EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000019664 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 51591 bases
Position: chrNHOQ01000179.1:110710-162300
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000029145	S1	PF00575.23	3.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000029444	-	3741	-	ENSGAFP00000029145	996 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019664's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019664	si:ch211-117n7.8	97	51.160	ENSG00000068784	SRBD1	98	50.849	Homo_sapiens
ENSGAFG00000019664	si:ch211-117n7.8	100	78.325	ENSAPOG00000005103	si:ch211-117n7.8	100	78.677	Acanthochromis_polyacanthus
ENSGAFG00000019664	si:ch211-117n7.8	93	53.180	ENSAMEG00000005993	SRBD1	98	51.341	Ailuropoda_melanoleuca
ENSGAFG00000019664	si:ch211-117n7.8	97	78.766	ENSACIG00000009875	si:ch211-117n7.8	100	78.766	Amphilophus_citrinellus
ENSGAFG00000019664	si:ch211-117n7.8	100	78.162	ENSAOCG00000024718	si:ch211-117n7.8	100	78.162	Amphiprion_ocellaris
ENSGAFG00000019664	si:ch211-117n7.8	97	79.363	ENSAPEG00000002645	si:ch211-117n7.8	99	79.363	Amphiprion_percula
ENSGAFG00000019664	si:ch211-117n7.8	100	76.505	ENSATEG00000010844	si:ch211-117n7.8	100	76.703	Anabas_testudineus
ENSGAFG00000019664	si:ch211-117n7.8	95	53.792	ENSAPLG00000006313	SRBD1	98	52.663	Anas_platyrhynchos
ENSGAFG00000019664	si:ch211-117n7.8	97	51.423	ENSANAG00000025573	SRBD1	98	51.100	Aotus_nancymaae
ENSGAFG00000019664	si:ch211-117n7.8	100	78.927	ENSACLG00000024219	si:ch211-117n7.8	100	78.927	Astatotilapia_calliptera
ENSGAFG00000019664	si:ch211-117n7.8	100	62.512	ENSAMXG00000004294	SRBD1	100	63.941	Astyanax_mexicanus
ENSGAFG00000019664	si:ch211-117n7.8	93	52.415	ENSBTAG00000007508	SRBD1	97	49.645	Bos_taurus
ENSGAFG00000019664	si:ch211-117n7.8	97	51.113	ENSCJAG00000000727	SRBD1	84	56.604	Callithrix_jacchus
ENSGAFG00000019664	si:ch211-117n7.8	89	54.878	ENSCAFG00000002554	SRBD1	88	54.878	Canis_familiaris
ENSGAFG00000019664	si:ch211-117n7.8	84	57.674	ENSCAFG00020026284	SRBD1	97	57.674	Canis_lupus_dingo
ENSGAFG00000019664	si:ch211-117n7.8	93	52.784	ENSCHIG00000016535	SRBD1	97	50.896	Capra_hircus
ENSGAFG00000019664	si:ch211-117n7.8	94	53.443	ENSTSYG00000012797	SRBD1	99	51.111	Carlito_syrichta
ENSGAFG00000019664	si:ch211-117n7.8	97	52.337	ENSCPOG00000004773	SRBD1	98	51.714	Cavia_porcellus
ENSGAFG00000019664	si:ch211-117n7.8	97	51.264	ENSCCAG00000025589	SRBD1	98	51.000	Cebus_capucinus
ENSGAFG00000019664	si:ch211-117n7.8	97	51.365	ENSCATG00000039530	SRBD1	98	50.951	Cercocebus_atys
ENSGAFG00000019664	si:ch211-117n7.8	99	52.079	ENSCLAG00000008623	SRBD1	90	55.617	Chinchilla_lanigera
ENSGAFG00000019664	si:ch211-117n7.8	97	51.515	ENSCSAG00000013350	SRBD1	98	51.100	Chlorocebus_sabaeus
