EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000019577 (Gene tree)
Gene ID: -
Gene Symbol: slbp
Alias: cb157|sb:cb157|si:dkey-102m7.2
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 7790 bases
Position: chrNHOQ01000168.1:64736-72525
Accession: ZDB-GENE-030131-9686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000029004	SLBP_RNA_bind	PF15247.6	2e-29	1	1
ENSGAFP00000029003	SLBP_RNA_bind	PF15247.6	2.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000029302	-	1494	-	ENSGAFP00000029003	270 (aa)	-	-
ENSGAFT00000029303	-	2936	-	ENSGAFP00000029004	256 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019577's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019577	slbp	89	52.459	ENSG00000163950	SLBP	81	54.673	Homo_sapiens
ENSGAFG00000019577	slbp	100	73.145	ENSAPOG00000004953	slbp	100	73.145	Acanthochromis_polyacanthus
ENSGAFG00000019577	slbp	57	66.225	ENSAMEG00000016915	SLBP	88	55.399	Ailuropoda_melanoleuca
ENSGAFG00000019577	slbp	93	73.256	ENSACIG00000022308	slbp	97	73.256	Amphilophus_citrinellus
ENSGAFG00000019577	slbp	100	71.805	ENSAOCG00000024545	slbp	100	71.731	Amphiprion_ocellaris
ENSGAFG00000019577	slbp	100	71.805	ENSAPEG00000017629	slbp	100	71.731	Amphiprion_percula
ENSGAFG00000019577	slbp	100	74.906	ENSATEG00000016358	slbp	97	75.725	Anabas_testudineus
ENSGAFG00000019577	slbp	76	49.761	ENSAPLG00000015989	-	88	52.632	Anas_platyrhynchos
ENSGAFG00000019577	slbp	88	50.400	ENSANAG00000034769	SLBP	81	54.673	Aotus_nancymaae
ENSGAFG00000019577	slbp	95	72.119	ENSACLG00000007036	-	96	72.119	Astatotilapia_calliptera
ENSGAFG00000019577	slbp	99	56.767	ENSAMXG00000014527	slbp	98	55.000	Astyanax_mexicanus
ENSGAFG00000019577	slbp	85	53.333	ENSBTAG00000001328	SLBP	90	49.270	Bos_taurus
ENSGAFG00000019577	slbp	88	51.029	ENSCJAG00000001790	SLBP	82	49.407	Callithrix_jacchus
ENSGAFG00000019577	slbp	76	56.500	ENSCAFG00000015016	SLBP	82	52.016	Canis_familiaris
ENSGAFG00000019577	slbp	76	56.500	ENSCAFG00020012334	SLBP	82	52.016	Canis_lupus_dingo
ENSGAFG00000019577	slbp	85	54.054	ENSCHIG00000019364	SLBP	90	49.815	Capra_hircus
ENSGAFG00000019577	slbp	89	52.869	ENSTSYG00000000376	SLBP	81	53.738	Carlito_syrichta
ENSGAFG00000019577	slbp	52	57.664	ENSCAPG00000016340	SLBP	85	52.571	Cavia_aperea
ENSGAFG00000019577	slbp	80	52.252	ENSCPOG00000000031	SLBP	81	51.220	Cavia_porcellus
ENSGAFG00000019577	slbp	89	52.459	ENSCATG00000029173	SLBP	81	54.673	Cercocebus_atys
ENSGAFG00000019577	slbp	61	63.354	ENSCLAG00000008157	SLBP	83	51.822	Chinchilla_lanigera
