EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000019879 (Gene tree)
Gene ID: -
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 8725 bases
Position: chrNHOQ01002007.1:18541-27265
Accession: ZDB-GENE-040426-817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000029484	RRM_1	PF00076.22	2.2e-05	1	1
ENSGAFP00000029482	RRM_1	PF00076.22	2.4e-05	1	1
ENSGAFP00000029484	G-patch	PF01585.23	4.1e-13	1	1
ENSGAFP00000029482	G-patch	PF01585.23	4.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000029786	-	1185	-	ENSGAFP00000029484	394 (aa)	-	-
ENSGAFT00000029784	-	1490	-	ENSGAFP00000029482	404 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019879's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019879	rbm17	100	81.081	ENSG00000134453	RBM17	100	80.344	Homo_sapiens
ENSGAFG00000019879	rbm17	99	93.750	ENSAPOG00000007101	rbm17	99	93.750	Acanthochromis_polyacanthus
ENSGAFG00000019879	rbm17	100	81.327	ENSAMEG00000002107	RBM17	100	80.590	Ailuropoda_melanoleuca
ENSGAFG00000019879	rbm17	100	90.370	ENSACIG00000006251	rbm17	100	90.370	Amphilophus_citrinellus
ENSGAFG00000019879	rbm17	100	94.059	ENSAOCG00000014892	rbm17	100	94.059	Amphiprion_ocellaris
ENSGAFG00000019879	rbm17	100	94.059	ENSAPEG00000022779	rbm17	100	94.059	Amphiprion_percula
ENSGAFG00000019879	rbm17	100	89.074	ENSATEG00000004406	rbm17	100	89.074	Anabas_testudineus
ENSGAFG00000019879	rbm17	100	80.590	ENSAPLG00000004190	RBM17	100	80.590	Anas_platyrhynchos
ENSGAFG00000019879	rbm17	89	77.660	ENSACAG00000005418	RBM17	99	77.660	Anolis_carolinensis
ENSGAFG00000019879	rbm17	100	81.572	ENSANAG00000030127	RBM17	95	88.136	Aotus_nancymaae
ENSGAFG00000019879	rbm17	100	70.792	ENSANAG00000019330	-	95	84.483	Aotus_nancymaae
ENSGAFG00000019879	rbm17	100	90.680	ENSACLG00000003928	rbm17	100	90.428	Astatotilapia_calliptera
ENSGAFG00000019879	rbm17	100	82.921	ENSAMXG00000005853	rbm17	100	82.957	Astyanax_mexicanus
ENSGAFG00000019879	rbm17	100	79.853	ENSBTAG00000011094	-	100	79.115	Bos_taurus
ENSGAFG00000019879	rbm17	100	80.835	ENSBTAG00000021951	RBM17	100	80.098	Bos_taurus
ENSGAFG00000019879	rbm17	74	34.768	WBGene00010233	F58B3.7	97	32.039	Caenorhabditis_elegans
ENSGAFG00000019879	rbm17	100	81.572	ENSCJAG00000020573	RBM17	100	80.835	Callithrix_jacchus
ENSGAFG00000019879	rbm17	100	81.327	ENSCAFG00000005206	RBM17	100	80.590	Canis_familiaris
ENSGAFG00000019879	rbm17	100	79.241	ENSCAFG00020005420	RBM17	100	79.241	Canis_lupus_dingo
ENSGAFG00000019879	rbm17	100	78.624	ENSCHIG00000019921	-	100	77.887	Capra_hircus
ENSGAFG00000019879	rbm17	100	80.835	ENSCHIG00000023204	-	100	80.098	Capra_hircus
ENSGAFG00000019879	rbm17	100	80.732	ENSTSYG00000001165	RBM17	99	87.288	Carlito_syrichta
ENSGAFG00000019879	rbm17	90	68.524	ENSCAPG00000006275	RBM17	100	68.524	Cavia_aperea
ENSGAFG00000019879	rbm17	100	79.648	ENSCPOG00000005679	RBM17	99	78.894	Cavia_porcellus
ENSGAFG00000019879	rbm17	100	81.572	ENSCCAG00000018655	RBM17	95	88.136	Cebus_capucinus
