EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000019994 (Gene tree)
Gene ID: -
Gene Symbol: arl13a
Alias: zgc:73398
Full Name: ADP-ribosylation factor-like 13A
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 13336 bases
Position: chrNHOQ01002284.1:7035434-7048769
Accession: ZDB-GENE-040426-1790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000029663	MMR_HSR1	PF01926.23	1.5e-06	1	1
ENSGAFP00000029661	MMR_HSR1	PF01926.23	1.9e-06	1	1
ENSGAFP00000029659	MMR_HSR1	PF01926.23	2.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000029966	-	1191	-	ENSGAFP00000029663	396 (aa)	-	-
ENSGAFT00000029964	-	1496	-	ENSGAFP00000029661	443 (aa)	-	-
ENSGAFT00000029962	-	1563	-	ENSGAFP00000029659	520 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000019994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000019994's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000019994	arl13a	57	48.018	ENSGAFG00000000025	arl13b	84	48.018

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000019994	arl13a	99	75.188	ENSACIG00000012235	arl13a	100	78.072	Amphilophus_citrinellus
ENSGAFG00000019994	arl13a	94	76.978	ENSAOCG00000024309	arl13a	96	78.708	Amphiprion_ocellaris
ENSGAFG00000019994	arl13a	99	80.317	ENSAPEG00000006626	arl13a	100	81.716	Amphiprion_percula
ENSGAFG00000019994	arl13a	99	80.225	ENSATEG00000018113	arl13a	100	79.775	Anabas_testudineus
ENSGAFG00000019994	arl13a	99	78.030	ENSACLG00000000738	arl13a	100	78.589	Astatotilapia_calliptera
ENSGAFG00000019994	arl13a	99	54.306	ENSAMXG00000021495	arl13a	98	58.711	Astyanax_mexicanus
ENSGAFG00000019994	arl13a	54	50.455	ENSCPBG00000014304	ARL13A	84	49.784	Chrysemys_picta_bellii
ENSGAFG00000019994	arl13a	51	39.801	ENSCGRG00001021947	Arl13a	53	39.801	Cricetulus_griseus_chok1gshd
ENSGAFG00000019994	arl13a	51	39.801	ENSCGRG00000007297	Arl13a	53	39.801	Cricetulus_griseus_crigri
ENSGAFG00000019994	arl13a	99	56.667	ENSCSEG00000002533	arl13a	100	60.808	Cynoglossus_semilaevis
ENSGAFG00000019994	arl13a	100	88.262	ENSCVAG00000005783	arl13a	100	88.262	Cyprinodon_variegatus
ENSGAFG00000019994	arl13a	99	67.120	ENSDARG00000052575	arl13a	99	67.347	Danio_rerio
ENSGAFG00000019994	arl13a	100	88.036	ENSFHEG00000017023	arl13a	100	88.036	Fundulus_heteroclitus
ENSGAFG00000019994	arl13a	99	69.268	ENSGACG00000017318	arl13a	99	73.012	Gasterosteus_aculeatus
ENSGAFG00000019994	arl13a	99	80.952	ENSHBUG00000016100	arl13a	100	81.633	Haplochromis_burtoni
ENSGAFG00000019994	arl13a	99	64.029	ENSHCOG00000005206	arl13a	100	68.660	Hippocampus_comes
ENSGAFG00000019994	arl13a	99	57.179	ENSIPUG00000017720	arl13a	98	60.957	Ictalurus_punctatus
ENSGAFG00000019994	arl13a	99	76.072	ENSKMAG00000001139	arl13a	99	76.072	Kryptolebias_marmoratus
ENSGAFG00000019994	arl13a	100	75.450	ENSLBEG00000028724	arl13a	100	77.201	Labrus_bergylta
ENSGAFG00000019994	arl13a	99	53.571	ENSLOCG00000015307	arl13a	99	52.928	Lepisosteus_oculatus