ENSGAFG00000019577	slbp	68	48.315	ENSCSAG00000015628	SLBP	61	48.066	Chlorocebus_sabaeus
ENSGAFG00000019577	slbp	89	52.632	ENSCPBG00000000746	SLBP	82	52.632	Chrysemys_picta_bellii
ENSGAFG00000019577	slbp	76	55.288	ENSCANG00000041008	SLBP	87	54.502	Colobus_angolensis_palliatus
ENSGAFG00000019577	slbp	85	54.505	ENSCGRG00001009760	-	85	51.538	Cricetulus_griseus_chok1gshd
ENSGAFG00000019577	slbp	80	54.762	ENSCGRG00001012991	-	86	50.391	Cricetulus_griseus_chok1gshd
ENSGAFG00000019577	slbp	85	54.505	ENSCGRG00000004506	Slbp	85	51.538	Cricetulus_griseus_crigri
ENSGAFG00000019577	slbp	97	71.032	ENSCSEG00000020337	-	98	69.888	Cynoglossus_semilaevis
ENSGAFG00000019577	slbp	100	78.102	ENSCVAG00000019592	-	100	78.467	Cyprinodon_variegatus
ENSGAFG00000019577	slbp	96	55.762	ENSDARG00000100558	slbp	87	56.506	Danio_rerio
ENSGAFG00000019577	slbp	76	56.039	ENSDNOG00000047539	SLBP	84	50.781	Dasypus_novemcinctus
ENSGAFG00000019577	slbp	57	61.074	ENSDORG00000003028	Slbp	90	64.052	Dipodomys_ordii
ENSGAFG00000019577	slbp	72	55.497	ENSETEG00000004641	SLBP	94	51.240	Echinops_telfairi
ENSGAFG00000019577	slbp	54	58.865	ENSEASG00005022714	SLBP	86	52.973	Equus_asinus_asinus
ENSGAFG00000019577	slbp	80	56.459	ENSECAG00000011689	SLBP	67	56.132	Equus_caballus
ENSGAFG00000019577	slbp	100	57.836	ENSELUG00000012854	slbp	96	57.818	Esox_lucius
ENSGAFG00000019577	slbp	76	54.040	ENSFCAG00000000169	SLBP	88	51.452	Felis_catus
ENSGAFG00000019577	slbp	89	50.403	ENSFALG00000010003	-	84	50.403	Ficedula_albicollis
ENSGAFG00000019577	slbp	72	60.000	ENSFDAG00000007592	SLBP	89	52.000	Fukomys_damarensis
ENSGAFG00000019577	slbp	100	81.919	ENSFHEG00000007497	slbp	100	80.443	Fundulus_heteroclitus
ENSGAFG00000019577	slbp	60	73.248	ENSGMOG00000015352	slbp	100	72.500	Gadus_morhua
ENSGAFG00000019577	slbp	97	49.446	ENSGALG00000015712	SLBP	90	49.446	Gallus_gallus
ENSGAFG00000019577	slbp	92	66.667	ENSGACG00000019596	slbp	93	66.667	Gasterosteus_aculeatus
ENSGAFG00000019577	slbp	78	57.692	ENSGAGG00000012096	SLBP	83	57.692	Gopherus_agassizii
ENSGAFG00000019577	slbp	89	52.459	ENSGGOG00000003167	SLBP	81	54.673	Gorilla_gorilla
ENSGAFG00000019577	slbp	95	72.491	ENSHBUG00000003338	-	96	72.491	Haplochromis_burtoni
ENSGAFG00000019577	slbp	68	51.705	ENSHGLG00000008313	-	84	44.355	Heterocephalus_glaber_female
ENSGAFG00000019577	slbp	63	55.357	ENSHGLG00000010461	-	84	46.667	Heterocephalus_glaber_female
ENSGAFG00000019577	slbp	63	55.357	ENSHGLG00100014906	-	84	46.667	Heterocephalus_glaber_male