ENSGAFG00000019879	rbm17	100	81.081	ENSCATG00000041566	RBM17	95	88.136	Cercocebus_atys
ENSGAFG00000019879	rbm17	100	80.488	ENSCLAG00000012195	RBM17	99	80.488	Chinchilla_lanigera
ENSGAFG00000019879	rbm17	100	81.081	ENSCSAG00000013564	RBM17	100	80.344	Chlorocebus_sabaeus
ENSGAFG00000019879	rbm17	92	64.362	ENSCHOG00000005131	RBM17	100	63.564	Choloepus_hoffmanni
ENSGAFG00000019879	rbm17	100	81.572	ENSCPBG00000019836	RBM17	100	81.572	Chrysemys_picta_bellii
ENSGAFG00000019879	rbm17	100	46.489	ENSCSAVG00000008782	-	100	45.631	Ciona_savignyi
ENSGAFG00000019879	rbm17	97	73.629	ENSCANG00000023715	-	99	72.589	Colobus_angolensis_palliatus
ENSGAFG00000019879	rbm17	100	80.835	ENSCANG00000030987	RBM17	95	88.136	Colobus_angolensis_palliatus
ENSGAFG00000019879	rbm17	100	80.732	ENSCGRG00001013842	Rbm17	100	80.000	Cricetulus_griseus_chok1gshd
ENSGAFG00000019879	rbm17	100	64.865	ENSCGRG00001009256	-	100	61.179	Cricetulus_griseus_chok1gshd
ENSGAFG00000019879	rbm17	100	80.732	ENSCGRG00000006907	Rbm17	100	80.000	Cricetulus_griseus_crigri
ENSGAFG00000019879	rbm17	100	86.667	ENSCSEG00000018164	rbm17	100	86.667	Cynoglossus_semilaevis
ENSGAFG00000019879	rbm17	100	90.609	ENSCVAG00000002476	rbm17	100	89.848	Cyprinodon_variegatus
ENSGAFG00000019879	rbm17	100	76.359	ENSDARG00000031346	rbm17	100	79.196	Danio_rerio
ENSGAFG00000019879	rbm17	100	81.081	ENSDNOG00000035920	RBM17	100	80.344	Dasypus_novemcinctus
ENSGAFG00000019879	rbm17	99	38.356	FBgn0086683	Spf45	99	38.107	Drosophila_melanogaster
ENSGAFG00000019879	rbm17	88	82.710	ENSETEG00000006642	RBM17	85	82.710	Echinops_telfairi
ENSGAFG00000019879	rbm17	67	69.048	ENSEBUG00000010253	rbm17	88	69.048	Eptatretus_burgeri
ENSGAFG00000019879	rbm17	100	79.699	ENSEASG00005019205	-	100	78.697	Equus_asinus_asinus
ENSGAFG00000019879	rbm17	92	78.989	ENSEASG00005009236	-	100	78.989	Equus_asinus_asinus
ENSGAFG00000019879	rbm17	100	71.646	ENSECAG00000008939	RBM17	100	72.152	Equus_caballus
ENSGAFG00000019879	rbm17	100	71.744	ENSECAG00000001379	-	100	71.744	Equus_caballus
ENSGAFG00000019879	rbm17	86	64.000	ENSEEUG00000013077	RBM17	100	63.143	Erinaceus_europaeus
ENSGAFG00000019879	rbm17	100	82.558	ENSELUG00000006440	rbm17	100	82.558	Esox_lucius
ENSGAFG00000019879	rbm17	100	81.327	ENSFCAG00000031988	RBM17	100	80.590	Felis_catus
ENSGAFG00000019879	rbm17	100	79.607	ENSFALG00000001790	RBM17	100	79.607	Ficedula_albicollis
ENSGAFG00000019879	rbm17	100	80.488	ENSFDAG00000007470	RBM17	100	80.488	Fukomys_damarensis
ENSGAFG00000019879	rbm17	100	93.909	ENSFHEG00000001266	rbm17	100	93.909	Fundulus_heteroclitus
ENSGAFG00000019879	rbm17	99	80.144	ENSGMOG00000008438	rbm17	100	78.947	Gadus_morhua
ENSGAFG00000019879	rbm17	100	80.835	ENSGALG00000006332	RBM17	100	80.835	Gallus_gallus
ENSGAFG00000019879	rbm17	99	89.330	ENSGACG00000019174	rbm17	99	89.330	Gasterosteus_aculeatus
ENSGAFG00000019879	rbm17	100	81.572	ENSGAGG00000019906	RBM17	100	81.572	Gopherus_agassizii
ENSGAFG00000019879	rbm17	100	92.574	ENSHBUG00000016624	rbm17	100	92.574	Haplochromis_burtoni
