EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000019558 (Gene tree)
Gene ID: -
Gene Symbol: snrpb
Alias: zgc:77315
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 3493 bases
Position: chrNHOQ01002915.1:143322-146814
Accession: ZDB-GENE-040426-1819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000028976	LSM	PF01423.22	2.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000029274	-	681	-	ENSGAFP00000028976	227 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019558's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019558	snrpb	72	94.012	ENSG00000125835	SNRPB	71	98.000	Homo_sapiens
ENSGAFG00000019558	snrpb	99	98.230	ENSAPOG00000019606	snrpb	77	98.230	Acanthochromis_polyacanthus
ENSGAFG00000019558	snrpb	73	94.083	ENSAMEG00000011353	SNRPB	72	93.103	Ailuropoda_melanoleuca
ENSGAFG00000019558	snrpb	96	98.190	ENSACIG00000014480	snrpb	98	98.190	Amphilophus_citrinellus
ENSGAFG00000019558	snrpb	99	98.230	ENSAOCG00000006876	snrpb	94	98.230	Amphiprion_ocellaris
ENSGAFG00000019558	snrpb	99	98.230	ENSAPEG00000021585	snrpb	97	98.230	Amphiprion_percula
ENSGAFG00000019558	snrpb	99	97.345	ENSATEG00000009836	snrpb	94	97.345	Anabas_testudineus
ENSGAFG00000019558	snrpb	69	95.000	ENSACAG00000002053	SNRPB	71	93.333	Anolis_carolinensis
ENSGAFG00000019558	snrpb	72	94.012	ENSANAG00000024443	-	74	93.023	Aotus_nancymaae
ENSGAFG00000019558	snrpb	72	86.826	ENSANAG00000036271	-	69	84.884	Aotus_nancymaae
ENSGAFG00000019558	snrpb	99	98.230	ENSACLG00000014707	snrpb	94	98.230	Astatotilapia_calliptera
ENSGAFG00000019558	snrpb	72	98.788	ENSAMXG00000029434	snrpb	71	98.817	Astyanax_mexicanus
ENSGAFG00000019558	snrpb	72	94.012	ENSBTAG00000001038	SNRPB	74	92.982	Bos_taurus
ENSGAFG00000019558	snrpb	93	82.326	ENSCJAG00000023097	-	71	85.965	Callithrix_jacchus
ENSGAFG00000019558	snrpb	72	94.012	ENSCJAG00000020971	-	74	93.023	Callithrix_jacchus
ENSGAFG00000019558	snrpb	63	82.993	ENSCAFG00000031109	-	73	78.857	Canis_familiaris
ENSGAFG00000019558	snrpb	72	94.012	ENSCAFG00000006693	-	74	93.023	Canis_familiaris
ENSGAFG00000019558	snrpb	72	94.012	ENSCAFG00020016981	-	72	93.023	Canis_lupus_dingo
ENSGAFG00000019558	snrpb	72	94.012	ENSCHIG00000025449	-	74	92.982	Capra_hircus
ENSGAFG00000019558	snrpb	73	93.491	ENSTSYG00000014498	-	74	93.023	Carlito_syrichta
ENSGAFG00000019558	snrpb	77	74.138	ENSTSYG00000032303	-	61	72.781	Carlito_syrichta
ENSGAFG00000019558	snrpb	73	93.491	ENSCAPG00000012669	SNRPB	75	93.023	Cavia_aperea
ENSGAFG00000019558	snrpb	72	94.012	ENSCPOG00000039408	SNRPB	74	93.023	Cavia_porcellus
ENSGAFG00000019558	snrpb	56	82.677	ENSCCAG00000035140	-	88	84.000	Cebus_capucinus
