EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000020027 (Gene tree)
Gene ID: -
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 2
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 19730 bases
Position: chrNHOQ01002284.1:7071516-7091245
Accession: ZDB-GENE-031118-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000029708	RRM_1	PF00076.22	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000030011	-	6157	-	ENSGAFP00000029708	496 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000020027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000020027's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000020027	cstf2	96	59.520	ENSG00000101811	CSTF2	81	91.257	Homo_sapiens
ENSGAFG00000020027	cstf2	96	86.722	ENSAPOG00000005630	cstf2	96	86.694	Acanthochromis_polyacanthus
ENSGAFG00000020027	cstf2	96	56.788	ENSAMEG00000002082	CSTF2	85	79.920	Ailuropoda_melanoleuca
ENSGAFG00000020027	cstf2	96	81.031	ENSACIG00000012852	cstf2	96	82.062	Amphilophus_citrinellus
ENSGAFG00000020027	cstf2	100	86.573	ENSAOCG00000020905	cstf2	96	87.083	Amphiprion_ocellaris
ENSGAFG00000020027	cstf2	100	86.573	ENSAPEG00000006526	cstf2	96	87.083	Amphiprion_percula
ENSGAFG00000020027	cstf2	100	84.661	ENSATEG00000018186	cstf2	96	84.679	Anabas_testudineus
ENSGAFG00000020027	cstf2	94	57.167	ENSAPLG00000007255	CSTF2	83	80.328	Anas_platyrhynchos
ENSGAFG00000020027	cstf2	97	73.944	ENSANAG00000022342	CSTF2	81	79.920	Aotus_nancymaae
ENSGAFG00000020027	cstf2	100	86.172	ENSACLG00000000779	cstf2	93	85.595	Astatotilapia_calliptera
ENSGAFG00000020027	cstf2	90	89.520	ENSAMXG00000021477	cstf2	72	100.000	Astyanax_mexicanus
ENSGAFG00000020027	cstf2	96	59.348	ENSCJAG00000004422	CSTF2	53	79.920	Callithrix_jacchus
ENSGAFG00000020027	cstf2	96	57.930	ENSCAFG00020007619	CSTF2	81	80.000	Canis_lupus_dingo
ENSGAFG00000020027	cstf2	97	59.083	ENSCPOG00000015255	CSTF2	84	92.157	Cavia_porcellus
ENSGAFG00000020027	cstf2	96	61.279	ENSCCAG00000032975	CSTF2	99	59.928	Cebus_capucinus
ENSGAFG00000020027	cstf2	96	61.896	ENSCATG00000022835	CSTF2	99	59.928	Cercocebus_atys
ENSGAFG00000020027	cstf2	96	59.450	ENSCLAG00000001904	CSTF2	85	90.385	Chinchilla_lanigera
ENSGAFG00000020027	cstf2	97	66.133	ENSCPBG00000014293	CSTF2	66	82.470	Chrysemys_picta_bellii
ENSGAFG00000020027	cstf2	96	61.456	ENSCANG00000030612	CSTF2	99	59.928	Colobus_angolensis_palliatus
ENSGAFG00000020027	cstf2	96	58.574	ENSCGRG00001023023	Cstf2	99	57.586	Cricetulus_griseus_chok1gshd
ENSGAFG00000020027	cstf2	96	60.457	ENSCGRG00000003897	Cstf2	99	59.821	Cricetulus_griseus_crigri
ENSGAFG00000020027	cstf2	96	89.792	ENSCVAG00000005731	cstf2	96	89.375	Cyprinodon_variegatus
ENSGAFG00000020027	cstf2	77	100.000	ENSDARG00000090788	cstf2	68	100.000	Danio_rerio
ENSGAFG00000020027	cstf2	96	60.794	ENSDORG00000007195	Cstf2	83	92.053	Dipodomys_ordii
ENSGAFG00000020027	cstf2	71	84.483	ENSETEG00000004931	CSTF2	50	84.483	Echinops_telfairi
ENSGAFG00000020027	cstf2	88	55.888	ENSFALG00000003859	CSTF2	85	78.704	Ficedula_albicollis
ENSGAFG00000020027	cstf2	97	74.296	ENSFDAG00000002416	CSTF2	81	79.920	Fukomys_damarensis
ENSGAFG00000020027	cstf2	95	89.706	ENSFHEG00000017065	cstf2	92	87.605	Fundulus_heteroclitus
