EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000020056 (Gene tree)
Gene ID: -
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 5612 bases
Position: chrNHOQ01002284.1:7198248-7203859
Accession: ZDB-GENE-060825-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000029748	MTS	PF05175.14	4.4e-05	1	1
ENSGAFP00000029748	Met_10	PF02475.16	1.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000030052	-	1900	-	ENSGAFP00000029748	401 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000020056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000020056's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000020056	trmt12	96	49.637	ENSG00000183665	TRMT12	79	65.625	Homo_sapiens
ENSGAFG00000020056	trmt12	100	74.194	ENSAPOG00000011979	trmt12	100	74.194	Acanthochromis_polyacanthus
ENSGAFG00000020056	trmt12	96	50.363	ENSAMEG00000019612	TRMT12	92	50.363	Ailuropoda_melanoleuca
ENSGAFG00000020056	trmt12	95	74.935	ENSACIG00000012982	trmt12	99	74.935	Amphilophus_citrinellus
ENSGAFG00000020056	trmt12	100	74.876	ENSAOCG00000020570	trmt12	100	74.876	Amphiprion_ocellaris
ENSGAFG00000020056	trmt12	100	74.627	ENSAPEG00000006335	trmt12	100	74.627	Amphiprion_percula
ENSGAFG00000020056	trmt12	100	72.099	ENSATEG00000018316	trmt12	100	72.099	Anabas_testudineus
ENSGAFG00000020056	trmt12	100	73.201	ENSACLG00000001008	trmt12	100	73.201	Astatotilapia_calliptera
ENSGAFG00000020056	trmt12	99	55.714	ENSAMXG00000040366	trmt12	99	55.714	Astyanax_mexicanus
ENSGAFG00000020056	trmt12	96	50.000	ENSBTAG00000020398	TRMT12	89	50.000	Bos_taurus
ENSGAFG00000020056	trmt12	96	48.537	ENSCJAG00000022174	TRMT12	92	48.537	Callithrix_jacchus
ENSGAFG00000020056	trmt12	96	49.879	ENSCAFG00000001040	TRMT12	94	49.879	Canis_familiaris
ENSGAFG00000020056	trmt12	96	49.879	ENSCAFG00020006500	TRMT12	94	49.879	Canis_lupus_dingo
ENSGAFG00000020056	trmt12	96	49.272	ENSCHIG00000016574	TRMT12	94	49.272	Capra_hircus
ENSGAFG00000020056	trmt12	97	49.635	ENSCPOG00000026520	TRMT12	93	49.635	Cavia_porcellus
ENSGAFG00000020056	trmt12	96	49.153	ENSCSAG00000018615	TRMT12	92	49.153	Chlorocebus_sabaeus
ENSGAFG00000020056	trmt12	97	51.294	ENSCPBG00000014290	TRMT12	93	51.294	Chrysemys_picta_bellii
ENSGAFG00000020056	trmt12	71	47.079	ENSCING00000019633	-	97	47.079	Ciona_intestinalis
ENSGAFG00000020056	trmt12	72	47.079	ENSCSAVG00000000415	-	91	47.079	Ciona_savignyi
ENSGAFG00000020056	trmt12	97	47.880	ENSCGRG00001014834	Trmt12	95	48.379	Cricetulus_griseus_chok1gshd
ENSGAFG00000020056	trmt12	99	65.196	ENSCSEG00000002675	trmt12	95	65.196	Cynoglossus_semilaevis
ENSGAFG00000020056	trmt12	100	78.358	ENSCVAG00000005590	trmt12	100	78.358	Cyprinodon_variegatus
ENSGAFG00000020056	trmt12	99	56.265	ENSDARG00000060338	trmt12	99	56.265	Danio_rerio
