EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000019925 (Gene tree)
Gene ID: -
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt-like transcription factor 4
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 8060 bases
Position: chrNHOQ01000244.1:268916-276975
Accession: ZDB-GENE-060328-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000029547	zf-C2H2	PF00096.26	5.2e-32	1	6
ENSGAFP00000029547	zf-C2H2	PF00096.26	5.2e-32	2	6
ENSGAFP00000029547	zf-C2H2	PF00096.26	5.2e-32	3	6
ENSGAFP00000029547	zf-C2H2	PF00096.26	5.2e-32	4	6
ENSGAFP00000029547	zf-C2H2	PF00096.26	5.2e-32	5	6
ENSGAFP00000029547	zf-C2H2	PF00096.26	5.2e-32	6	6
ENSGAFP00000029547	zf-met	PF12874.7	2.8e-14	1	2
ENSGAFP00000029547	zf-met	PF12874.7	2.8e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000029850	-	5977	-	ENSGAFP00000029547	1082 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019925's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019925's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000019925	sall4	57	50.000	ENSGAFG00000013934	-	84	50.000
ENSGAFG00000019925	sall4	62	53.061	ENSGAFG00000012934	-	68	53.061
ENSGAFG00000019925	sall4	59	38.160	ENSGAFG00000014435	-	80	65.385
ENSGAFG00000019925	sall4	62	48.980	ENSGAFG00000012069	-	87	47.170
ENSGAFG00000019925	sall4	61	50.980	ENSGAFG00000011174	-	89	50.980
ENSGAFG00000019925	sall4	96	65.385	ENSGAFG00000009964	sall1a	92	65.385
ENSGAFG00000019925	sall4	89	43.011	ENSGAFG00000001581	sall3a	81	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019925	sall4	100	44.080	ENSG00000101115	SALL4	100	53.333	Homo_sapiens
ENSGAFG00000019925	sall4	100	79.504	ENSAPOG00000002465	sall4	100	78.676	Acanthochromis_polyacanthus
ENSGAFG00000019925	sall4	100	44.512	ENSAMEG00000013250	-	99	45.537	Ailuropoda_melanoleuca
ENSGAFG00000019925	sall4	100	77.001	ENSACIG00000017298	sall4	100	77.001	Amphilophus_citrinellus
ENSGAFG00000019925	sall4	100	80.423	ENSAOCG00000023678	sall4	100	79.779	Amphiprion_ocellaris
ENSGAFG00000019925	sall4	100	80.515	ENSAPEG00000000751	sall4	100	79.871	Amphiprion_percula
ENSGAFG00000019925	sall4	100	78.604	ENSATEG00000024480	sall4	100	78.053	Anabas_testudineus
ENSGAFG00000019925	sall4	100	51.636	ENSAPLG00000006498	SALL4	100	51.901	Anas_platyrhynchos
ENSGAFG00000019925	sall4	100	51.347	ENSACAG00000012748	SALL4	100	51.476	Anolis_carolinensis
ENSGAFG00000019925	sall4	100	44.090	ENSANAG00000023352	SALL4	86	67.308	Aotus_nancymaae
ENSGAFG00000019925	sall4	100	77.298	ENSACLG00000017851	sall4	100	77.298	Astatotilapia_calliptera
ENSGAFG00000019925	sall4	99	64.901	ENSAMXG00000001254	sall4	99	65.610	Astyanax_mexicanus
ENSGAFG00000019925	sall4	100	43.166	ENSBTAG00000003101	SALL4	100	43.674	Bos_taurus
