EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000019818 (Gene tree)
Gene ID: -
Gene Symbol: p4ha1b
Alias: p4ha1|wu:fc69d06|wu:fi27h11|zgc:56058
Full Name: prolyl 4-hydroxylase%2C alpha polypeptide I b
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 13932 bases
Position: chrNHOQ01001229.1:16124659-16138590
Accession: ZDB-GENE-030131-4089
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000029381	2OG-FeII_Oxy	PF03171.20	2.2e-08	1	1
ENSGAFP00000029379	2OG-FeII_Oxy	PF03171.20	2.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000029682	-	2885	-	ENSGAFP00000029381	548 (aa)	-	-
ENSGAFT00000029680	-	2885	-	ENSGAFP00000029379	548 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000019818	p4ha1b	94	65.370	ENSGAFG00000005640	p4ha2	100	65.370

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019818	p4ha1b	98	75.046	ENSG00000122884	P4HA1	97	76.000	Homo_sapiens
ENSGAFG00000019818	p4ha1b	99	88.278	ENSAPOG00000005170	p4ha1b	97	88.258	Acanthochromis_polyacanthus
ENSGAFG00000019818	p4ha1b	98	75.046	ENSAMEG00000017009	P4HA1	97	76.190	Ailuropoda_melanoleuca
ENSGAFG00000019818	p4ha1b	99	85.009	ENSACIG00000007255	p4ha1b	99	85.086	Amphilophus_citrinellus
ENSGAFG00000019818	p4ha1b	100	88.342	ENSAOCG00000001647	p4ha1b	100	88.342	Amphiprion_ocellaris
ENSGAFG00000019818	p4ha1b	95	64.559	ENSAPEG00000010402	-	96	64.368	Amphiprion_percula
ENSGAFG00000019818	p4ha1b	100	88.342	ENSAPEG00000005243	p4ha1b	100	88.342	Amphiprion_percula
ENSGAFG00000019818	p4ha1b	100	87.956	ENSATEG00000009272	p4ha1b	100	87.956	Anabas_testudineus
ENSGAFG00000019818	p4ha1b	96	76.236	ENSAPLG00000009284	P4HA1	100	75.665	Anas_platyrhynchos
ENSGAFG00000019818	p4ha1b	96	76.091	ENSACAG00000000564	P4HA1	96	76.046	Anolis_carolinensis
ENSGAFG00000019818	p4ha1b	98	75.370	ENSANAG00000024545	P4HA1	96	77.622	Aotus_nancymaae
ENSGAFG00000019818	p4ha1b	100	86.157	ENSACLG00000021556	p4ha1b	100	86.157	Astatotilapia_calliptera
ENSGAFG00000019818	p4ha1b	98	80.331	ENSAMXG00000011123	p4ha1b	97	81.524	Astyanax_mexicanus
ENSGAFG00000019818	p4ha1b	98	75.416	ENSBTAG00000032996	P4HA1	97	76.571	Bos_taurus
ENSGAFG00000019818	p4ha1b	98	75.741	ENSCJAG00000007429	P4HA1	98	81.377	Callithrix_jacchus
ENSGAFG00000019818	p4ha1b	98	75.139	ENSCAFG00000014573	P4HA1	97	76.381	Canis_familiaris
ENSGAFG00000019818	p4ha1b	98	74.067	ENSCAFG00020023993	P4HA1	97	76.265	Canis_lupus_dingo
ENSGAFG00000019818	p4ha1b	98	75.651	ENSCHIG00000013957	P4HA1	97	76.571	Capra_hircus
ENSGAFG00000019818	p4ha1b	98	75.231	ENSTSYG00000004004	P4HA1	100	82.377	Carlito_syrichta