ENSGAFG00000019879	rbm17	100	80.488	ENSHGLG00000011580	RBM17	100	80.488	Heterocephalus_glaber_female
ENSGAFG00000019879	rbm17	100	66.751	ENSHGLG00100010556	-	100	63.224	Heterocephalus_glaber_male
ENSGAFG00000019879	rbm17	100	80.488	ENSHGLG00100010460	RBM17	100	80.488	Heterocephalus_glaber_male
ENSGAFG00000019879	rbm17	99	86.779	ENSHCOG00000010865	rbm17	100	86.779	Hippocampus_comes
ENSGAFG00000019879	rbm17	100	76.000	ENSIPUG00000007699	Rbm17	100	81.000	Ictalurus_punctatus
ENSGAFG00000019879	rbm17	100	80.732	ENSSTOG00000013591	RBM17	100	80.000	Ictidomys_tridecemlineatus
ENSGAFG00000019879	rbm17	100	80.732	ENSJJAG00000022886	Rbm17	100	80.000	Jaculus_jaculus
ENSGAFG00000019879	rbm17	100	59.214	ENSJJAG00000000993	-	100	58.722	Jaculus_jaculus
ENSGAFG00000019879	rbm17	100	91.184	ENSKMAG00000021400	rbm17	100	91.184	Kryptolebias_marmoratus
ENSGAFG00000019879	rbm17	100	91.832	ENSLBEG00000000881	rbm17	100	88.124	Labrus_bergylta
ENSGAFG00000019879	rbm17	99	64.789	ENSLACG00000017297	RBM17	99	65.023	Latimeria_chalumnae
ENSGAFG00000019879	rbm17	100	82.843	ENSLOCG00000015659	rbm17	100	81.863	Lepisosteus_oculatus
ENSGAFG00000019879	rbm17	100	80.097	ENSLAFG00000011629	RBM17	100	79.369	Loxodonta_africana
ENSGAFG00000019879	rbm17	100	81.081	ENSMFAG00000035521	RBM17	95	88.136	Macaca_fascicularis
ENSGAFG00000019879	rbm17	100	81.081	ENSMMUG00000015152	RBM17	95	88.136	Macaca_mulatta
ENSGAFG00000019879	rbm17	100	81.081	ENSMNEG00000017264	RBM17	95	88.136	Macaca_nemestrina
ENSGAFG00000019879	rbm17	100	81.081	ENSMLEG00000029340	RBM17	95	88.136	Mandrillus_leucophaeus
ENSGAFG00000019879	rbm17	100	88.836	ENSMAMG00000000387	rbm17	100	88.836	Mastacembelus_armatus
ENSGAFG00000019879	rbm17	100	90.680	ENSMZEG00005015179	rbm17	100	90.428	Maylandia_zebra
ENSGAFG00000019879	rbm17	100	79.661	ENSMGAG00000003981	RBM17	100	79.661	Meleagris_gallopavo
ENSGAFG00000019879	rbm17	100	80.732	ENSMAUG00000019247	Rbm17	100	80.000	Mesocricetus_auratus
ENSGAFG00000019879	rbm17	100	75.121	ENSMICG00000041489	-	100	75.121	Microcebus_murinus
ENSGAFG00000019879	rbm17	100	80.732	ENSMICG00000003976	-	100	80.732	Microcebus_murinus
ENSGAFG00000019879	rbm17	93	64.737	ENSMOCG00000014517	-	99	64.737	Microtus_ochrogaster
ENSGAFG00000019879	rbm17	100	80.732	ENSMOCG00000011847	Rbm17	100	80.000	Microtus_ochrogaster
ENSGAFG00000019879	rbm17	100	83.863	ENSMMOG00000010264	rbm17	100	83.863	Mola_mola
ENSGAFG00000019879	rbm17	100	80.835	ENSMODG00000016648	RBM17	100	80.098	Monodelphis_domestica
ENSGAFG00000019879	rbm17	100	88.579	ENSMALG00000010597	rbm17	100	88.579	Monopterus_albus
ENSGAFG00000019879	rbm17	100	80.732	MGP_CAROLIEiJ_G0023173	Rbm17	100	80.732	Mus_caroli
ENSGAFG00000019879	rbm17	100	80.732	ENSMUSG00000037197	Rbm17	100	80.732	Mus_musculus
ENSGAFG00000019879	rbm17	100	80.976	MGP_PahariEiJ_G0019233	Rbm17	100	80.244	Mus_pahari
ENSGAFG00000019879	rbm17	100	80.732	MGP_SPRETEiJ_G0024091	Rbm17	100	80.732	Mus_spretus
ENSGAFG00000019879	rbm17	87	78.933	ENSMPUG00000016359	RBM17	98	78.090	Mustela_putorius_furo