ENSGAFG00000020027	cstf2	96	71.779	ENSGMOG00000005145	cstf2	99	73.608	Gadus_morhua
ENSGAFG00000020027	cstf2	97	60.136	ENSGALG00000006760	CSTF2	88	82.213	Gallus_gallus
ENSGAFG00000020027	cstf2	98	72.453	ENSGACG00000017326	cstf2	98	71.512	Gasterosteus_aculeatus
ENSGAFG00000020027	cstf2	97	58.469	ENSGAGG00000006037	CSTF2	88	81.176	Gopherus_agassizii
ENSGAFG00000020027	cstf2	96	61.456	ENSGGOG00000022267	CSTF2	99	59.928	Gorilla_gorilla
ENSGAFG00000020027	cstf2	100	86.228	ENSHBUG00000016183	cstf2	93	86.100	Haplochromis_burtoni
ENSGAFG00000020027	cstf2	96	59.215	ENSHGLG00000000659	-	86	88.889	Heterocephalus_glaber_female
ENSGAFG00000020027	cstf2	96	59.215	ENSHGLG00100001130	-	86	88.889	Heterocephalus_glaber_male
ENSGAFG00000020027	cstf2	96	82.025	ENSHCOG00000005157	cstf2	97	83.023	Hippocampus_comes
ENSGAFG00000020027	cstf2	96	59.655	ENSSTOG00000023445	CSTF2	85	90.385	Ictidomys_tridecemlineatus
ENSGAFG00000020027	cstf2	96	58.603	ENSJJAG00000020507	Cstf2	85	90.385	Jaculus_jaculus
ENSGAFG00000020027	cstf2	100	83.929	ENSKMAG00000001068	cstf2	96	86.392	Kryptolebias_marmoratus
ENSGAFG00000020027	cstf2	67	93.671	ENSLBEG00000028720	cstf2	87	96.610	Labrus_bergylta
ENSGAFG00000020027	cstf2	96	58.549	ENSLAFG00000000474	CSTF2	85	80.000	Loxodonta_africana
ENSGAFG00000020027	cstf2	96	61.456	ENSMFAG00000043888	CSTF2	99	59.928	Macaca_fascicularis
ENSGAFG00000020027	cstf2	96	61.456	ENSMMUG00000013008	CSTF2	99	59.928	Macaca_mulatta
ENSGAFG00000020027	cstf2	96	61.456	ENSMNEG00000041824	CSTF2	99	59.928	Macaca_nemestrina
ENSGAFG00000020027	cstf2	96	61.456	ENSMLEG00000036870	CSTF2	99	59.928	Mandrillus_leucophaeus
ENSGAFG00000020027	cstf2	94	86.567	ENSMAMG00000020364	cstf2	96	86.141	Mastacembelus_armatus
ENSGAFG00000020027	cstf2	100	86.172	ENSMZEG00005007200	cstf2	96	85.595	Maylandia_zebra
ENSGAFG00000020027	cstf2	90	71.951	ENSMGAG00000004139	CSTF2	50	79.535	Meleagris_gallopavo
ENSGAFG00000020027	cstf2	96	76.727	ENSMICG00000014121	CSTF2	88	81.124	Microcebus_murinus
ENSGAFG00000020027	cstf2	96	59.107	ENSMOCG00000008081	Cstf2	88	79.920	Microtus_ochrogaster
ENSGAFG00000020027	cstf2	100	72.946	ENSMMOG00000000538	cstf2	96	72.234	Mola_mola
ENSGAFG00000020027	cstf2	96	75.445	MGP_CAROLIEiJ_G0033383	Cstf2	85	91.026	Mus_caroli
ENSGAFG00000020027	cstf2	96	60.461	ENSMUSG00000031256	Cstf2	85	91.026	Mus_musculus
ENSGAFG00000020027	cstf2	96	75.445	MGP_PahariEiJ_G0031923	Cstf2	81	81.526	Mus_pahari
ENSGAFG00000020027	cstf2	96	75.801	MGP_SPRETEiJ_G0034548	Cstf2	85	91.026	Mus_spretus
ENSGAFG00000020027	cstf2	96	55.940	ENSMPUG00000002339	CSTF2	81	79.920	Mustela_putorius_furo
ENSGAFG00000020027	cstf2	96	55.365	ENSMLUG00000004598	CSTF2	79	78.884	Myotis_lucifugus
ENSGAFG00000020027	cstf2	92	74.737	ENSNBRG00000021694	cstf2	100	75.579	Neolamprologus_brichardi
ENSGAFG00000020027	cstf2	96	61.279	ENSNLEG00000007510	CSTF2	99	59.747	Nomascus_leucogenys
ENSGAFG00000020027	cstf2	83	75.127	ENSOPRG00000003106	CSTF2	79	75.127	Ochotona_princeps
ENSGAFG00000020027	cstf2	92	91.463	ENSONIG00000002631	cstf2	81	90.800	Oreochromis_niloticus
ENSGAFG00000020027	cstf2	96	59.655	ENSOCUG00000010468	CSTF2	88	80.723	Oryctolagus_cuniculus