ENSGAFG00000019664	si:ch211-117n7.8	71	79.070	ENSCHOG00000003805	SRBD1	69	79.070	Choloepus_hoffmanni
ENSGAFG00000019664	si:ch211-117n7.8	97	52.266	ENSCPBG00000005677	SRBD1	100	51.711	Chrysemys_picta_bellii
ENSGAFG00000019664	si:ch211-117n7.8	79	39.950	ENSCING00000005950	-	99	39.950	Ciona_intestinalis
ENSGAFG00000019664	si:ch211-117n7.8	79	42.532	ENSCSAVG00000000861	-	99	42.405	Ciona_savignyi
ENSGAFG00000019664	si:ch211-117n7.8	97	51.111	ENSCANG00000016307	SRBD1	98	50.800	Colobus_angolensis_palliatus
ENSGAFG00000019664	si:ch211-117n7.8	99	51.093	ENSCGRG00001000513	Srbd1	85	56.890	Cricetulus_griseus_chok1gshd
ENSGAFG00000019664	si:ch211-117n7.8	99	51.093	ENSCGRG00000002283	Srbd1	85	56.890	Cricetulus_griseus_crigri
ENSGAFG00000019664	si:ch211-117n7.8	100	71.640	ENSCSEG00000000856	si:ch211-117n7.8	100	71.344	Cynoglossus_semilaevis
ENSGAFG00000019664	si:ch211-117n7.8	98	81.327	ENSCVAG00000020212	si:ch211-117n7.8	99	81.828	Cyprinodon_variegatus
ENSGAFG00000019664	si:ch211-117n7.8	84	55.869	ENSDNOG00000018686	SRBD1	83	55.869	Dasypus_novemcinctus
ENSGAFG00000019664	si:ch211-117n7.8	99	48.974	ENSDORG00000010468	Srbd1	85	56.345	Dipodomys_ordii
ENSGAFG00000019664	si:ch211-117n7.8	79	35.985	FBgn0051156	CG31156	79	36.364	Drosophila_melanogaster
ENSGAFG00000019664	si:ch211-117n7.8	79	58.577	ENSETEG00000000739	SRBD1	82	58.439	Echinops_telfairi
ENSGAFG00000019664	si:ch211-117n7.8	72	48.623	ENSEBUG00000008902	si:ch211-117n7.8	95	48.623	Eptatretus_burgeri
ENSGAFG00000019664	si:ch211-117n7.8	97	49.849	ENSEASG00005003132	SRBD1	98	55.513	Equus_asinus_asinus
ENSGAFG00000019664	si:ch211-117n7.8	97	51.610	ENSECAG00000013865	SRBD1	98	50.971	Equus_caballus
ENSGAFG00000019664	si:ch211-117n7.8	100	64.442	ENSELUG00000012592	si:ch211-117n7.8	100	64.279	Esox_lucius
ENSGAFG00000019664	si:ch211-117n7.8	97	51.564	ENSFCAG00000005101	SRBD1	98	51.241	Felis_catus
ENSGAFG00000019664	si:ch211-117n7.8	84	58.107	ENSFALG00000012966	SRBD1	97	53.546	Ficedula_albicollis
ENSGAFG00000019664	si:ch211-117n7.8	97	52.347	ENSFDAG00000016670	SRBD1	89	56.264	Fukomys_damarensis
ENSGAFG00000019664	si:ch211-117n7.8	100	84.804	ENSFHEG00000019480	si:ch211-117n7.8	100	84.706	Fundulus_heteroclitus
ENSGAFG00000019664	si:ch211-117n7.8	50	71.631	ENSGMOG00000018010	-	100	71.631	Gadus_morhua
ENSGAFG00000019664	si:ch211-117n7.8	84	59.670	ENSGALG00000009990	SRBD1	98	54.328	Gallus_gallus
ENSGAFG00000019664	si:ch211-117n7.8	62	81.308	ENSGACG00000010794	si:ch211-117n7.8	100	81.308	Gasterosteus_aculeatus
ENSGAFG00000019664	si:ch211-117n7.8	84	58.422	ENSGAGG00000006166	SRBD1	99	58.422	Gopherus_agassizii
ENSGAFG00000019664	si:ch211-117n7.8	97	51.414	ENSGGOG00000005910	SRBD1	91	54.839	Gorilla_gorilla
ENSGAFG00000019664	si:ch211-117n7.8	97	67.073	ENSHBUG00000013207	si:ch211-117n7.8	100	67.073	Haplochromis_burtoni