ENSGAFG00000019818	p4ha1b	98	74.488	ENSCPOG00000015701	P4HA1	96	77.622	Cavia_porcellus
ENSGAFG00000019818	p4ha1b	98	75.046	ENSCATG00000029618	P4HA1	96	77.622	Cercocebus_atys
ENSGAFG00000019818	p4ha1b	98	74.861	ENSCLAG00000017260	P4HA1	96	78.322	Chinchilla_lanigera
ENSGAFG00000019818	p4ha1b	98	75.046	ENSCSAG00000008626	P4HA1	97	76.000	Chlorocebus_sabaeus
ENSGAFG00000019818	p4ha1b	98	75.556	ENSCPBG00000007933	P4HA1	96	76.000	Chrysemys_picta_bellii
ENSGAFG00000019818	p4ha1b	98	75.046	ENSCANG00000033147	P4HA1	96	77.622	Colobus_angolensis_palliatus
ENSGAFG00000019818	p4ha1b	98	74.815	ENSCGRG00001007006	P4ha1	96	76.923	Cricetulus_griseus_chok1gshd
ENSGAFG00000019818	p4ha1b	98	74.815	ENSCGRG00000009371	P4ha1	96	76.923	Cricetulus_griseus_crigri
ENSGAFG00000019818	p4ha1b	99	85.451	ENSCSEG00000004939	p4ha1b	97	86.095	Cynoglossus_semilaevis
ENSGAFG00000019818	p4ha1b	100	91.788	ENSCVAG00000016433	p4ha1b	100	91.971	Cyprinodon_variegatus
ENSGAFG00000019818	p4ha1b	96	82.095	ENSDARG00000071082	p4ha1b	97	82.095	Danio_rerio
ENSGAFG00000019818	p4ha1b	95	38.506	ENSDARG00000017038	zgc:152670	93	53.419	Danio_rerio
ENSGAFG00000019818	p4ha1b	97	74.579	ENSDNOG00000013665	P4HA1	91	75.624	Dasypus_novemcinctus
ENSGAFG00000019818	p4ha1b	98	75.000	ENSDORG00000003405	P4ha1	96	78.322	Dipodomys_ordii
ENSGAFG00000019818	p4ha1b	97	61.654	ENSEBUG00000005379	p4ha1b	95	62.548	Eptatretus_burgeri
ENSGAFG00000019818	p4ha1b	95	74.664	ENSEASG00005016606	P4HA1	96	77.622	Equus_asinus_asinus
ENSGAFG00000019818	p4ha1b	98	74.302	ENSECAG00000012496	P4HA1	99	75.922	Equus_caballus
ENSGAFG00000019818	p4ha1b	84	72.549	ENSEEUG00000005542	P4HA1	82	78.261	Erinaceus_europaeus
ENSGAFG00000019818	p4ha1b	99	77.858	ENSELUG00000005913	p4ha1b	99	78.447	Esox_lucius
ENSGAFG00000019818	p4ha1b	98	75.416	ENSFCAG00000018673	P4HA1	97	76.571	Felis_catus
ENSGAFG00000019818	p4ha1b	98	75.000	ENSFALG00000012773	P4HA1	96	76.000	Ficedula_albicollis
ENSGAFG00000019818	p4ha1b	98	67.963	ENSFDAG00000007094	P4HA1	97	68.952	Fukomys_damarensis
ENSGAFG00000019818	p4ha1b	100	92.210	ENSFHEG00000022856	p4ha1b	100	92.391	Fundulus_heteroclitus
ENSGAFG00000019818	p4ha1b	94	78.846	ENSGMOG00000018948	p4ha1b	100	78.269	Gadus_morhua
ENSGAFG00000019818	p4ha1b	98	75.325	ENSGALG00000004325	P4HA1	97	75.810	Gallus_gallus
ENSGAFG00000019818	p4ha1b	96	84.440	ENSGACG00000010233	p4ha1b	97	84.440	Gasterosteus_aculeatus
ENSGAFG00000019818	p4ha1b	98	75.046	ENSGGOG00000015551	P4HA1	96	77.622	Gorilla_gorilla
ENSGAFG00000019818	p4ha1b	100	86.157	ENSHBUG00000015524	p4ha1b	100	86.157	Haplochromis_burtoni
ENSGAFG00000019818	p4ha1b	98	74.492	ENSHGLG00000011764	P4HA1	96	77.622	Heterocephalus_glaber_female