ENSGAFG00000019925	sall4	81	45.674	ENSCJAG00000000591	SALL4	97	45.504	Callithrix_jacchus
ENSGAFG00000019925	sall4	100	45.086	ENSCAFG00000011738	-	100	44.712	Canis_familiaris
ENSGAFG00000019925	sall4	100	45.125	ENSCAFG00020021870	SALL4	100	44.712	Canis_lupus_dingo
ENSGAFG00000019925	sall4	100	43.103	ENSCHIG00000026270	SALL4	100	42.967	Capra_hircus
ENSGAFG00000019925	sall4	100	43.842	ENSTSYG00000007359	SALL4	100	51.837	Carlito_syrichta
ENSGAFG00000019925	sall4	98	44.465	ENSCAPG00000012135	SALL4	97	43.834	Cavia_aperea
ENSGAFG00000019925	sall4	100	40.712	ENSCCAG00000029512	-	100	60.784	Cebus_capucinus
ENSGAFG00000019925	sall4	100	44.069	ENSCATG00000030757	SALL4	86	67.308	Cercocebus_atys
ENSGAFG00000019925	sall4	100	44.035	ENSCLAG00000010479	SALL4	86	65.385	Chinchilla_lanigera
ENSGAFG00000019925	sall4	100	43.990	ENSCSAG00000015269	SALL4	100	44.049	Chlorocebus_sabaeus
ENSGAFG00000019925	sall4	99	51.590	ENSCPBG00000014995	SALL4	99	51.376	Chrysemys_picta_bellii
ENSGAFG00000019925	sall4	100	44.156	ENSCANG00000036463	SALL4	100	43.955	Colobus_angolensis_palliatus
ENSGAFG00000019925	sall4	100	41.740	ENSCGRG00001019569	Sall4	94	54.751	Cricetulus_griseus_chok1gshd
ENSGAFG00000019925	sall4	100	41.476	ENSCGRG00000000462	Sall4	100	79.012	Cricetulus_griseus_crigri
ENSGAFG00000019925	sall4	100	75.821	ENSCSEG00000014604	sall4	100	75.274	Cynoglossus_semilaevis
ENSGAFG00000019925	sall4	100	86.150	ENSCVAG00000010815	sall4	100	86.334	Cyprinodon_variegatus
ENSGAFG00000019925	sall4	99	63.678	ENSDARG00000044485	sall4	99	63.768	Danio_rerio
ENSGAFG00000019925	sall4	100	44.694	ENSDNOG00000040633	SALL4	100	44.840	Dasypus_novemcinctus
ENSGAFG00000019925	sall4	100	42.972	ENSDORG00000012841	Sall4	100	77.027	Dipodomys_ordii
ENSGAFG00000019925	sall4	70	65.385	ENSETEG00000012475	-	57	65.385	Echinops_telfairi
ENSGAFG00000019925	sall4	100	45.613	ENSECAG00000018533	SALL4	100	45.086	Equus_caballus
ENSGAFG00000019925	sall4	100	44.123	ENSEEUG00000003649	SALL4	99	44.032	Erinaceus_europaeus
ENSGAFG00000019925	sall4	100	64.425	ENSELUG00000005696	sall4	100	64.738	Esox_lucius
ENSGAFG00000019925	sall4	100	44.283	ENSFCAG00000002822	SALL4	88	67.308	Felis_catus
ENSGAFG00000019925	sall4	100	51.323	ENSFALG00000013149	SALL4	100	52.205	Ficedula_albicollis
ENSGAFG00000019925	sall4	100	42.142	ENSFDAG00000017812	SALL4	82	63.462	Fukomys_damarensis
ENSGAFG00000019925	sall4	100	87.373	ENSFHEG00000014187	sall4	100	87.373	Fundulus_heteroclitus
ENSGAFG00000019925	sall4	100	69.231	ENSGMOG00000003822	sall4	100	69.231	Gadus_morhua
ENSGAFG00000019925	sall4	100	51.103	ENSGALG00000041365	SALL4	100	51.904	Gallus_gallus