ENSGAFG00000019558	snrpb	72	94.012	ENSCCAG00000026002	SNRPB	74	93.023	Cebus_capucinus
ENSGAFG00000019558	snrpb	73	93.452	ENSCATG00000030230	SNRPB	74	93.023	Cercocebus_atys
ENSGAFG00000019558	snrpb	72	94.012	ENSCLAG00000012442	SNRPB	73	93.023	Chinchilla_lanigera
ENSGAFG00000019558	snrpb	72	94.012	ENSCSAG00000010840	SNRPB	74	93.023	Chlorocebus_sabaeus
ENSGAFG00000019558	snrpb	72	95.808	ENSCPBG00000026801	SNRPB	75	94.186	Chrysemys_picta_bellii
ENSGAFG00000019558	snrpb	72	94.012	ENSCANG00000019461	SNRPB	74	93.023	Colobus_angolensis_palliatus
ENSGAFG00000019558	snrpb	72	94.012	ENSCGRG00001023046	Snrpb	74	93.023	Cricetulus_griseus_chok1gshd
ENSGAFG00000019558	snrpb	70	93.865	ENSCGRG00000010423	Snrpb	73	92.727	Cricetulus_griseus_crigri
ENSGAFG00000019558	snrpb	99	96.460	ENSCSEG00000020328	snrpb	94	96.460	Cynoglossus_semilaevis
ENSGAFG00000019558	snrpb	72	98.182	ENSDARG00000011125	snrpb	71	98.235	Danio_rerio
ENSGAFG00000019558	snrpb	72	94.012	ENSDNOG00000015545	-	72	93.023	Dasypus_novemcinctus
ENSGAFG00000019558	snrpb	73	88.166	ENSDNOG00000007896	-	72	87.356	Dasypus_novemcinctus
ENSGAFG00000019558	snrpb	70	93.827	ENSDORG00000029558	Snrpb	72	92.771	Dipodomys_ordii
ENSGAFG00000019558	snrpb	68	67.308	FBgn0262601	SmB	73	68.919	Drosophila_melanogaster
ENSGAFG00000019558	snrpb	72	73.054	ENSETEG00000006830	SNRPB	75	71.345	Echinops_telfairi
ENSGAFG00000019558	snrpb	76	81.250	ENSEBUG00000007467	SNRPB	62	87.838	Eptatretus_burgeri
ENSGAFG00000019558	snrpb	72	93.413	ENSEASG00005012991	SNRPB	74	92.442	Equus_asinus_asinus
ENSGAFG00000019558	snrpb	72	94.012	ENSECAG00000011944	SNRPB	74	93.023	Equus_caballus
ENSGAFG00000019558	snrpb	72	94.012	ENSEEUG00000015568	SNRPB	61	93.023	Erinaceus_europaeus
ENSGAFG00000019558	snrpb	99	96.018	ENSELUG00000014564	snrpb	97	95.928	Esox_lucius
ENSGAFG00000019558	snrpb	72	94.012	ENSFCAG00000034090	-	74	93.023	Felis_catus
ENSGAFG00000019558	snrpb	69	95.625	ENSFALG00000004866	SNRPB	71	93.939	Ficedula_albicollis
ENSGAFG00000019558	snrpb	73	93.452	ENSFDAG00000009937	SNRPB	74	93.023	Fukomys_damarensis
ENSGAFG00000019558	snrpb	72	95.808	ENSGALG00000035421	SNRPN	72	94.186	Gallus_gallus
ENSGAFG00000019558	snrpb	99	96.460	ENSGACG00000003262	snrpb	94	96.460	Gasterosteus_aculeatus
ENSGAFG00000019558	snrpb	72	95.808	ENSGAGG00000001308	SNRPB	72	94.186	Gopherus_agassizii
ENSGAFG00000019558	snrpb	72	94.012	ENSGGOG00000016138	SNRPB	74	93.023	Gorilla_gorilla
ENSGAFG00000019558	snrpb	99	98.230	ENSHBUG00000008369	snrpb	94	98.230	Haplochromis_burtoni
ENSGAFG00000019558	snrpb	65	85.811	ENSHGLG00000016505	-	81	81.657	Heterocephalus_glaber_female