ENSGAFG00000019818	p4ha1b	94	85.465	ENSHCOG00000017152	p4ha1b	100	85.465	Hippocampus_comes
ENSGAFG00000019818	p4ha1b	96	80.000	ENSIPUG00000015157	P4HA1	97	79.810	Ictalurus_punctatus
ENSGAFG00000019818	p4ha1b	98	75.370	ENSSTOG00000027062	P4HA1	97	76.190	Ictidomys_tridecemlineatus
ENSGAFG00000019818	p4ha1b	98	74.954	ENSJJAG00000004232	P4ha1	96	78.322	Jaculus_jaculus
ENSGAFG00000019818	p4ha1b	97	91.791	ENSKMAG00000001588	p4ha1b	100	91.941	Kryptolebias_marmoratus
ENSGAFG00000019818	p4ha1b	100	86.861	ENSLBEG00000018911	p4ha1b	100	86.861	Labrus_bergylta
ENSGAFG00000019818	p4ha1b	96	75.901	ENSLACG00000010202	P4HA1	97	75.901	Latimeria_chalumnae
ENSGAFG00000019818	p4ha1b	99	79.450	ENSLOCG00000008546	p4ha1b	95	80.762	Lepisosteus_oculatus
ENSGAFG00000019818	p4ha1b	98	75.139	ENSLAFG00000002652	P4HA1	97	75.810	Loxodonta_africana
ENSGAFG00000019818	p4ha1b	98	75.046	ENSMFAG00000030507	P4HA1	96	77.622	Macaca_fascicularis
ENSGAFG00000019818	p4ha1b	98	71.904	ENSMMUG00000011274	P4HA1	96	77.622	Macaca_mulatta
ENSGAFG00000019818	p4ha1b	98	73.420	ENSMNEG00000011433	P4HA1	95	75.896	Macaca_nemestrina
ENSGAFG00000019818	p4ha1b	94	71.373	ENSMLEG00000043338	P4HA1	100	84.836	Mandrillus_leucophaeus
ENSGAFG00000019818	p4ha1b	99	89.134	ENSMAMG00000015854	p4ha1b	98	88.952	Mastacembelus_armatus
ENSGAFG00000019818	p4ha1b	100	85.974	ENSMZEG00005027421	p4ha1b	100	85.974	Maylandia_zebra
ENSGAFG00000019818	p4ha1b	98	74.122	ENSMGAG00000005554	P4HA1	100	75.763	Meleagris_gallopavo
ENSGAFG00000019818	p4ha1b	98	60.668	ENSMAUG00000011056	P4ha1	93	68.065	Mesocricetus_auratus
ENSGAFG00000019818	p4ha1b	98	75.370	ENSMICG00000031365	P4HA1	96	77.622	Microcebus_murinus
ENSGAFG00000019818	p4ha1b	98	74.444	ENSMOCG00000017531	P4ha1	96	76.224	Microtus_ochrogaster
ENSGAFG00000019818	p4ha1b	96	86.857	ENSMMOG00000008022	p4ha1b	97	86.857	Mola_mola
ENSGAFG00000019818	p4ha1b	98	76.766	ENSMODG00000000121	P4HA1	96	77.905	Monodelphis_domestica
ENSGAFG00000019818	p4ha1b	100	88.869	ENSMALG00000019674	p4ha1b	100	88.869	Monopterus_albus
ENSGAFG00000019818	p4ha1b	98	74.492	MGP_CAROLIEiJ_G0015342	P4ha1	97	75.429	Mus_caroli
ENSGAFG00000019818	p4ha1b	98	74.307	ENSMUSG00000019916	P4ha1	97	75.429	Mus_musculus
ENSGAFG00000019818	p4ha1b	98	74.492	MGP_PahariEiJ_G0030758	P4ha1	96	76.923	Mus_pahari
ENSGAFG00000019818	p4ha1b	98	74.307	MGP_SPRETEiJ_G0016153	P4ha1	97	75.429	Mus_spretus
ENSGAFG00000019818	p4ha1b	98	75.556	ENSMPUG00000003940	P4HA1	97	76.381	Mustela_putorius_furo
ENSGAFG00000019818	p4ha1b	98	74.907	ENSMLUG00000006548	P4HA1	97	75.810	Myotis_lucifugus