ENSGAFG00000019925	sall4	100	73.655	ENSGACG00000011124	sall4	100	73.564	Gasterosteus_aculeatus
ENSGAFG00000019925	sall4	99	51.451	ENSGAGG00000002297	SALL4	100	51.144	Gopherus_agassizii
ENSGAFG00000019925	sall4	100	44.271	ENSGGOG00000001832	SALL4	86	67.308	Gorilla_gorilla
ENSGAFG00000019925	sall4	100	77.574	ENSHBUG00000007327	sall4	100	77.574	Haplochromis_burtoni
ENSGAFG00000019925	sall4	98	43.971	ENSHGLG00000009043	SALL4	97	43.217	Heterocephalus_glaber_female
ENSGAFG00000019925	sall4	98	43.971	ENSHGLG00100002722	SALL4	97	43.192	Heterocephalus_glaber_male
ENSGAFG00000019925	sall4	100	75.275	ENSHCOG00000008519	sall4	100	75.092	Hippocampus_comes
ENSGAFG00000019925	sall4	99	64.189	ENSIPUG00000019170	sall4	99	64.461	Ictalurus_punctatus
ENSGAFG00000019925	sall4	65	53.333	ENSSTOG00000025002	SALL4	100	84.507	Ictidomys_tridecemlineatus
ENSGAFG00000019925	sall4	100	44.522	ENSJJAG00000020688	Sall4	93	85.915	Jaculus_jaculus
ENSGAFG00000019925	sall4	100	83.457	ENSKMAG00000002501	sall4	100	83.457	Kryptolebias_marmoratus
ENSGAFG00000019925	sall4	100	77.381	ENSLBEG00000019951	sall4	100	76.740	Labrus_bergylta
ENSGAFG00000019925	sall4	96	48.614	ENSLACG00000013898	SALL4	99	58.854	Latimeria_chalumnae
ENSGAFG00000019925	sall4	100	61.343	ENSLOCG00000002427	sall4	100	61.538	Lepisosteus_oculatus
ENSGAFG00000019925	sall4	100	45.240	ENSLAFG00000004309	SALL4	100	45.328	Loxodonta_africana
ENSGAFG00000019925	sall4	100	44.069	ENSMFAG00000027169	SALL4	100	44.041	Macaca_fascicularis
ENSGAFG00000019925	sall4	87	45.968	ENSMMUG00000003870	SALL4	100	53.333	Macaca_mulatta
ENSGAFG00000019925	sall4	87	45.968	ENSMNEG00000035995	SALL4	86	67.308	Macaca_nemestrina
ENSGAFG00000019925	sall4	100	44.156	ENSMLEG00000030467	SALL4	100	44.128	Mandrillus_leucophaeus
ENSGAFG00000019925	sall4	100	78.675	ENSMAMG00000005223	sall4	100	78.131	Mastacembelus_armatus
ENSGAFG00000019925	sall4	100	77.206	ENSMZEG00005023418	sall4	100	77.206	Maylandia_zebra
ENSGAFG00000019925	sall4	75	65.385	ENSMGAG00000009344	SALL4	100	65.385	Meleagris_gallopavo
ENSGAFG00000019925	sall4	100	42.424	ENSMAUG00000015814	Sall4	93	75.904	Mesocricetus_auratus
ENSGAFG00000019925	sall4	100	45.091	ENSMICG00000000027	SALL4	86	67.308	Microcebus_murinus
ENSGAFG00000019925	sall4	100	43.255	ENSMOCG00000018245	Sall4	93	83.562	Microtus_ochrogaster
ENSGAFG00000019925	sall4	100	78.257	ENSMMOG00000014929	sall4	100	78.349	Mola_mola
ENSGAFG00000019925	sall4	99	46.528	ENSMODG00000016387	SALL4	97	46.638	Monodelphis_domestica
ENSGAFG00000019925	sall4	100	81.101	ENSMALG00000018709	sall4	100	80.553	Monopterus_albus
ENSGAFG00000019925	sall4	100	42.440	MGP_CAROLIEiJ_G0024723	Sall4	100	86.111	Mus_caroli
