EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000019770 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 10128 bases
Position: chrNHOQ01000190.1:720373-730500
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000029294	POP1	PF06978.11	2.7e-35	1	2
ENSGAFP00000029294	POP1	PF06978.11	2.7e-35	2	2
ENSGAFP00000029294	POPLD	PF08170.12	2.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000029595	POP1-201	3909	-	ENSGAFP00000029294	957 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019770	POP1	100	47.110	ENSG00000104356	POP1	100	47.642	Homo_sapiens
ENSGAFG00000019770	POP1	100	73.684	ENSAPOG00000008198	pop1	100	73.684	Acanthochromis_polyacanthus
ENSGAFG00000019770	POP1	100	47.615	ENSAMEG00000000556	POP1	100	47.615	Ailuropoda_melanoleuca
ENSGAFG00000019770	POP1	100	67.713	ENSACIG00000004169	POP1	100	67.205	Amphilophus_citrinellus
ENSGAFG00000019770	POP1	100	73.759	ENSAOCG00000010991	pop1	100	73.759	Amphiprion_ocellaris
ENSGAFG00000019770	POP1	100	67.674	ENSAPEG00000007607	pop1	100	67.472	Amphiprion_percula
ENSGAFG00000019770	POP1	100	69.363	ENSATEG00000024814	POP1	100	69.666	Anabas_testudineus
ENSGAFG00000019770	POP1	94	49.574	ENSAPLG00000014418	POP1	99	49.787	Anas_platyrhynchos
ENSGAFG00000019770	POP1	100	46.332	ENSACAG00000016083	POP1	100	46.525	Anolis_carolinensis
ENSGAFG00000019770	POP1	87	53.043	ENSANAG00000026360	POP1	99	53.043	Aotus_nancymaae
ENSGAFG00000019770	POP1	100	70.867	ENSACLG00000010951	pop1	100	71.270	Astatotilapia_calliptera
ENSGAFG00000019770	POP1	100	55.424	ENSAMXG00000014483	POP1	100	55.424	Astyanax_mexicanus
ENSGAFG00000019770	POP1	100	48.839	ENSBTAG00000012596	POP1	100	48.549	Bos_taurus
ENSGAFG00000019770	POP1	71	30.040	WBGene00015486	C05D11.9	59	31.081	Caenorhabditis_elegans
ENSGAFG00000019770	POP1	100	47.420	ENSCJAG00000015567	POP1	100	47.712	Callithrix_jacchus
ENSGAFG00000019770	POP1	100	48.571	ENSCAFG00000000469	POP1	100	48.571	Canis_familiaris
ENSGAFG00000019770	POP1	100	47.839	ENSCAFG00020026765	POP1	100	47.839	Canis_lupus_dingo
ENSGAFG00000019770	POP1	94	52.126	ENSCHIG00000017066	POP1	100	48.309	Capra_hircus
ENSGAFG00000019770	POP1	100	46.628	ENSTSYG00000003097	POP1	100	47.262	Carlito_syrichta
ENSGAFG00000019770	POP1	100	46.453	ENSCAPG00000007251	POP1	100	46.453	Cavia_aperea
ENSGAFG00000019770	POP1	100	47.122	ENSCPOG00000002901	POP1	100	47.122	Cavia_porcellus
ENSGAFG00000019770	POP1	100	47.605	ENSCCAG00000018939	POP1	100	47.605	Cebus_capucinus
ENSGAFG00000019770	POP1	100	47.064	ENSCATG00000040916	POP1	100	47.064	Cercocebus_atys
