr2j	100	94.872	Rattus_norvegicus
ENSGAFG00000019555	polr2j	100	94.872	ENSSBOG00000025579	-	100	94.872	Saimiri_boliviensis_boliviensis
ENSGAFG00000019555	polr2j	59	98.551	ENSSHAG00000010443	-	81	98.551	Sarcophilus_harrisii
ENSGAFG00000019555	polr2j	93	95.413	ENSSFOG00015003371	polr2j	83	95.413	Scleropages_formosus
ENSGAFG00000019555	polr2j	100	100.000	ENSSMAG00000006729	polr2j	100	100.000	Scophthalmus_maximus
ENSGAFG00000019555	polr2j	100	100.000	ENSSDUG00000018490	polr2j	100	100.000	Seriola_dumerili
ENSGAFG00000019555	polr2j	100	100.000	ENSSLDG00000022354	polr2j	100	100.000	Seriola_lalandi_dorsalis
ENSGAFG00000019555	polr2j	100	94.872	ENSSPUG00000010802	-	100	94.872	Sphenodon_punctatus
ENSGAFG00000019555	polr2j	100	100.000	ENSSPAG00000021953	polr2j	100	100.000	Stegastes_partitus
ENSGAFG00000019555	polr2j	100	78.632	ENSSSCG00000003703	-	83	78.632	Sus_scrofa
ENSGAFG00000019555	polr2j	100	94.872	ENSSSCG00000007688	-	100	94.872	Sus_scrofa
ENSGAFG00000019555	polr2j	85	93.000	ENSTGUG00000004501	-	100	93.000	Taeniopygia_guttata
ENSGAFG00000019555	polr2j	59	98.551	ENSTGUG00000004510	-	100	98.551	Taeniopygia_guttata
ENSGAFG00000019555	polr2j	100	99.145	ENSTRUG00000020842	polr2j	100	99.145	Takifugu_rubripes
ENSGAFG00000019555	polr2j	100	98.291	ENSTNIG00000002994	polr2j	100	98.291	Tetraodon_nigroviridis
ENSGAFG00000019555	polr2j	91	79.439	ENSTBEG00000005797	-	70	79.439	Tupaia_belangeri
ENSGAFG00000019555	polr2j	100	94.872	ENSUAMG00000011310	-	100	94.872	Ursus_americanus
ENSGAFG00000019555	polr2j	100	94.872	ENSUMAG00000012594	-	100	94.872	Ursus_maritimus
ENSGAFG00000019555	polr2j	100	94.017	ENSXETG00000001108	polr2j	100	94.017	Xenopus_tropicalis
ENSGAFG00000019555	polr2j	100	100.000	ENSXMAG00000012422	polr2j	100	100.000	Xiphophorus_maculatus