ENSGAFG00000019664	si:ch211-117n7.8	98	51.859	ENSHGLG00000018153	-	90	55.150	Heterocephalus_glaber_female
ENSGAFG00000019664	si:ch211-117n7.8	98	51.859	ENSHGLG00100015183	-	90	55.150	Heterocephalus_glaber_male
ENSGAFG00000019664	si:ch211-117n7.8	100	62.916	ENSIPUG00000009661	srbd1	100	64.363	Ictalurus_punctatus
ENSGAFG00000019664	si:ch211-117n7.8	98	53.006	ENSSTOG00000005898	SRBD1	98	52.637	Ictidomys_tridecemlineatus
ENSGAFG00000019664	si:ch211-117n7.8	98	50.701	ENSJJAG00000022244	Srbd1	98	49.950	Jaculus_jaculus
ENSGAFG00000019664	si:ch211-117n7.8	99	81.728	ENSKMAG00000003473	si:ch211-117n7.8	100	81.629	Kryptolebias_marmoratus
ENSGAFG00000019664	si:ch211-117n7.8	100	77.134	ENSLBEG00000027518	si:ch211-117n7.8	100	77.036	Labrus_bergylta
ENSGAFG00000019664	si:ch211-117n7.8	84	57.963	ENSLACG00000009790	SRBD1	99	57.963	Latimeria_chalumnae
ENSGAFG00000019664	si:ch211-117n7.8	93	62.293	ENSLOCG00000016360	si:ch211-117n7.8	99	60.763	Lepisosteus_oculatus
ENSGAFG00000019664	si:ch211-117n7.8	97	51.212	ENSMFAG00000042026	SRBD1	98	51.000	Macaca_fascicularis
ENSGAFG00000019664	si:ch211-117n7.8	88	54.667	ENSMMUG00000003490	SRBD1	98	51.000	Macaca_mulatta
ENSGAFG00000019664	si:ch211-117n7.8	97	49.697	ENSMNEG00000034701	SRBD1	98	49.500	Macaca_nemestrina
ENSGAFG00000019664	si:ch211-117n7.8	97	51.313	ENSMLEG00000000745	SRBD1	98	51.100	Mandrillus_leucophaeus
ENSGAFG00000019664	si:ch211-117n7.8	100	76.793	ENSMAMG00000021921	si:ch211-117n7.8	100	77.390	Mastacembelus_armatus
ENSGAFG00000019664	si:ch211-117n7.8	100	79.024	ENSMZEG00005027369	si:ch211-117n7.8	100	79.024	Maylandia_zebra
ENSGAFG00000019664	si:ch211-117n7.8	80	56.250	ENSMGAG00000010273	SRBD1	100	56.373	Meleagris_gallopavo
ENSGAFG00000019664	si:ch211-117n7.8	78	56.227	ENSMAUG00000013916	Srbd1	95	56.227	Mesocricetus_auratus
ENSGAFG00000019664	si:ch211-117n7.8	97	51.360	ENSMICG00000007835	SRBD1	99	50.587	Microcebus_murinus
ENSGAFG00000019664	si:ch211-117n7.8	99	51.045	ENSMOCG00000018716	Srbd1	90	54.204	Microtus_ochrogaster
ENSGAFG00000019664	si:ch211-117n7.8	97	75.281	ENSMMOG00000007507	si:ch211-117n7.8	100	74.872	Mola_mola
ENSGAFG00000019664	si:ch211-117n7.8	100	76.275	ENSMALG00000001562	si:ch211-117n7.8	100	76.275	Monopterus_albus
ENSGAFG00000019664	si:ch211-117n7.8	84	56.992	MGP_CAROLIEiJ_G0021934	Srbd1	99	58.958	Mus_caroli
ENSGAFG00000019664	si:ch211-117n7.8	84	56.992	ENSMUSG00000024135	Srbd1	99	56.272	Mus_musculus
ENSGAFG00000019664	si:ch211-117n7.8	99	50.990	MGP_PahariEiJ_G0020924	Srbd1	99	51.089	Mus_pahari
ENSGAFG00000019664	si:ch211-117n7.8	84	56.992	MGP_SPRETEiJ_G0022850	Srbd1	85	56.992	Mus_spretus
ENSGAFG00000019664	si:ch211-117n7.8	93	53.237	ENSMLUG00000007039	SRBD1	98	51.741	Myotis_lucifugus
ENSGAFG00000019664	si:ch211-117n7.8	84	55.290	ENSNGAG00000011893	Srbd1	85	55.290	Nannospalax_galili