ENSGAFG00000019770	POP1	100	46.718	ENSCLAG00000007208	POP1	97	46.622	Chinchilla_lanigera
ENSGAFG00000019770	POP1	91	49.467	ENSCSAG00000012340	POP1	98	49.407	Chlorocebus_sabaeus
ENSGAFG00000019770	POP1	93	46.646	ENSCHOG00000011432	POP1	96	46.646	Choloepus_hoffmanni
ENSGAFG00000019770	POP1	100	49.163	ENSCPBG00000006373	POP1	100	49.557	Chrysemys_picta_bellii
ENSGAFG00000019770	POP1	82	35.341	ENSCING00000008323	-	88	34.538	Ciona_intestinalis
ENSGAFG00000019770	POP1	100	47.587	ENSCANG00000001647	POP1	100	47.587	Colobus_angolensis_palliatus
ENSGAFG00000019770	POP1	100	46.394	ENSCGRG00001017308	Pop1	100	46.777	Cricetulus_griseus_chok1gshd
ENSGAFG00000019770	POP1	100	43.725	ENSCGRG00000010824	Pop1	100	44.367	Cricetulus_griseus_crigri
ENSGAFG00000019770	POP1	100	65.923	ENSCSEG00000008737	POP1	100	66.531	Cynoglossus_semilaevis
ENSGAFG00000019770	POP1	100	76.923	ENSCVAG00000022248	pop1	100	77.333	Cyprinodon_variegatus
ENSGAFG00000019770	POP1	53	53.846	ENSDARG00000102087	pop1	98	53.846	Danio_rerio
ENSGAFG00000019770	POP1	100	44.392	ENSDNOG00000019974	POP1	100	44.486	Dasypus_novemcinctus
ENSGAFG00000019770	POP1	100	41.273	ENSDORG00000015384	Pop1	100	41.948	Dipodomys_ordii
ENSGAFG00000019770	POP1	88	46.127	ENSETEG00000007839	POP1	88	46.127	Echinops_telfairi
ENSGAFG00000019770	POP1	100	46.800	ENSEASG00005003189	POP1	98	46.962	Equus_asinus_asinus
ENSGAFG00000019770	POP1	100	47.252	ENSECAG00000024236	POP1	100	47.445	Equus_caballus
ENSGAFG00000019770	POP1	50	72.152	ENSEEUG00000003050	-	53	78.788	Erinaceus_europaeus
ENSGAFG00000019770	POP1	100	59.695	ENSELUG00000003526	pop1	100	60.508	Esox_lucius
ENSGAFG00000019770	POP1	100	47.076	ENSFCAG00000002168	POP1	100	47.042	Felis_catus
ENSGAFG00000019770	POP1	100	46.887	ENSFALG00000005711	POP1	100	47.184	Ficedula_albicollis
ENSGAFG00000019770	POP1	100	46.565	ENSFDAG00000017068	POP1	100	46.827	Fukomys_damarensis
ENSGAFG00000019770	POP1	100	77.073	ENSFHEG00000019518	pop1	100	77.073	Fundulus_heteroclitus
ENSGAFG00000019770	POP1	100	58.676	ENSGMOG00000000659	POP1	100	58.659	Gadus_morhua
ENSGAFG00000019770	POP1	100	64.327	ENSGACG00000003499	pop1	91	70.907	Gasterosteus_aculeatus
ENSGAFG00000019770	POP1	100	48.833	ENSGAGG00000011737	POP1	98	49.125	Gopherus_agassizii
ENSGAFG00000019770	POP1	100	47.155	ENSGGOG00000003176	POP1	100	47.546	Gorilla_gorilla
ENSGAFG00000019770	POP1	100	71.169	ENSHBUG00000021583	pop1	100	71.472	Haplochromis_burtoni
ENSGAFG00000019770	POP1	100	47.031	ENSHGLG00000006029	POP1	100	47.031	Heterocephalus_glaber_female
ENSGAFG00000019770	POP1	100	47.031	ENSHGLG00100016879	POP1	100	47.031	Heterocephalus_glaber_male