ENSGAFG00000019818	p4ha1b	98	75.370	ENSNGAG00000014487	P4ha1	96	77.622	Nannospalax_galili
ENSGAFG00000019818	p4ha1b	96	85.389	ENSNBRG00000014791	p4ha1b	97	84.571	Neolamprologus_brichardi
ENSGAFG00000019818	p4ha1b	98	66.359	ENSNLEG00000035416	P4HA1	99	82.158	Nomascus_leucogenys
ENSGAFG00000019818	p4ha1b	90	69.106	ENSMEUG00000010326	P4HA1	95	69.106	Notamacropus_eugenii
ENSGAFG00000019818	p4ha1b	98	66.419	ENSOPRG00000000990	P4HA1	97	67.619	Ochotona_princeps
ENSGAFG00000019818	p4ha1b	85	75.896	ENSODEG00000015164	P4HA1	96	78.322	Octodon_degus
ENSGAFG00000019818	p4ha1b	100	86.933	ENSONIG00000000737	p4ha1b	90	87.114	Oreochromis_niloticus
ENSGAFG00000019818	p4ha1b	79	76.674	ENSOANG00000001125	-	100	76.674	Ornithorhynchus_anatinus
ENSGAFG00000019818	p4ha1b	98	74.397	ENSOCUG00000009739	P4HA1	97	75.810	Oryctolagus_cuniculus
ENSGAFG00000019818	p4ha1b	96	86.148	ENSORLG00000005147	p4ha1b	100	86.047	Oryzias_latipes
ENSGAFG00000019818	p4ha1b	100	86.364	ENSORLG00020010911	p4ha1b	100	86.364	Oryzias_latipes_hni
ENSGAFG00000019818	p4ha1b	89	85.216	ENSORLG00015016175	p4ha1b	98	83.740	Oryzias_latipes_hsok
ENSGAFG00000019818	p4ha1b	96	86.717	ENSOMEG00000009962	p4ha1b	97	86.717	Oryzias_melastigma
ENSGAFG00000019818	p4ha1b	98	74.539	ENSOGAG00000003483	P4HA1	97	75.712	Otolemur_garnettii
ENSGAFG00000019818	p4ha1b	98	75.651	ENSOARG00000007348	P4HA1	97	76.571	Ovis_aries
ENSGAFG00000019818	p4ha1b	98	69.485	ENSPPAG00000030135	P4HA1	100	84.836	Pan_paniscus
ENSGAFG00000019818	p4ha1b	98	75.416	ENSPPRG00000002655	P4HA1	97	76.571	Panthera_pardus
ENSGAFG00000019818	p4ha1b	98	75.416	ENSPTIG00000007711	P4HA1	97	76.571	Panthera_tigris_altaica
ENSGAFG00000019818	p4ha1b	98	70.240	ENSPTRG00000002619	P4HA1	96	77.622	Pan_troglodytes
ENSGAFG00000019818	p4ha1b	98	75.046	ENSPANG00000022355	P4HA1	96	77.622	Papio_anubis
ENSGAFG00000019818	p4ha1b	99	80.222	ENSPKIG00000000438	p4ha1b	96	81.870	Paramormyrops_kingsleyae
ENSGAFG00000019818	p4ha1b	99	75.461	ENSPSIG00000016298	P4HA1	97	75.238	Pelodiscus_sinensis
ENSGAFG00000019818	p4ha1b	97	82.798	ENSPMGG00000007593	p4ha1b	96	83.142	Periophthalmus_magnuspinnatus
ENSGAFG00000019818	p4ha1b	98	74.074	ENSPEMG00000006561	P4ha1	96	76.923	Peromyscus_maniculatus_bairdii
ENSGAFG00000019818	p4ha1b	98	76.394	ENSPCIG00000018768	P4HA1	97	77.524	Phascolarctos_cinereus
ENSGAFG00000019818	p4ha1b	100	96.715	ENSPFOG00000018574	p4ha1b	100	96.715	Poecilia_formosa
ENSGAFG00000019818	p4ha1b	100	96.715	ENSPLAG00000012628	p4ha1b	100	96.894	Poecilia_latipinna
ENSGAFG00000019818	p4ha1b	100	96.715	ENSPMEG00000024082	p4ha1b	100	96.715	Poecilia_mexicana