ENSGAFG00000019879	rbm17	100	76.658	ENSMLUG00000025709	-	100	76.167	Myotis_lucifugus
ENSGAFG00000019879	rbm17	100	79.075	ENSMLUG00000002302	-	100	78.345	Myotis_lucifugus
ENSGAFG00000019879	rbm17	100	80.732	ENSNGAG00000000741	Rbm17	100	80.000	Nannospalax_galili
ENSGAFG00000019879	rbm17	100	57.248	ENSNGAG00000000663	-	100	57.002	Nannospalax_galili
ENSGAFG00000019879	rbm17	100	88.071	ENSNBRG00000018148	rbm17	100	88.071	Neolamprologus_brichardi
ENSGAFG00000019879	rbm17	100	81.081	ENSNLEG00000033350	RBM17	95	88.136	Nomascus_leucogenys
ENSGAFG00000019879	rbm17	100	75.676	ENSMEUG00000011347	RBM17	100	74.939	Notamacropus_eugenii
ENSGAFG00000019879	rbm17	100	70.270	ENSOPRG00000002993	RBM17	100	70.270	Ochotona_princeps
ENSGAFG00000019879	rbm17	97	61.616	ENSODEG00000007286	-	99	60.050	Octodon_degus
ENSGAFG00000019879	rbm17	100	80.535	ENSODEG00000004393	RBM17	100	80.535	Octodon_degus
ENSGAFG00000019879	rbm17	100	92.611	ENSONIG00000011838	rbm17	100	92.611	Oreochromis_niloticus
ENSGAFG00000019879	rbm17	100	80.147	ENSOANG00000015455	RBM17	100	80.244	Ornithorhynchus_anatinus
ENSGAFG00000019879	rbm17	100	89.899	ENSORLG00000028798	rbm17	100	89.924	Oryzias_latipes
ENSGAFG00000019879	rbm17	100	89.848	ENSORLG00020004593	rbm17	100	90.102	Oryzias_latipes_hni
ENSGAFG00000019879	rbm17	100	92.327	ENSORLG00015000033	rbm17	100	92.327	Oryzias_latipes_hsok
ENSGAFG00000019879	rbm17	100	88.836	ENSOMEG00000012060	rbm17	100	92.500	Oryzias_melastigma
ENSGAFG00000019879	rbm17	100	80.976	ENSOGAG00000015687	RBM17	100	80.244	Otolemur_garnettii
ENSGAFG00000019879	rbm17	100	80.835	ENSOARG00000012975	RBM17	100	80.098	Ovis_aries
ENSGAFG00000019879	rbm17	100	81.081	ENSPPAG00000032347	RBM17	95	88.136	Pan_paniscus
ENSGAFG00000019879	rbm17	100	81.327	ENSPPRG00000010706	RBM17	100	80.590	Panthera_pardus
ENSGAFG00000019879	rbm17	100	81.327	ENSPTIG00000007596	RBM17	100	80.590	Panthera_tigris_altaica
ENSGAFG00000019879	rbm17	100	81.081	ENSPTRG00000002265	RBM17	95	88.136	Pan_troglodytes
ENSGAFG00000019879	rbm17	100	81.081	ENSPANG00000023425	RBM17	95	88.136	Papio_anubis
ENSGAFG00000019879	rbm17	100	77.722	ENSPKIG00000005048	-	100	77.722	Paramormyrops_kingsleyae
ENSGAFG00000019879	rbm17	100	79.577	ENSPKIG00000025526	rbm17	100	77.752	Paramormyrops_kingsleyae
ENSGAFG00000019879	rbm17	100	80.000	ENSPSIG00000012332	RBM17	100	80.000	Pelodiscus_sinensis
ENSGAFG00000019879	rbm17	100	85.000	ENSPMGG00000007980	rbm17	100	85.250	Periophthalmus_magnuspinnatus
ENSGAFG00000019879	rbm17	100	80.732	ENSPEMG00000014320	Rbm17	100	80.000	Peromyscus_maniculatus_bairdii
ENSGAFG00000019879	rbm17	100	80.440	ENSPCIG00000019260	-	100	79.707	Phascolarctos_cinereus
ENSGAFG00000019879	rbm17	100	93.587	ENSPFOG00000013271	rbm17	100	93.587	Poecilia_formosa
ENSGAFG00000019879	rbm17	100	93.909	ENSPLAG00000004455	rbm17	100	93.909	Poecilia_latipinna
ENSGAFG00000019879	rbm17	100	97.525	ENSPMEG00000014864	rbm17	100	97.525	Poecilia_mexicana