ENSGAFG00000020027	cstf2	96	82.609	ENSORLG00000001380	cstf2	96	83.023	Oryzias_latipes
ENSGAFG00000020027	cstf2	96	82.609	ENSORLG00020021917	cstf2	96	83.023	Oryzias_latipes_hni
ENSGAFG00000020027	cstf2	96	82.816	ENSORLG00015011996	cstf2	96	83.230	Oryzias_latipes_hsok
ENSGAFG00000020027	cstf2	100	83.929	ENSOMEG00000015507	cstf2	96	84.536	Oryzias_melastigma
ENSGAFG00000020027	cstf2	96	54.957	ENSOGAG00000011192	CSTF2	81	79.435	Otolemur_garnettii
ENSGAFG00000020027	cstf2	96	61.456	ENSPPAG00000031804	CSTF2	99	59.928	Pan_paniscus
ENSGAFG00000020027	cstf2	96	61.456	ENSPTRG00000022090	CSTF2	99	59.928	Pan_troglodytes
ENSGAFG00000020027	cstf2	96	61.456	ENSPANG00000002303	CSTF2	81	79.920	Papio_anubis
ENSGAFG00000020027	cstf2	100	71.456	ENSPKIG00000005033	cstf2	93	72.455	Paramormyrops_kingsleyae
ENSGAFG00000020027	cstf2	96	84.792	ENSPMGG00000006534	cstf2	96	84.792	Periophthalmus_magnuspinnatus
ENSGAFG00000020027	cstf2	96	58.773	ENSPEMG00000019415	Cstf2	88	80.723	Peromyscus_maniculatus_bairdii
ENSGAFG00000020027	cstf2	94	59.115	ENSPCIG00000002989	CSTF2	85	84.426	Phascolarctos_cinereus
ENSGAFG00000020027	cstf2	96	92.153	ENSPLAG00000011176	cstf2	96	91.751	Poecilia_latipinna
ENSGAFG00000020027	cstf2	96	92.929	ENSPMEG00000017743	cstf2	96	92.727	Poecilia_mexicana
ENSGAFG00000020027	cstf2	63	90.332	ENSPREG00000011481	cstf2	97	83.054	Poecilia_reticulata
ENSGAFG00000020027	cstf2	97	60.247	ENSPCOG00000027744	CSTF2	99	59.313	Propithecus_coquereli
ENSGAFG00000020027	cstf2	93	47.972	ENSPVAG00000008342	CSTF2	88	54.468	Pteropus_vampyrus
ENSGAFG00000020027	cstf2	100	78.210	ENSPNYG00000010852	cstf2	94	93.151	Pundamilia_nyererei
ENSGAFG00000020027	cstf2	97	61.062	ENSRBIG00000030745	CSTF2	99	59.891	Rhinopithecus_bieti
ENSGAFG00000020027	cstf2	96	61.456	ENSRROG00000045042	CSTF2	99	59.928	Rhinopithecus_roxellana
ENSGAFG00000020027	cstf2	96	61.279	ENSSBOG00000021649	CSTF2	81	79.920	Saimiri_boliviensis_boliviensis
ENSGAFG00000020027	cstf2	86	82.692	ENSSHAG00000003681	CSTF2	84	84.483	Sarcophilus_harrisii
ENSGAFG00000020027	cstf2	96	71.923	ENSSFOG00015006348	cstf2	82	90.000	Scleropages_formosus
ENSGAFG00000020027	cstf2	100	81.746	ENSSMAG00000013463	cstf2	96	84.948	Scophthalmus_maximus
ENSGAFG00000020027	cstf2	50	82.283	ENSSPUG00000005288	-	53	82.731	Sphenodon_punctatus
ENSGAFG00000020027	cstf2	96	59.930	ENSSSCG00000012486	CSTF2	52	81.743	Sus_scrofa
ENSGAFG00000020027	cstf2	97	59.396	ENSTGUG00000002253	CSTF2	88	81.569	Taeniopygia_guttata
ENSGAFG00000020027	cstf2	97	76.265	ENSTNIG00000016860	cstf2	99	73.489	Tetraodon_nigroviridis
ENSGAFG00000020027	cstf2	54	98.780	ENSTBEG00000010029	-	61	98.780	Tupaia_belangeri
ENSGAFG00000020027	cstf2	96	58.904	ENSUAMG00000026605	CSTF2	88	79.920	Ursus_americanus
ENSGAFG00000020027	cstf2	91	75.000	ENSUMAG00000012417	CSTF2	80	79.518	Ursus_maritimus
ENSGAFG00000020027	cstf2	73	68.358	ENSVPAG00000006466	CSTF2	54	80.498	Vicugna_pacos
ENSGAFG00000020027	cstf2	85	82.353	ENSXETG00000009642	cstf2	86	82.353	Xenopus_tropicalis
ENSGAFG00000020027	cstf2	96	73.245	ENSXCOG00000016436	cstf2	98	98.824	Xiphophorus_couchianus
ENSGAFG00000020027	cstf2	63	98.071	ENSXMAG00000013524	cstf2	96	89.041	Xiphophorus_maculatus