ENSGAFG00000020056	trmt12	96	46.973	ENSETEG00000009373	TRMT12	92	46.973	Echinops_telfairi
ENSGAFG00000020056	trmt12	96	50.363	ENSEASG00005022441	TRMT12	94	50.363	Equus_asinus_asinus
ENSGAFG00000020056	trmt12	97	48.544	ENSEEUG00000004844	TRMT12	93	48.544	Erinaceus_europaeus
ENSGAFG00000020056	trmt12	99	61.330	ENSELUG00000004240	trmt12	99	62.634	Esox_lucius
ENSGAFG00000020056	trmt12	66	54.577	ENSFALG00000003825	TRMT12	93	61.765	Ficedula_albicollis
ENSGAFG00000020056	trmt12	96	49.153	ENSFDAG00000016647	TRMT12	94	49.153	Fukomys_damarensis
ENSGAFG00000020056	trmt12	93	70.213	ENSFHEG00000017338	trmt12	96	70.213	Fundulus_heteroclitus
ENSGAFG00000020056	trmt12	81	55.331	ENSGALG00000006773	TRMT12	76	55.331	Gallus_gallus
ENSGAFG00000020056	trmt12	96	69.091	ENSGACG00000017351	trmt12	100	69.091	Gasterosteus_aculeatus
ENSGAFG00000020056	trmt12	97	51.422	ENSGAGG00000006032	TRMT12	95	51.422	Gopherus_agassizii
ENSGAFG00000020056	trmt12	100	73.201	ENSHBUG00000016412	trmt12	100	73.201	Haplochromis_burtoni
ENSGAFG00000020056	trmt12	96	48.426	ENSHGLG00000020498	TRMT12	94	48.426	Heterocephalus_glaber_female
ENSGAFG00000020056	trmt12	96	48.668	ENSHGLG00100020132	TRMT12	94	48.668	Heterocephalus_glaber_male
ENSGAFG00000020056	trmt12	100	65.835	ENSHCOG00000005050	trmt12	100	65.835	Hippocampus_comes
ENSGAFG00000020056	trmt12	99	55.392	ENSIPUG00000018011	trmt12	92	55.392	Ictalurus_punctatus
ENSGAFG00000020056	trmt12	97	48.916	ENSSTOG00000030617	TRMT12	94	48.675	Ictidomys_tridecemlineatus
ENSGAFG00000020056	trmt12	99	74.378	ENSKMAG00000000891	trmt12	99	74.378	Kryptolebias_marmoratus
ENSGAFG00000020056	trmt12	54	72.936	ENSLBEG00000017456	-	89	72.936	Labrus_bergylta
ENSGAFG00000020056	trmt12	100	65.686	ENSLBEG00000028712	trmt12	100	65.686	Labrus_bergylta
ENSGAFG00000020056	trmt12	97	49.642	ENSLACG00000015869	TRMT12	94	49.642	Latimeria_chalumnae
ENSGAFG00000020056	trmt12	99	55.172	ENSLOCG00000015290	trmt12	99	55.172	Lepisosteus_oculatus
ENSGAFG00000020056	trmt12	96	49.879	ENSLAFG00000012519	TRMT12	94	49.879	Loxodonta_africana
ENSGAFG00000020056	trmt12	96	48.910	ENSMMUG00000015490	TRMT12	93	48.910	Macaca_mulatta
ENSGAFG00000020056	trmt12	99	70.545	ENSMAMG00000020311	trmt12	99	70.545	Mastacembelus_armatus
ENSGAFG00000020056	trmt12	100	73.449	ENSMZEG00005007349	trmt12	100	73.449	Maylandia_zebra
ENSGAFG00000020056	trmt12	99	50.119	ENSMGAG00000004174	TRMT12	95	50.119	Meleagris_gallopavo
ENSGAFG00000020056	trmt12	99	69.727	ENSMMOG00000000412	trmt12	99	69.727	Mola_mola
ENSGAFG00000020056	trmt12	96	50.995	ENSMODG00000021403	-	92	50.995	Monodelphis_domestica
ENSGAFG00000020056	trmt12	97	49.015	ENSMODG00000011798	-	84	49.015	Monodelphis_domestica
ENSGAFG00000020056	trmt12	100	73.399	ENSMALG00000008668	trmt12	100	73.399	Monopterus_albus