ENSGAFG00000019879	rbm17	100	97.208	ENSPREG00000015589	rbm17	100	97.208	Poecilia_reticulata
ENSGAFG00000019879	rbm17	100	81.081	ENSPPYG00000002067	RBM17	100	80.344	Pongo_abelii
ENSGAFG00000019879	rbm17	81	58.537	ENSPPYG00000019042	-	100	57.927	Pongo_abelii
ENSGAFG00000019879	rbm17	99	61.481	ENSPPYG00000019881	-	100	60.741	Pongo_abelii
ENSGAFG00000019879	rbm17	100	73.710	ENSPCAG00000016879	RBM17	100	72.973	Procavia_capensis
ENSGAFG00000019879	rbm17	100	81.327	ENSPCOG00000027881	RBM17	100	80.590	Propithecus_coquereli
ENSGAFG00000019879	rbm17	100	72.727	ENSPVAG00000015499	RBM17	100	71.990	Pteropus_vampyrus
ENSGAFG00000019879	rbm17	100	82.995	ENSPNYG00000015274	rbm17	100	84.010	Pundamilia_nyererei
ENSGAFG00000019879	rbm17	100	82.742	ENSPNAG00000030046	rbm17	100	83.920	Pygocentrus_nattereri
ENSGAFG00000019879	rbm17	100	80.732	ENSRNOG00000018767	Rbm17	100	80.000	Rattus_norvegicus
ENSGAFG00000019879	rbm17	100	81.081	ENSRBIG00000043727	RBM17	95	88.136	Rhinopithecus_bieti
ENSGAFG00000019879	rbm17	100	81.081	ENSRROG00000044142	RBM17	95	88.136	Rhinopithecus_roxellana
ENSGAFG00000019879	rbm17	100	72.482	ENSSBOG00000023653	-	100	68.447	Saimiri_boliviensis_boliviensis
ENSGAFG00000019879	rbm17	100	81.327	ENSSBOG00000031661	-	93	87.826	Saimiri_boliviensis_boliviensis
ENSGAFG00000019879	rbm17	100	80.835	ENSSHAG00000012480	-	100	80.098	Sarcophilus_harrisii
ENSGAFG00000019879	rbm17	100	81.373	ENSSFOG00015009892	rbm17	100	81.373	Scleropages_formosus
ENSGAFG00000019879	rbm17	100	87.310	ENSSMAG00000012368	rbm17	100	87.056	Scophthalmus_maximus
ENSGAFG00000019879	rbm17	100	89.594	ENSSDUG00000015015	rbm17	100	90.534	Seriola_dumerili
ENSGAFG00000019879	rbm17	100	89.594	ENSSLDG00000014486	rbm17	100	90.534	Seriola_lalandi_dorsalis
ENSGAFG00000019879	rbm17	99	81.034	ENSSPUG00000001036	RBM17	99	80.296	Sphenodon_punctatus
ENSGAFG00000019879	rbm17	100	93.317	ENSSPAG00000002338	rbm17	100	93.317	Stegastes_partitus
ENSGAFG00000019879	rbm17	100	80.835	ENSSSCG00000011134	RBM17	100	80.098	Sus_scrofa
ENSGAFG00000019879	rbm17	100	79.268	ENSTGUG00000002013	RBM17	100	79.268	Taeniopygia_guttata
ENSGAFG00000019879	rbm17	100	90.347	ENSTRUG00000010698	rbm17	100	90.347	Takifugu_rubripes
ENSGAFG00000019879	rbm17	100	88.424	ENSTNIG00000006892	rbm17	100	88.424	Tetraodon_nigroviridis
ENSGAFG00000019879	rbm17	100	62.963	ENSTBEG00000014686	RBM17	100	62.963	Tupaia_belangeri
ENSGAFG00000019879	rbm17	90	79.781	ENSTTRG00000001344	RBM17	100	79.781	Tursiops_truncatus
ENSGAFG00000019879	rbm17	100	79.040	ENSUAMG00000009499	RBM17	100	79.040	Ursus_americanus
ENSGAFG00000019879	rbm17	100	81.327	ENSUMAG00000012237	RBM17	100	80.590	Ursus_maritimus
ENSGAFG00000019879	rbm17	100	69.779	ENSVPAG00000005497	RBM17	100	69.779	Vicugna_pacos
ENSGAFG00000019879	rbm17	100	79.241	ENSVVUG00000006780	RBM17	100	79.241	Vulpes_vulpes
ENSGAFG00000019879	rbm17	99	77.228	ENSXETG00000018123	rbm17	100	76.980	Xenopus_tropicalis
ENSGAFG00000019879	rbm17	100	97.772	ENSXMAG00000008674	rbm17	100	97.772	Xiphophorus_maculatus