ENSGAFG00000019577	slbp	68	52.841	ENSHGLG00100010510	-	84	45.161	Heterocephalus_glaber_male
ENSGAFG00000019577	slbp	71	61.497	ENSHGLG00100014018	-	90	62.234	Heterocephalus_glaber_male
ENSGAFG00000019577	slbp	100	68.872	ENSHCOG00000013425	slbp	97	69.173	Hippocampus_comes
ENSGAFG00000019577	slbp	79	60.287	ENSIPUG00000016780	slbp	91	55.285	Ictalurus_punctatus
ENSGAFG00000019577	slbp	77	57.711	ENSSTOG00000003262	SLBP	83	52.400	Ictidomys_tridecemlineatus
ENSGAFG00000019577	slbp	80	56.459	ENSJJAG00000002394	-	77	54.955	Jaculus_jaculus
ENSGAFG00000019577	slbp	89	47.826	ENSJJAG00000020549	-	82	53.036	Jaculus_jaculus
ENSGAFG00000019577	slbp	100	75.269	ENSKMAG00000008187	slbp	99	75.269	Kryptolebias_marmoratus
ENSGAFG00000019577	slbp	100	69.732	ENSLBEG00000024709	slbp	97	70.632	Labrus_bergylta
ENSGAFG00000019577	slbp	91	49.615	ENSLACG00000014623	SLBP	86	51.587	Latimeria_chalumnae
ENSGAFG00000019577	slbp	94	58.824	ENSLOCG00000011027	slbp	89	58.824	Lepisosteus_oculatus
ENSGAFG00000019577	slbp	79	57.488	ENSLAFG00000012933	SLBP	83	56.604	Loxodonta_africana
ENSGAFG00000019577	slbp	88	52.263	ENSMFAG00000030130	SLBP	74	50.777	Macaca_fascicularis
ENSGAFG00000019577	slbp	89	50.996	ENSMMUG00000032303	SLBP	84	55.189	Macaca_mulatta
ENSGAFG00000019577	slbp	54	51.678	ENSMNEG00000008082	SLBP	64	51.316	Macaca_nemestrina
ENSGAFG00000019577	slbp	86	51.271	ENSMLEG00000024639	SLBP	76	55.189	Mandrillus_leucophaeus
ENSGAFG00000019577	slbp	98	67.754	ENSMAMG00000001046	-	97	67.754	Mastacembelus_armatus
ENSGAFG00000019577	slbp	95	72.491	ENSMZEG00005017261	-	96	72.491	Maylandia_zebra
ENSGAFG00000019577	slbp	76	52.657	ENSMGAG00000013085	SLBP	87	53.140	Meleagris_gallopavo
ENSGAFG00000019577	slbp	84	54.751	ENSMAUG00000009490	Slbp	85	51.737	Mesocricetus_auratus
ENSGAFG00000019577	slbp	81	53.604	ENSMICG00000014244	SLBP	81	54.206	Microcebus_murinus
ENSGAFG00000019577	slbp	80	55.450	ENSMOCG00000015826	Slbp	85	60.317	Microtus_ochrogaster
ENSGAFG00000019577	slbp	91	64.919	ENSMMOG00000010181	slbp	79	79.459	Mola_mola
ENSGAFG00000019577	slbp	76	57.767	ENSMODG00000004304	SLBP	88	52.549	Monodelphis_domestica
ENSGAFG00000019577	slbp	100	71.536	ENSMALG00000013883	-	74	71.479	Monopterus_albus
ENSGAFG00000019577	slbp	80	55.924	MGP_CAROLIEiJ_G0027117	Slbp	82	60.847	Mus_caroli
ENSGAFG00000019577	slbp	80	55.924	ENSMUSG00000004642	Slbp	83	60.847	Mus_musculus
ENSGAFG00000019577	slbp	80	55.924	MGP_PahariEiJ_G0016901	Slbp	82	60.847	Mus_pahari
ENSGAFG00000019577	slbp	80	55.924	MGP_SPRETEiJ_G0028113	Slbp	83	60.847	Mus_spretus