ENSGAFG00000019770	POP1	100	61.569	ENSHCOG00000013888	pop1	100	60.582	Hippocampus_comes
ENSGAFG00000019770	POP1	99	55.034	ENSIPUG00000018336	pop1	100	54.980	Ictalurus_punctatus
ENSGAFG00000019770	POP1	100	47.139	ENSSTOG00000011455	POP1	97	47.139	Ictidomys_tridecemlineatus
ENSGAFG00000019770	POP1	100	46.086	ENSJJAG00000013325	Pop1	100	46.397	Jaculus_jaculus
ENSGAFG00000019770	POP1	100	73.717	ENSKMAG00000001346	POP1	100	73.717	Kryptolebias_marmoratus
ENSGAFG00000019770	POP1	100	64.271	ENSLBEG00000024457	POP1	100	64.271	Labrus_bergylta
ENSGAFG00000019770	POP1	94	50.568	ENSLACG00000012498	POP1	98	51.182	Latimeria_chalumnae
ENSGAFG00000019770	POP1	100	54.057	ENSLOCG00000009817	POP1	100	54.769	Lepisosteus_oculatus
ENSGAFG00000019770	POP1	100	47.053	ENSLAFG00000010770	POP1	100	47.440	Loxodonta_africana
ENSGAFG00000019770	POP1	100	47.201	ENSMFAG00000000347	POP1	100	47.064	Macaca_fascicularis
ENSGAFG00000019770	POP1	100	47.161	ENSMNEG00000036870	POP1	100	47.161	Macaca_nemestrina
ENSGAFG00000019770	POP1	100	47.257	ENSMLEG00000034986	POP1	100	47.257	Mandrillus_leucophaeus
ENSGAFG00000019770	POP1	100	70.528	ENSMAMG00000004040	pop1	100	70.528	Mastacembelus_armatus
ENSGAFG00000019770	POP1	100	70.766	ENSMZEG00005025448	pop1	100	71.169	Maylandia_zebra
ENSGAFG00000019770	POP1	100	45.962	ENSMGAG00000012167	POP1	100	46.323	Meleagris_gallopavo
ENSGAFG00000019770	POP1	100	46.732	ENSMAUG00000017537	Pop1	100	46.732	Mesocricetus_auratus
ENSGAFG00000019770	POP1	100	46.538	ENSMICG00000004361	POP1	100	46.538	Microcebus_murinus
ENSGAFG00000019770	POP1	100	46.377	ENSMOCG00000006356	Pop1	100	46.429	Microtus_ochrogaster
ENSGAFG00000019770	POP1	100	64.271	ENSMMOG00000018242	pop1	100	64.271	Mola_mola
ENSGAFG00000019770	POP1	100	45.507	ENSMODG00000006561	POP1	100	45.845	Monodelphis_domestica
ENSGAFG00000019770	POP1	100	68.794	ENSMALG00000012621	POP1	100	68.794	Monopterus_albus
ENSGAFG00000019770	POP1	100	44.744	MGP_CAROLIEiJ_G0019726	Pop1	100	44.691	Mus_caroli
ENSGAFG00000019770	POP1	100	44.638	ENSMUSG00000022325	Pop1	100	44.638	Mus_musculus
ENSGAFG00000019770	POP1	100	44.606	MGP_PahariEiJ_G0019735	Pop1	100	44.553	Mus_pahari
ENSGAFG00000019770	POP1	100	44.874	MGP_SPRETEiJ_G0020622	Pop1	100	44.821	Mus_spretus
ENSGAFG00000019770	POP1	100	47.784	ENSMPUG00000015250	POP1	100	47.872	Mustela_putorius_furo
ENSGAFG00000019770	POP1	100	46.176	ENSMLUG00000010204	POP1	100	46.325	Myotis_lucifugus
ENSGAFG00000019770	POP1	100	46.198	ENSNGAG00000001582	Pop1	100	46.295	Nannospalax_galili