ENSGAFG00000019558	snrpb	72	94.012	ENSHGLG00000016241	-	74	93.023	Heterocephalus_glaber_female
ENSGAFG00000019558	snrpb	72	94.012	ENSHGLG00100012877	-	74	93.023	Heterocephalus_glaber_male
ENSGAFG00000019558	snrpb	65	85.811	ENSHGLG00100004178	-	81	81.657	Heterocephalus_glaber_male
ENSGAFG00000019558	snrpb	99	97.345	ENSHCOG00000014888	snrpb	94	97.345	Hippocampus_comes
ENSGAFG00000019558	snrpb	72	98.182	ENSIPUG00000024569	SNRPB	71	98.235	Ictalurus_punctatus
ENSGAFG00000019558	snrpb	94	69.159	ENSSTOG00000027821	-	62	94.118	Ictidomys_tridecemlineatus
ENSGAFG00000019558	snrpb	72	92.216	ENSSTOG00000033664	-	72	91.279	Ictidomys_tridecemlineatus
ENSGAFG00000019558	snrpb	72	94.012	ENSJJAG00000024170	Snrpb	74	93.023	Jaculus_jaculus
ENSGAFG00000019558	snrpb	99	98.673	ENSKMAG00000014494	snrpb	93	98.673	Kryptolebias_marmoratus
ENSGAFG00000019558	snrpb	99	97.345	ENSLBEG00000005678	snrpb	94	97.345	Labrus_bergylta
ENSGAFG00000019558	snrpb	78	92.857	ENSLACG00000011459	SNRPB	72	93.605	Latimeria_chalumnae
ENSGAFG00000019558	snrpb	72	98.788	ENSLOCG00000002687	snrpb	71	98.824	Lepisosteus_oculatus
ENSGAFG00000019558	snrpb	73	89.881	ENSLAFG00000017588	SNRPB	74	88.953	Loxodonta_africana
ENSGAFG00000019558	snrpb	72	94.012	ENSMFAG00000038756	SNRPB	74	93.023	Macaca_fascicularis
ENSGAFG00000019558	snrpb	72	94.012	ENSMMUG00000010050	SNRPB	74	93.023	Macaca_mulatta
ENSGAFG00000019558	snrpb	72	94.012	ENSMNEG00000027954	SNRPB	74	93.023	Macaca_nemestrina
ENSGAFG00000019558	snrpb	72	94.012	ENSMLEG00000022346	SNRPB	74	93.023	Mandrillus_leucophaeus
ENSGAFG00000019558	snrpb	99	97.807	ENSMAMG00000009294	snrpb	93	97.807	Mastacembelus_armatus
ENSGAFG00000019558	snrpb	99	98.230	ENSMZEG00005011856	snrpb	94	98.230	Maylandia_zebra
ENSGAFG00000019558	snrpb	72	94.012	ENSMICG00000016519	SNRPB	74	92.982	Microcebus_murinus
ENSGAFG00000019558	snrpb	78	82.778	ENSMICG00000015983	-	78	83.041	Microcebus_murinus
ENSGAFG00000019558	snrpb	72	93.413	ENSMOCG00000002892	-	74	92.442	Microtus_ochrogaster
ENSGAFG00000019558	snrpb	60	77.536	ENSMOCG00000021362	-	71	74.118	Microtus_ochrogaster
ENSGAFG00000019558	snrpb	99	97.368	ENSMMOG00000013226	snrpb	97	97.368	Mola_mola
ENSGAFG00000019558	snrpb	99	97.345	ENSMALG00000020839	snrpb	76	97.345	Monopterus_albus
ENSGAFG00000019558	snrpb	72	94.012	MGP_CAROLIEiJ_G0024293	Snrpb	71	98.000	Mus_caroli
ENSGAFG00000019558	snrpb	72	94.012	ENSMUSG00000027404	Snrpb	71	98.000	Mus_musculus
ENSGAFG00000019558	snrpb	72	94.012	MGP_PahariEiJ_G0025738	Snrpb	71	98.000	Mus_pahari
ENSGAFG00000019558	snrpb	72	94.012	MGP_SPRETEiJ_G0025213	Snrpb	70	98.000	Mus_spretus