ENSGAFG00000019925	sall4	100	42.634	ENSMUSG00000027547	Sall4	100	86.111	Mus_musculus
ENSGAFG00000019925	sall4	100	41.312	MGP_PahariEiJ_G0026164	Sall4	100	86.111	Mus_pahari
ENSGAFG00000019925	sall4	100	42.634	MGP_SPRETEiJ_G0025643	Sall4	100	86.111	Mus_spretus
ENSGAFG00000019925	sall4	100	44.072	ENSMPUG00000017543	SALL4	96	43.766	Mustela_putorius_furo
ENSGAFG00000019925	sall4	99	34.802	ENSMLUG00000028073	-	99	34.187	Myotis_lucifugus
ENSGAFG00000019925	sall4	98	44.246	ENSMLUG00000007060	-	99	43.939	Myotis_lucifugus
ENSGAFG00000019925	sall4	100	41.927	ENSMLUG00000008405	-	100	41.763	Myotis_lucifugus
ENSGAFG00000019925	sall4	100	43.909	ENSNGAG00000017833	Sall4	84	67.308	Nannospalax_galili
ENSGAFG00000019925	sall4	100	76.541	ENSNBRG00000001829	sall4	100	77.001	Neolamprologus_brichardi
ENSGAFG00000019925	sall4	100	43.972	ENSNLEG00000007013	SALL4	100	43.858	Nomascus_leucogenys
ENSGAFG00000019925	sall4	84	65.385	ENSMEUG00000005793	-	99	65.385	Notamacropus_eugenii
ENSGAFG00000019925	sall4	100	44.803	ENSOPRG00000011640	SALL4	100	44.357	Ochotona_princeps
ENSGAFG00000019925	sall4	100	77.849	ENSONIG00000016557	sall4	100	78.125	Oreochromis_niloticus
ENSGAFG00000019925	sall4	100	52.440	ENSOANG00000008667	SALL4	97	52.113	Ornithorhynchus_anatinus
ENSGAFG00000019925	sall4	98	44.575	ENSOCUG00000011797	SALL4	100	44.115	Oryctolagus_cuniculus
ENSGAFG00000019925	sall4	100	76.824	ENSORLG00000016130	sall4	100	76.824	Oryzias_latipes
ENSGAFG00000019925	sall4	100	76.824	ENSORLG00020007339	sall4	100	76.824	Oryzias_latipes_hni
ENSGAFG00000019925	sall4	100	76.774	ENSORLG00015002265	sall4	100	76.639	Oryzias_latipes_hsok
ENSGAFG00000019925	sall4	100	77.491	ENSOMEG00000017344	sall4	100	77.491	Oryzias_melastigma
ENSGAFG00000019925	sall4	97	45.636	ENSOGAG00000013799	SALL4	100	45.636	Otolemur_garnettii
ENSGAFG00000019925	sall4	100	41.579	ENSOARG00000014570	SALL4	100	41.754	Ovis_aries
ENSGAFG00000019925	sall4	100	44.541	ENSPPAG00000038064	SALL4	86	67.308	Pan_paniscus
ENSGAFG00000019925	sall4	100	44.283	ENSPPRG00000008677	SALL4	88	67.308	Panthera_pardus
ENSGAFG00000019925	sall4	100	44.080	ENSPTRG00000013631	SALL4	86	67.308	Pan_troglodytes
ENSGAFG00000019925	sall4	87	45.968	ENSPANG00000021792	SALL4	86	67.308	Papio_anubis
ENSGAFG00000019925	sall4	100	62.591	ENSPKIG00000007074	sall4	100	62.647	Paramormyrops_kingsleyae
ENSGAFG00000019925	sall4	99	51.681	ENSPSIG00000009066	SALL4	100	51.721	Pelodiscus_sinensis
ENSGAFG00000019925	sall4	100	66.206	ENSPMGG00000022551	sall4	100	66.452	Periophthalmus_magnuspinnatus
ENSGAFG00000019925	sall4	100	42.707	ENSPEMG00000022706	Sall4	100	86.111	Peromyscus_maniculatus_bairdii
ENSGAFG00000019925	sall4	99	48.443	ENSPCIG00000022838	SALL4	97	48.825	Phascolarctos_cinereus