ENSGAFG00000019770	POP1	100	66.599	ENSNBRG00000002356	pop1	100	65.891	Neolamprologus_brichardi
ENSGAFG00000019770	POP1	100	47.353	ENSNLEG00000002541	POP1	100	47.353	Nomascus_leucogenys
ENSGAFG00000019770	POP1	87	54.438	ENSMEUG00000003118	POP1	90	54.438	Notamacropus_eugenii
ENSGAFG00000019770	POP1	100	46.491	ENSOPRG00000007667	POP1	100	46.491	Ochotona_princeps
ENSGAFG00000019770	POP1	100	46.323	ENSODEG00000003984	POP1	100	46.848	Octodon_degus
ENSGAFG00000019770	POP1	100	71.472	ENSONIG00000016445	pop1	100	71.774	Oreochromis_niloticus
ENSGAFG00000019770	POP1	61	45.257	ENSOANG00000001278	-	94	45.257	Ornithorhynchus_anatinus
ENSGAFG00000019770	POP1	100	46.044	ENSOCUG00000017400	POP1	100	46.520	Oryctolagus_cuniculus
ENSGAFG00000019770	POP1	100	69.619	ENSORLG00000002839	pop1	100	70.298	Oryzias_latipes
ENSGAFG00000019770	POP1	100	64.724	ENSORLG00020022450	POP1	100	63.600	Oryzias_latipes_hni
ENSGAFG00000019770	POP1	100	69.691	ENSORLG00015012746	POP1	100	70.267	Oryzias_latipes_hsok
ENSGAFG00000019770	POP1	100	68.841	ENSOMEG00000006915	pop1	99	69.462	Oryzias_melastigma
ENSGAFG00000019770	POP1	100	46.146	ENSOGAG00000001466	POP1	100	46.146	Otolemur_garnettii
ENSGAFG00000019770	POP1	100	47.206	ENSPPAG00000018410	POP1	100	47.738	Pan_paniscus
ENSGAFG00000019770	POP1	100	46.990	ENSPPRG00000005002	POP1	100	47.276	Panthera_pardus
ENSGAFG00000019770	POP1	100	47.030	ENSPTIG00000016527	POP1	100	46.996	Panthera_tigris_altaica
ENSGAFG00000019770	POP1	100	46.917	ENSPTRG00000020458	POP1	100	47.449	Pan_troglodytes
ENSGAFG00000019770	POP1	100	47.353	ENSPANG00000009704	POP1	100	47.353	Papio_anubis
ENSGAFG00000019770	POP1	100	58.519	ENSPKIG00000016325	POP1	100	58.418	Paramormyrops_kingsleyae
ENSGAFG00000019770	POP1	100	48.069	ENSPSIG00000012343	POP1	100	48.552	Pelodiscus_sinensis
ENSGAFG00000019770	POP1	100	61.723	ENSPMGG00000022253	POP1	100	61.623	Periophthalmus_magnuspinnatus
ENSGAFG00000019770	POP1	99	46.059	ENSPEMG00000023633	Pop1	100	46.439	Peromyscus_maniculatus_bairdii
ENSGAFG00000019770	POP1	91	43.770	ENSPMAG00000003209	POP1	99	43.776	Petromyzon_marinus
ENSGAFG00000019770	POP1	100	45.797	ENSPCIG00000012216	POP1	100	45.990	Phascolarctos_cinereus
ENSGAFG00000019770	POP1	100	92.604	ENSPFOG00000012490	POP1	100	92.604	Poecilia_formosa
ENSGAFG00000019770	POP1	100	92.701	ENSPLAG00000004646	POP1	100	92.701	Poecilia_latipinna
ENSGAFG00000019770	POP1	100	92.708	ENSPMEG00000019592	POP1	100	92.708	Poecilia_mexicana
ENSGAFG00000019770	POP1	100	92.827	ENSPREG00000020951	POP1	100	92.827	Poecilia_reticulata
ENSGAFG00000019770	POP1	100	47.257	ENSPPYG00000018777	POP1	100	47.546	Pongo_abelii