ENSGAFG00000019577	slbp	62	52.247	ENSMPUG00000011139	SLBP	79	55.429	Mustela_putorius_furo
ENSGAFG00000019577	slbp	58	61.184	ENSMLUG00000004425	SLBP	64	56.954	Myotis_lucifugus
ENSGAFG00000019577	slbp	80	54.976	ENSNGAG00000020799	Slbp	82	52.033	Nannospalax_galili
ENSGAFG00000019577	slbp	93	72.619	ENSNBRG00000006044	-	95	72.619	Neolamprologus_brichardi
ENSGAFG00000019577	slbp	89	50.996	ENSNLEG00000000048	SLBP	81	54.673	Nomascus_leucogenys
ENSGAFG00000019577	slbp	56	67.123	ENSMEUG00000002501	SLBP	91	59.322	Notamacropus_eugenii
ENSGAFG00000019577	slbp	61	64.596	ENSODEG00000012641	SLBP	84	52.632	Octodon_degus
ENSGAFG00000019577	slbp	93	72.519	ENSONIG00000017469	-	94	72.519	Oreochromis_niloticus
ENSGAFG00000019577	slbp	76	56.311	ENSOANG00000014243	SLBP	83	56.311	Ornithorhynchus_anatinus
ENSGAFG00000019577	slbp	100	67.442	ENSORLG00000024887	-	96	66.792	Oryzias_latipes
ENSGAFG00000019577	slbp	100	66.406	ENSORLG00020007798	slbp	96	65.779	Oryzias_latipes_hni
ENSGAFG00000019577	slbp	100	66.537	ENSORLG00015016656	slbp	96	65.909	Oryzias_latipes_hsok
ENSGAFG00000019577	slbp	97	64.773	ENSOMEG00000010818	slbp	96	65.530	Oryzias_melastigma
ENSGAFG00000019577	slbp	89	53.689	ENSOGAG00000009750	SLBP	81	53.441	Otolemur_garnettii
ENSGAFG00000019577	slbp	63	61.585	ENSOARG00000016090	SLBP	88	54.460	Ovis_aries
ENSGAFG00000019577	slbp	89	52.459	ENSPPAG00000033300	SLBP	81	54.673	Pan_paniscus
ENSGAFG00000019577	slbp	64	56.548	ENSPPRG00000016897	SLBP	89	52.033	Panthera_pardus
ENSGAFG00000019577	slbp	52	61.029	ENSPTIG00000015057	SLBP	86	53.514	Panthera_tigris_altaica
ENSGAFG00000019577	slbp	88	52.263	ENSPTRG00000015832	SLBP	81	54.673	Pan_troglodytes
ENSGAFG00000019577	slbp	89	50.199	ENSPANG00000004932	SLBP	81	54.673	Papio_anubis
ENSGAFG00000019577	slbp	91	59.766	ENSPKIG00000006183	slbp	93	58.029	Paramormyrops_kingsleyae
ENSGAFG00000019577	slbp	86	65.929	ENSPMGG00000017684	-	99	65.990	Periophthalmus_magnuspinnatus
ENSGAFG00000019577	slbp	80	55.450	ENSPEMG00000018369	Slbp	82	52.209	Peromyscus_maniculatus_bairdii
ENSGAFG00000019577	slbp	76	55.607	ENSPCIG00000013575	SLBP	70	50.951	Phascolarctos_cinereus
ENSGAFG00000019577	slbp	100	97.407	ENSPFOG00000000462	slbp	100	97.407	Poecilia_formosa
ENSGAFG00000019577	slbp	100	96.667	ENSPLAG00000008300	slbp	100	96.667	Poecilia_latipinna
ENSGAFG00000019577	slbp	100	97.407	ENSPMEG00000020807	slbp	100	97.407	Poecilia_mexicana
ENSGAFG00000019577	slbp	100	97.778	ENSPREG00000004561	slbp	100	97.778	Poecilia_reticulata