ENSGAFG00000019558	snrpb	72	94.012	ENSMPUG00000009283	SNRPB	74	93.023	Mustela_putorius_furo
ENSGAFG00000019558	snrpb	72	90.419	ENSMLUG00000016951	SNRPB	71	89.474	Myotis_lucifugus
ENSGAFG00000019558	snrpb	72	94.012	ENSNGAG00000012051	Snrpb	74	93.023	Nannospalax_galili
ENSGAFG00000019558	snrpb	97	97.309	ENSNBRG00000006353	snrpb	85	97.309	Neolamprologus_brichardi
ENSGAFG00000019558	snrpb	73	93.452	ENSNLEG00000029067	SNRPB	73	92.486	Nomascus_leucogenys
ENSGAFG00000019558	snrpb	72	94.012	ENSMEUG00000015625	SNRPB	76	93.023	Notamacropus_eugenii
ENSGAFG00000019558	snrpb	72	94.012	ENSODEG00000004305	-	74	93.023	Octodon_degus
ENSGAFG00000019558	snrpb	72	88.623	ENSODEG00000016060	-	72	87.791	Octodon_degus
ENSGAFG00000019558	snrpb	99	98.230	ENSONIG00000000248	snrpb	94	98.230	Oreochromis_niloticus
ENSGAFG00000019558	snrpb	93	61.860	ENSOCUG00000026813	-	64	66.443	Oryctolagus_cuniculus
ENSGAFG00000019558	snrpb	78	86.813	ENSOCUG00000022423	-	87	88.235	Oryctolagus_cuniculus
ENSGAFG00000019558	snrpb	72	91.617	ENSOCUG00000028215	-	71	90.643	Oryctolagus_cuniculus
ENSGAFG00000019558	snrpb	93	84.722	ENSOCUG00000021456	-	71	89.412	Oryctolagus_cuniculus
ENSGAFG00000019558	snrpb	72	94.012	ENSOCUG00000014042	-	71	92.982	Oryctolagus_cuniculus
ENSGAFG00000019558	snrpb	99	98.230	ENSORLG00000021862	snrpb	94	98.230	Oryzias_latipes
ENSGAFG00000019558	snrpb	72	94.012	ENSOGAG00000016149	SNRPB	72	93.023	Otolemur_garnettii
ENSGAFG00000019558	snrpb	72	94.012	ENSOARG00000006740	SNRPB	74	92.982	Ovis_aries
ENSGAFG00000019558	snrpb	72	94.012	ENSPPAG00000036314	SNRPB	74	93.023	Pan_paniscus
ENSGAFG00000019558	snrpb	72	94.012	ENSPPRG00000003233	-	74	93.023	Panthera_pardus
ENSGAFG00000019558	snrpb	72	94.012	ENSPTIG00000007468	SNRPB	74	93.023	Panthera_tigris_altaica
ENSGAFG00000019558	snrpb	72	94.012	ENSPTRG00000013176	SNRPB	74	93.023	Pan_troglodytes
ENSGAFG00000019558	snrpb	73	94.083	ENSPANG00000020362	SNRPB	72	93.023	Papio_anubis
ENSGAFG00000019558	snrpb	72	97.576	ENSPKIG00000002865	snrpb	71	97.059	Paramormyrops_kingsleyae
ENSGAFG00000019558	snrpb	74	95.294	ENSPSIG00000014125	SNRPB	72	93.714	Pelodiscus_sinensis
ENSGAFG00000019558	snrpb	82	95.722	ENSPMGG00000016349	snrpb	80	95.722	Periophthalmus_magnuspinnatus
ENSGAFG00000019558	snrpb	72	94.012	ENSPEMG00000007948	Snrpb	74	93.023	Peromyscus_maniculatus_bairdii
ENSGAFG00000019558	snrpb	73	92.308	ENSPCIG00000004694	SNRPB	72	91.379	Phascolarctos_cinereus
ENSGAFG00000019558	snrpb	66	99.333	ENSPFOG00000011802	snrpb	64	99.333	Poecilia_formosa
ENSGAFG00000019558	snrpb	93	70.183	ENSPLAG00000014130	snrpb	59	99.259	Poecilia_latipinna