ENSGAFG00000019664	si:ch211-117n7.8	97	75.831	ENSNBRG00000012873	si:ch211-117n7.8	100	75.831	Neolamprologus_brichardi
ENSGAFG00000019664	si:ch211-117n7.8	84	56.250	ENSNLEG00000016877	SRBD1	83	56.250	Nomascus_leucogenys
ENSGAFG00000019664	si:ch211-117n7.8	93	52.804	ENSODEG00000012095	SRBD1	95	52.834	Octodon_degus
ENSGAFG00000019664	si:ch211-117n7.8	100	79.220	ENSONIG00000000945	si:ch211-117n7.8	100	84.588	Oreochromis_niloticus
ENSGAFG00000019664	si:ch211-117n7.8	94	52.953	ENSOCUG00000015385	SRBD1	88	55.257	Oryctolagus_cuniculus
ENSGAFG00000019664	si:ch211-117n7.8	100	72.701	ENSORLG00000004427	si:ch211-117n7.8	100	72.407	Oryzias_latipes
ENSGAFG00000019664	si:ch211-117n7.8	100	75.953	ENSORLG00020012792	si:ch211-117n7.8	100	75.855	Oryzias_latipes_hni
ENSGAFG00000019664	si:ch211-117n7.8	100	75.734	ENSORLG00015018598	si:ch211-117n7.8	100	75.342	Oryzias_latipes_hsok
ENSGAFG00000019664	si:ch211-117n7.8	99	75.271	ENSOMEG00000012229	si:ch211-117n7.8	99	78.409	Oryzias_melastigma
ENSGAFG00000019664	si:ch211-117n7.8	84	55.164	ENSOGAG00000001076	SRBD1	84	55.164	Otolemur_garnettii
ENSGAFG00000019664	si:ch211-117n7.8	93	49.550	ENSOARG00000005958	SRBD1	98	47.738	Ovis_aries
ENSGAFG00000019664	si:ch211-117n7.8	97	50.959	ENSPPAG00000038442	SRBD1	98	50.649	Pan_paniscus
ENSGAFG00000019664	si:ch211-117n7.8	97	51.616	ENSPPRG00000003449	SRBD1	98	51.292	Panthera_pardus
ENSGAFG00000019664	si:ch211-117n7.8	97	51.616	ENSPTIG00000012495	SRBD1	98	51.292	Panthera_tigris_altaica
ENSGAFG00000019664	si:ch211-117n7.8	97	51.160	ENSPTRG00000011889	SRBD1	98	50.849	Pan_troglodytes
ENSGAFG00000019664	si:ch211-117n7.8	97	50.909	ENSPANG00000008063	SRBD1	98	50.700	Papio_anubis
ENSGAFG00000019664	si:ch211-117n7.8	94	64.218	ENSPKIG00000021973	si:ch211-117n7.8	99	61.176	Paramormyrops_kingsleyae
ENSGAFG00000019664	si:ch211-117n7.8	84	57.497	ENSPSIG00000008992	SRBD1	98	51.500	Pelodiscus_sinensis
ENSGAFG00000019664	si:ch211-117n7.8	85	78.947	ENSPMGG00000013348	si:ch211-117n7.8	99	72.386	Periophthalmus_magnuspinnatus
ENSGAFG00000019664	si:ch211-117n7.8	98	50.147	ENSPEMG00000020684	Srbd1	85	55.172	Peromyscus_maniculatus_bairdii
ENSGAFG00000019664	si:ch211-117n7.8	100	94.611	ENSPFOG00000010650	si:ch211-117n7.8	100	94.511	Poecilia_formosa
ENSGAFG00000019664	si:ch211-117n7.8	100	94.711	ENSPLAG00000002141	si:ch211-117n7.8	100	94.611	Poecilia_latipinna
ENSGAFG00000019664	si:ch211-117n7.8	100	94.810	ENSPMEG00000018537	si:ch211-117n7.8	100	94.711	Poecilia_mexicana
ENSGAFG00000019664	si:ch211-117n7.8	100	90.864	ENSPREG00000003258	si:ch211-117n7.8	100	90.765	Poecilia_reticulata
ENSGAFG00000019664	si:ch211-117n7.8	97	47.859	ENSPPYG00000012444	SRBD1	88	50.729	Pongo_abelii