ENSGAFG00000019818	p4ha1b	100	97.263	ENSPREG00000010003	p4ha1b	100	97.263	Poecilia_reticulata
ENSGAFG00000019818	p4ha1b	98	75.046	ENSPPYG00000002348	P4HA1	97	76.000	Pongo_abelii
ENSGAFG00000019818	p4ha1b	94	68.155	ENSPCOG00000017553	P4HA1	100	85.246	Propithecus_coquereli
ENSGAFG00000019818	p4ha1b	98	67.784	ENSPVAG00000012989	P4HA1	97	68.571	Pteropus_vampyrus
ENSGAFG00000019818	p4ha1b	100	86.339	ENSPNYG00000002443	p4ha1b	100	86.339	Pundamilia_nyererei
ENSGAFG00000019818	p4ha1b	99	80.407	ENSPNAG00000023149	p4ha1b	97	82.732	Pygocentrus_nattereri
ENSGAFG00000019818	p4ha1b	98	74.397	ENSRNOG00000050655	P4ha1	97	75.429	Rattus_norvegicus
ENSGAFG00000019818	p4ha1b	98	65.989	ENSRBIG00000035304	P4HA1	97	66.667	Rhinopithecus_bieti
ENSGAFG00000019818	p4ha1b	98	75.185	ENSRROG00000044078	P4HA1	96	77.622	Rhinopithecus_roxellana
ENSGAFG00000019818	p4ha1b	71	73.846	ENSSHAG00000008056	P4HA1	100	73.485	Sarcophilus_harrisii
ENSGAFG00000019818	p4ha1b	99	79.380	ENSSFOG00015009176	p4ha1b	100	80.000	Scleropages_formosus
ENSGAFG00000019818	p4ha1b	99	87.293	ENSSMAG00000019199	p4ha1b	97	87.619	Scophthalmus_maximus
ENSGAFG00000019818	p4ha1b	100	89.416	ENSSDUG00000016587	p4ha1b	100	89.416	Seriola_dumerili
ENSGAFG00000019818	p4ha1b	100	89.416	ENSSLDG00000016261	p4ha1b	100	89.416	Seriola_lalandi_dorsalis
ENSGAFG00000019818	p4ha1b	98	71.985	ENSSARG00000003275	P4HA1	97	72.952	Sorex_araneus
ENSGAFG00000019818	p4ha1b	98	75.741	ENSSPUG00000002624	P4HA1	96	76.571	Sphenodon_punctatus
ENSGAFG00000019818	p4ha1b	85	85.232	ENSSPAG00000011193	p4ha1b	100	85.075	Stegastes_partitus
ENSGAFG00000019818	p4ha1b	98	75.556	ENSSSCG00000010292	P4HA1	97	76.381	Sus_scrofa
ENSGAFG00000019818	p4ha1b	98	75.000	ENSTGUG00000004364	-	97	76.000	Taeniopygia_guttata
ENSGAFG00000019818	p4ha1b	98	87.132	ENSTRUG00000004081	p4ha1b	97	87.358	Takifugu_rubripes
ENSGAFG00000019818	p4ha1b	99	85.820	ENSTNIG00000017021	p4ha1b	97	86.667	Tetraodon_nigroviridis
ENSGAFG00000019818	p4ha1b	98	74.630	ENSTTRG00000009782	P4HA1	96	75.624	Tursiops_truncatus
ENSGAFG00000019818	p4ha1b	98	75.556	ENSUMAG00000009024	P4HA1	97	76.381	Ursus_maritimus
ENSGAFG00000019818	p4ha1b	98	67.100	ENSVPAG00000007253	P4HA1	97	67.424	Vicugna_pacos
ENSGAFG00000019818	p4ha1b	98	75.139	ENSVVUG00000022660	P4HA1	97	76.381	Vulpes_vulpes
ENSGAFG00000019818	p4ha1b	99	69.708	ENSXETG00000006154	p4ha1	96	71.456	Xenopus_tropicalis
ENSGAFG00000019818	p4ha1b	99	97.075	ENSXCOG00000010262	p4ha1b	100	97.075	Xiphophorus_couchianus
ENSGAFG00000019818	p4ha1b	100	97.445	ENSXMAG00000003889	p4ha1b	100	97.445	Xiphophorus_maculatus