ENSGAFG00000019577	slbp	89	52.459	ENSPPYG00000014529	SLBP	81	52.227	Pongo_abelii
ENSGAFG00000019577	slbp	92	52.756	ENSPCOG00000017399	SLBP	84	52.529	Propithecus_coquereli
ENSGAFG00000019577	slbp	97	48.689	ENSPVAG00000002807	SLBP	90	48.519	Pteropus_vampyrus
ENSGAFG00000019577	slbp	95	72.491	ENSPNYG00000005451	-	96	72.491	Pundamilia_nyererei
ENSGAFG00000019577	slbp	100	54.064	ENSPNAG00000018503	slbp	100	54.417	Pygocentrus_nattereri
ENSGAFG00000019577	slbp	80	55.924	ENSRNOG00000037162	Slbp	82	52.610	Rattus_norvegicus
ENSGAFG00000019577	slbp	89	52.459	ENSRBIG00000039159	SLBP	81	54.673	Rhinopithecus_bieti
ENSGAFG00000019577	slbp	89	52.459	ENSRROG00000030081	SLBP	83	52.227	Rhinopithecus_roxellana
ENSGAFG00000019577	slbp	66	54.144	ENSSBOG00000033897	SLBP	86	53.261	Saimiri_boliviensis_boliviensis
ENSGAFG00000019577	slbp	79	53.812	ENSSHAG00000013939	SLBP	84	49.632	Sarcophilus_harrisii
ENSGAFG00000019577	slbp	98	57.509	ENSSFOG00015019429	slbp	97	57.509	Scleropages_formosus
ENSGAFG00000019577	slbp	97	69.884	ENSSMAG00000016028	-	97	68.116	Scophthalmus_maximus
ENSGAFG00000019577	slbp	100	74.638	ENSSDUG00000000855	-	100	74.638	Seriola_dumerili
ENSGAFG00000019577	slbp	98	54.651	ENSSLDG00000007554	-	83	53.876	Seriola_lalandi_dorsalis
ENSGAFG00000019577	slbp	57	78.146	ENSSLDG00000022893	-	87	80.822	Seriola_lalandi_dorsalis
ENSGAFG00000019577	slbp	90	47.561	ENSSPUG00000016007	SLBP	87	50.800	Sphenodon_punctatus
ENSGAFG00000019577	slbp	100	72.830	ENSSPAG00000004021	slbp	100	73.643	Stegastes_partitus
ENSGAFG00000019577	slbp	77	57.426	ENSSSCG00000008676	SLBP	84	51.383	Sus_scrofa
ENSGAFG00000019577	slbp	89	50.607	ENSTGUG00000010626	-	88	51.012	Taeniopygia_guttata
ENSGAFG00000019577	slbp	100	68.846	ENSTRUG00000000688	slbp	97	70.260	Takifugu_rubripes
ENSGAFG00000019577	slbp	93	67.647	ENSTNIG00000000484	-	98	68.145	Tetraodon_nigroviridis
ENSGAFG00000019577	slbp	76	31.472	ENSTBEG00000004085	SLBP	88	31.687	Tupaia_belangeri
ENSGAFG00000019577	slbp	57	66.000	ENSTTRG00000010901	-	88	54.245	Tursiops_truncatus
ENSGAFG00000019577	slbp	57	61.333	ENSTTRG00000004010	-	91	56.024	Tursiops_truncatus
ENSGAFG00000019577	slbp	71	57.812	ENSUAMG00000012990	SLBP	81	52.823	Ursus_americanus
ENSGAFG00000019577	slbp	76	56.500	ENSVVUG00000015578	-	82	51.613	Vulpes_vulpes
ENSGAFG00000019577	slbp	92	50.781	ENSXETG00000003876	slbp	87	50.000	Xenopus_tropicalis
ENSGAFG00000019577	slbp	100	95.349	ENSXCOG00000008275	slbp	100	95.349	Xiphophorus_couchianus
ENSGAFG00000019577	slbp	100	97.407	ENSXMAG00000001331	-	99	97.407	Xiphophorus_maculatus