ENSGAFG00000019925	sall4	100	95.568	ENSPFOG00000001442	sall4	100	95.568	Poecilia_formosa
ENSGAFG00000019925	sall4	100	95.476	ENSPLAG00000008760	sall4	100	95.476	Poecilia_latipinna
ENSGAFG00000019925	sall4	100	95.753	ENSPMEG00000008497	sall4	100	95.753	Poecilia_mexicana
ENSGAFG00000019925	sall4	100	95.476	ENSPREG00000021140	sall4	100	95.476	Poecilia_reticulata
ENSGAFG00000019925	sall4	100	43.993	ENSPPYG00000011138	SALL4	100	43.422	Pongo_abelii
ENSGAFG00000019925	sall4	100	42.660	ENSPCAG00000004726	SALL4	99	42.845	Procavia_capensis
ENSGAFG00000019925	sall4	100	44.367	ENSPCOG00000016321	SALL4	82	67.308	Propithecus_coquereli
ENSGAFG00000019925	sall4	94	43.750	ENSPVAG00000002075	SALL4	94	43.367	Pteropus_vampyrus
ENSGAFG00000019925	sall4	100	77.461	ENSPNYG00000021738	sall4	100	77.461	Pundamilia_nyererei
ENSGAFG00000019925	sall4	99	65.636	ENSPNAG00000020929	sall4	99	66.393	Pygocentrus_nattereri
ENSGAFG00000019925	sall4	100	42.845	ENSRNOG00000050035	Sall4	100	42.760	Rattus_norvegicus
ENSGAFG00000019925	sall4	100	44.194	ENSRBIG00000039876	SALL4	100	44.822	Rhinopithecus_bieti
ENSGAFG00000019925	sall4	100	44.281	ENSRROG00000036585	SALL4	100	44.252	Rhinopithecus_roxellana
ENSGAFG00000019925	sall4	100	44.675	ENSSBOG00000030011	SALL4	77	67.308	Saimiri_boliviensis_boliviensis
ENSGAFG00000019925	sall4	96	65.385	ENSSHAG00000018013	SALL4	89	65.385	Sarcophilus_harrisii
ENSGAFG00000019925	sall4	100	62.669	ENSSFOG00015021075	sall4	100	62.759	Scleropages_formosus
ENSGAFG00000019925	sall4	100	78.866	ENSSMAG00000019218	sall4	99	78.866	Scophthalmus_maximus
ENSGAFG00000019925	sall4	100	80.952	ENSSDUG00000004657	sall4	100	80.220	Seriola_dumerili
ENSGAFG00000019925	sall4	100	79.670	ENSSLDG00000004973	sall4	100	79.853	Seriola_lalandi_dorsalis
ENSGAFG00000019925	sall4	100	80.790	ENSSPAG00000001978	sall4	100	80.055	Stegastes_partitus
ENSGAFG00000019925	sall4	100	44.100	ENSSSCG00000007479	SALL4	100	43.879	Sus_scrofa
ENSGAFG00000019925	sall4	100	75.458	ENSTRUG00000007410	sall4	100	74.634	Takifugu_rubripes
ENSGAFG00000019925	sall4	100	73.303	ENSTNIG00000012460	sall4	100	73.670	Tetraodon_nigroviridis
ENSGAFG00000019925	sall4	98	43.545	ENSTTRG00000007753	SALL4	99	43.169	Tursiops_truncatus
ENSGAFG00000019925	sall4	100	44.291	ENSUAMG00000010113	SALL4	100	43.869	Ursus_americanus
ENSGAFG00000019925	sall4	97	44.730	ENSUMAG00000024274	SALL4	97	44.091	Ursus_maritimus
ENSGAFG00000019925	sall4	100	48.891	ENSXETG00000012326	sall4	100	48.709	Xenopus_tropicalis
ENSGAFG00000019925	sall4	100	89.094	ENSXCOG00000015467	sall4	100	89.094	Xiphophorus_couchianus
ENSGAFG00000019925	sall4	100	88.550	ENSXMAG00000012692	sall4	100	88.550	Xiphophorus_maculatus