ENSGAFG00000019558	snrpb	59	99.259	ENSPREG00000015515	snrpb	62	99.259	Poecilia_reticulata
ENSGAFG00000019558	snrpb	72	94.012	ENSPPYG00000010841	SNRPB	74	93.023	Pongo_abelii
ENSGAFG00000019558	snrpb	72	94.012	ENSPCOG00000013686	SNRPB	74	93.023	Propithecus_coquereli
ENSGAFG00000019558	snrpb	72	92.814	ENSPVAG00000017013	SNRPB	60	91.860	Pteropus_vampyrus
ENSGAFG00000019558	snrpb	99	98.230	ENSPNYG00000014788	snrpb	94	98.230	Pundamilia_nyererei
ENSGAFG00000019558	snrpb	72	98.182	ENSPNAG00000016126	snrpb	71	98.225	Pygocentrus_nattereri
ENSGAFG00000019558	snrpb	72	94.012	ENSRNOG00000006961	Snrpb	70	98.000	Rattus_norvegicus
ENSGAFG00000019558	snrpb	72	94.012	ENSRBIG00000040505	SNRPB	75	93.023	Rhinopithecus_bieti
ENSGAFG00000019558	snrpb	72	94.012	ENSRROG00000036094	SNRPB	74	93.023	Rhinopithecus_roxellana
ENSGAFG00000019558	snrpb	72	94.012	ENSSBOG00000027310	SNRPB	74	93.023	Saimiri_boliviensis_boliviensis
ENSGAFG00000019558	snrpb	72	94.611	ENSSHAG00000010394	SNRPB	72	93.605	Sarcophilus_harrisii
ENSGAFG00000019558	snrpb	73	97.006	ENSSFOG00015002870	snrpb	72	97.059	Scleropages_formosus
ENSGAFG00000019558	snrpb	99	96.903	ENSSMAG00000006766	snrpb	94	96.903	Scophthalmus_maximus
ENSGAFG00000019558	snrpb	99	98.230	ENSSDUG00000018539	snrpb	94	98.230	Seriola_dumerili
ENSGAFG00000019558	snrpb	99	98.230	ENSSLDG00000022391	snrpb	94	98.230	Seriola_lalandi_dorsalis
ENSGAFG00000019558	snrpb	72	78.443	ENSSARG00000003084	SNRPB	74	77.907	Sorex_araneus
ENSGAFG00000019558	snrpb	72	95.808	ENSSPUG00000015659	SNRPB	72	94.186	Sphenodon_punctatus
ENSGAFG00000019558	snrpb	99	98.230	ENSSPAG00000021992	snrpb	94	98.230	Stegastes_partitus
ENSGAFG00000019558	snrpb	72	74.096	ENSSSCG00000011966	-	71	70.000	Sus_scrofa
ENSGAFG00000019558	snrpb	73	94.083	ENSSSCG00000040857	-	74	92.982	Sus_scrofa
ENSGAFG00000019558	snrpb	74	82.941	ENSTGUG00000005684	SNRPB	59	96.429	Taeniopygia_guttata
ENSGAFG00000019558	snrpb	99	96.903	ENSTRUG00000023094	snrpb	98	96.903	Takifugu_rubripes
ENSGAFG00000019558	snrpb	99	96.903	ENSTNIG00000002991	snrpb	94	96.903	Tetraodon_nigroviridis
ENSGAFG00000019558	snrpb	72	94.012	ENSUAMG00000005984	-	82	91.860	Ursus_americanus
ENSGAFG00000019558	snrpb	60	94.161	ENSUMAG00000002123	-	63	94.161	Ursus_maritimus
ENSGAFG00000019558	snrpb	97	72.807	ENSVVUG00000010086	-	73	75.000	Vulpes_vulpes
ENSGAFG00000019558	snrpb	72	93.413	ENSVVUG00000025654	-	72	92.442	Vulpes_vulpes
ENSGAFG00000019558	snrpb	65	97.315	ENSXETG00000027266	snrpb	73	93.023	Xenopus_tropicalis
ENSGAFG00000019558	snrpb	63	94.444	ENSXMAG00000028767	snrpb	58	99.259	Xiphophorus_maculatus