ENSGAFG00000019664	si:ch211-117n7.8	76	52.237	ENSPCAG00000005629	SRBD1	80	52.237	Procavia_capensis
ENSGAFG00000019664	si:ch211-117n7.8	97	44.177	ENSPCOG00000017669	SRBD1	99	42.829	Propithecus_coquereli
ENSGAFG00000019664	si:ch211-117n7.8	89	48.242	ENSPVAG00000001782	SRBD1	89	48.242	Pteropus_vampyrus
ENSGAFG00000019664	si:ch211-117n7.8	97	73.727	ENSPNYG00000000508	si:ch211-117n7.8	100	73.727	Pundamilia_nyererei
ENSGAFG00000019664	si:ch211-117n7.8	94	67.334	ENSPNAG00000013492	SRBD1	99	65.269	Pygocentrus_nattereri
ENSGAFG00000019664	si:ch211-117n7.8	84	55.948	ENSRNOG00000014720	Srbd1	83	56.377	Rattus_norvegicus
ENSGAFG00000019664	si:ch211-117n7.8	97	51.010	ENSRBIG00000033486	SRBD1	89	54.444	Rhinopithecus_bieti
ENSGAFG00000019664	si:ch211-117n7.8	97	51.010	ENSRROG00000041599	SRBD1	89	54.444	Rhinopithecus_roxellana
ENSGAFG00000019664	si:ch211-117n7.8	84	56.604	ENSSBOG00000024982	SRBD1	98	50.900	Saimiri_boliviensis_boliviensis
ENSGAFG00000019664	si:ch211-117n7.8	86	66.667	ENSSFOG00015001128	si:ch211-117n7.8	94	66.667	Scleropages_formosus
ENSGAFG00000019664	si:ch211-117n7.8	100	76.608	ENSSMAG00000018256	si:ch211-117n7.8	100	76.511	Scophthalmus_maximus
ENSGAFG00000019664	si:ch211-117n7.8	94	79.772	ENSSLDG00000023189	si:ch211-117n7.8	99	78.020	Seriola_lalandi_dorsalis
ENSGAFG00000019664	si:ch211-117n7.8	87	51.570	ENSSARG00000009740	SRBD1	90	51.570	Sorex_araneus
ENSGAFG00000019664	si:ch211-117n7.8	85	58.941	ENSSPUG00000010475	SRBD1	94	58.941	Sphenodon_punctatus
ENSGAFG00000019664	si:ch211-117n7.8	97	75.248	ENSSPAG00000008092	-	100	75.149	Stegastes_partitus
ENSGAFG00000019664	si:ch211-117n7.8	93	53.002	ENSSSCG00000008445	SRBD1	87	54.465	Sus_scrofa
ENSGAFG00000019664	si:ch211-117n7.8	84	58.373	ENSTGUG00000003878	SRBD1	100	58.373	Taeniopygia_guttata
ENSGAFG00000019664	si:ch211-117n7.8	99	73.171	ENSTRUG00000007080	si:ch211-117n7.8	99	78.587	Takifugu_rubripes
ENSGAFG00000019664	si:ch211-117n7.8	97	72.178	ENSTNIG00000007464	si:ch211-117n7.8	98	71.655	Tetraodon_nigroviridis
ENSGAFG00000019664	si:ch211-117n7.8	65	80.851	ENSTBEG00000004556	SRBD1	69	80.851	Tupaia_belangeri
ENSGAFG00000019664	si:ch211-117n7.8	76	57.968	ENSTTRG00000011871	SRBD1	75	57.968	Tursiops_truncatus
ENSGAFG00000019664	si:ch211-117n7.8	97	52.073	ENSUAMG00000008126	SRBD1	97	53.261	Ursus_americanus
ENSGAFG00000019664	si:ch211-117n7.8	97	52.073	ENSUMAG00000012902	SRBD1	83	57.126	Ursus_maritimus
ENSGAFG00000019664	si:ch211-117n7.8	84	56.486	ENSVPAG00000006825	SRBD1	92	56.486	Vicugna_pacos
ENSGAFG00000019664	si:ch211-117n7.8	97	51.619	ENSVVUG00000005389	SRBD1	100	50.441	Vulpes_vulpes
ENSGAFG00000019664	si:ch211-117n7.8	98	46.339	ENSXETG00000002760	srbd1	98	45.946	Xenopus_tropicalis
ENSGAFG00000019664	si:ch211-117n7.8	100	96.707	ENSXMAG00000016861	si:ch211-117n7.8	100	96.707	Xiphophorus_maculatus