ENSGAFG00000019994	arl13a	94	72.275	ENSMAMG00000020385	arl13a	100	72.749	Mastacembelus_armatus
ENSGAFG00000019994	arl13a	99	80.952	ENSMZEG00005007052	arl13a	100	81.633	Maylandia_zebra
ENSGAFG00000019994	arl13a	64	33.333	ENSMAUG00000010729	-	71	33.333	Mesocricetus_auratus
ENSGAFG00000019994	arl13a	64	33.333	ENSMAUG00000001355	-	71	33.333	Mesocricetus_auratus
ENSGAFG00000019994	arl13a	98	69.565	ENSMMOG00000000880	arl13a	99	68.798	Mola_mola
ENSGAFG00000019994	arl13a	99	67.259	ENSMALG00000009029	arl13a	100	71.212	Monopterus_albus
ENSGAFG00000019994	arl13a	51	40.686	MGP_CAROLIEiJ_G0033386	Arl13a	53	40.686	Mus_caroli
ENSGAFG00000019994	arl13a	51	41.791	ENSMUSG00000052549	Arl13a	54	41.791	Mus_musculus
ENSGAFG00000019994	arl13a	51	42.289	MGP_PahariEiJ_G0031926	Arl13a	53	42.289	Mus_pahari
ENSGAFG00000019994	arl13a	51	41.791	MGP_SPRETEiJ_G0034551	Arl13a	53	41.791	Mus_spretus
ENSGAFG00000019994	arl13a	99	77.638	ENSNBRG00000021766	arl13a	100	78.195	Neolamprologus_brichardi
ENSGAFG00000019994	arl13a	93	80.529	ENSONIG00000002645	arl13a	100	81.010	Oreochromis_niloticus
ENSGAFG00000019994	arl13a	99	77.027	ENSORLG00000001425	arl13a	100	77.252	Oryzias_latipes
ENSGAFG00000019994	arl13a	99	76.644	ENSORLG00020021844	arl13a	100	77.252	Oryzias_latipes_hni
ENSGAFG00000019994	arl13a	99	77.252	ENSORLG00015011862	arl13a	100	77.477	Oryzias_latipes_hsok
ENSGAFG00000019994	arl13a	99	77.551	ENSOMEG00000015603	arl13a	100	77.928	Oryzias_melastigma
ENSGAFG00000019994	arl13a	99	54.206	ENSPKIG00000013558	arl13a	99	56.512	Paramormyrops_kingsleyae
ENSGAFG00000019994	arl13a	55	52.778	ENSPSIG00000003515	ARL13A	96	52.778	Pelodiscus_sinensis
ENSGAFG00000019994	arl13a	99	60.284	ENSPMGG00000017973	arl13a	100	65.468	Periophthalmus_magnuspinnatus
ENSGAFG00000019994	arl13a	100	94.131	ENSPFOG00000016707	arl13a	100	94.582	Poecilia_formosa
ENSGAFG00000019994	arl13a	100	91.414	ENSPLAG00000011307	arl13a	100	91.414	Poecilia_latipinna
ENSGAFG00000019994	arl13a	100	95.485	ENSPMEG00000017855	arl13a	100	95.485	Poecilia_mexicana
ENSGAFG00000019994	arl13a	100	94.357	ENSPREG00000011435	arl13a	100	94.357	Poecilia_reticulata
ENSGAFG00000019994	arl13a	99	78.283	ENSPNYG00000011485	arl13a	100	78.841	Pundamilia_nyererei
ENSGAFG00000019994	arl13a	51	41.791	ENSRNOG00000055454	Arl13a	51	41.791	Rattus_norvegicus
ENSGAFG00000019994	arl13a	99	54.369	ENSSFOG00015010065	arl13a	99	60.911	Scleropages_formosus
ENSGAFG00000019994	arl13a	99	73.067	ENSSMAG00000013557	arl13a	100	74.519	Scophthalmus_maximus
ENSGAFG00000019994	arl13a	99	73.737	ENSSDUG00000000933	arl13a	100	75.253	Seriola_dumerili
ENSGAFG00000019994	arl13a	99	79.007	ENSSLDG00000009973	arl13a	100	80.135	Seriola_lalandi_dorsalis
ENSGAFG00000019994	arl13a	99	74.112	ENSSPAG00000009109	arl13a	96	81.395	Stegastes_partitus
ENSGAFG00000019994	arl13a	99	90.796	ENSXCOG00000016270	arl13a	99	90.796	Xiphophorus_couchianus
ENSGAFG00000019994	arl13a	100	95.711	ENSXMAG00000013485	arl13a	100	95.711	Xiphophorus_maculatus