ENSGAFG00000019770	POP1	100	44.050	ENSPCAG00000016662	POP1	100	44.123	Procavia_capensis
ENSGAFG00000019770	POP1	100	46.042	ENSPCOG00000019420	POP1	100	46.042	Propithecus_coquereli
ENSGAFG00000019770	POP1	100	47.087	ENSPVAG00000014468	POP1	100	47.578	Pteropus_vampyrus
ENSGAFG00000019770	POP1	100	67.280	ENSPNYG00000004476	pop1	100	66.837	Pundamilia_nyererei
ENSGAFG00000019770	POP1	100	54.804	ENSPNAG00000000265	pop1	100	54.706	Pygocentrus_nattereri
ENSGAFG00000019770	POP1	100	45.604	ENSRNOG00000005243	Pop1	100	46.019	Rattus_norvegicus
ENSGAFG00000019770	POP1	100	47.353	ENSRBIG00000007996	POP1	100	47.353	Rhinopithecus_bieti
ENSGAFG00000019770	POP1	100	47.546	ENSRROG00000012334	POP1	100	47.546	Rhinopithecus_roxellana
ENSGAFG00000019770	POP1	99	47.384	ENSSBOG00000020830	POP1	100	47.384	Saimiri_boliviensis_boliviensis
ENSGAFG00000019770	POP1	100	45.332	ENSSHAG00000000296	POP1	100	45.332	Sarcophilus_harrisii
ENSGAFG00000019770	POP1	100	58.836	ENSSFOG00015007429	pop1	99	58.836	Scleropages_formosus
ENSGAFG00000019770	POP1	100	68.000	ENSSMAG00000010467	POP1	100	68.615	Scophthalmus_maximus
ENSGAFG00000019770	POP1	100	71.717	ENSSDUG00000007817	POP1	100	71.717	Seriola_dumerili
ENSGAFG00000019770	POP1	100	71.818	ENSSLDG00000012565	POP1	100	71.818	Seriola_lalandi_dorsalis
ENSGAFG00000019770	POP1	100	44.898	ENSSPUG00000003550	-	100	45.384	Sphenodon_punctatus
ENSGAFG00000019770	POP1	100	70.714	ENSSPAG00000014955	pop1	100	69.756	Stegastes_partitus
ENSGAFG00000019770	POP1	100	47.348	ENSSSCG00000006078	POP1	100	47.348	Sus_scrofa
ENSGAFG00000019770	POP1	94	44.374	ENSTGUG00000012011	-	100	44.585	Taeniopygia_guttata
ENSGAFG00000019770	POP1	100	66.770	ENSTRUG00000010856	pop1	100	66.254	Takifugu_rubripes
ENSGAFG00000019770	POP1	95	67.227	ENSTNIG00000013297	pop1	100	67.227	Tetraodon_nigroviridis
ENSGAFG00000019770	POP1	93	46.372	ENSTBEG00000014214	POP1	96	46.583	Tupaia_belangeri
ENSGAFG00000019770	POP1	100	45.736	ENSTTRG00000016071	POP1	100	45.833	Tursiops_truncatus
ENSGAFG00000019770	POP1	99	48.204	ENSUAMG00000017309	POP1	100	48.204	Ursus_americanus
ENSGAFG00000019770	POP1	100	47.273	ENSUMAG00000016952	POP1	100	51.145	Ursus_maritimus
ENSGAFG00000019770	POP1	85	52.555	ENSVPAG00000008278	POP1	80	52.555	Vicugna_pacos
ENSGAFG00000019770	POP1	100	46.951	ENSVVUG00000010994	POP1	100	46.951	Vulpes_vulpes
ENSGAFG00000019770	POP1	100	81.244	ENSXCOG00000017043	POP1	100	80.734	Xiphophorus_couchianus
ENSGAFG00000019770	POP1	100	92.292	ENSXMAG00000002472	POP1	100	92.292	Xiphophorus_maculatus