ENSGAFG00000020056	trmt12	96	48.786	MGP_CAROLIEiJ_G0019820	Trmt12	93	48.786	Mus_caroli
ENSGAFG00000020056	trmt12	96	49.029	ENSMUSG00000037085	Trmt12	92	49.029	Mus_musculus
ENSGAFG00000020056	trmt12	96	49.272	MGP_PahariEiJ_G0019829	Trmt12	93	49.272	Mus_pahari
ENSGAFG00000020056	trmt12	96	48.786	MGP_SPRETEiJ_G0020717	Trmt12	92	48.786	Mus_spretus
ENSGAFG00000020056	trmt12	96	49.398	ENSMPUG00000019150	TRMT12	93	49.398	Mustela_putorius_furo
ENSGAFG00000020056	trmt12	96	49.157	ENSMLUG00000003753	TRMT12	94	49.157	Myotis_lucifugus
ENSGAFG00000020056	trmt12	97	47.585	ENSNGAG00000014548	Trmt12	95	47.585	Nannospalax_galili
ENSGAFG00000020056	trmt12	100	73.383	ENSNBRG00000021510	trmt12	100	73.383	Neolamprologus_brichardi
ENSGAFG00000020056	trmt12	96	45.521	ENSOPRG00000008067	TRMT12	92	45.521	Ochotona_princeps
ENSGAFG00000020056	trmt12	96	49.153	ENSODEG00000018933	TRMT12	94	49.153	Octodon_degus
ENSGAFG00000020056	trmt12	100	74.194	ENSONIG00000002614	trmt12	100	74.194	Oreochromis_niloticus
ENSGAFG00000020056	trmt12	96	44.717	ENSOANG00000009987	TRMT12	95	44.717	Ornithorhynchus_anatinus
ENSGAFG00000020056	trmt12	80	53.659	ENSOCUG00000026379	TRMT12	73	53.659	Oryctolagus_cuniculus
ENSGAFG00000020056	trmt12	100	69.900	ENSORLG00000001280	trmt12	100	71.144	Oryzias_latipes
ENSGAFG00000020056	trmt12	100	69.652	ENSORLG00020000708	trmt12	100	70.896	Oryzias_latipes_hni
ENSGAFG00000020056	trmt12	100	70.896	ENSORLG00015012344	trmt12	100	70.896	Oryzias_latipes_hsok
ENSGAFG00000020056	trmt12	100	67.910	ENSOMEG00000015267	trmt12	98	67.910	Oryzias_melastigma
ENSGAFG00000020056	trmt12	97	48.798	ENSOGAG00000015845	TRMT12	94	48.798	Otolemur_garnettii
ENSGAFG00000020056	trmt12	99	58.128	ENSPKIG00000004640	trmt12	99	58.128	Paramormyrops_kingsleyae
ENSGAFG00000020056	trmt12	59	57.778	ENSPSIG00000003476	TRMT12	99	57.778	Pelodiscus_sinensis
ENSGAFG00000020056	trmt12	99	62.035	ENSPMGG00000016356	trmt12	97	62.035	Periophthalmus_magnuspinnatus
ENSGAFG00000020056	trmt12	96	50.746	ENSPCIG00000002967	TRMT12	85	50.746	Phascolarctos_cinereus
ENSGAFG00000020056	trmt12	96	90.104	ENSPFOG00000016931	trmt12	94	90.104	Poecilia_formosa
ENSGAFG00000020056	trmt12	100	88.529	ENSPLAG00000020621	trmt12	100	88.529	Poecilia_latipinna
ENSGAFG00000020056	trmt12	100	91.771	ENSPMEG00000000818	trmt12	100	91.771	Poecilia_mexicana
ENSGAFG00000020056	trmt12	100	89.027	ENSPREG00000011621	trmt12	100	89.526	Poecilia_reticulata
ENSGAFG00000020056	trmt12	96	49.395	ENSPPYG00000018866	TRMT12	92	49.395	Pongo_abelii
ENSGAFG00000020056	trmt12	97	48.792	ENSPCAG00000000556	TRMT12	93	48.792	Procavia_capensis
ENSGAFG00000020056	trmt12	96	49.395	ENSPVAG00000009149	TRMT12	93	49.395	Pteropus_vampyrus
ENSGAFG00000020056	trmt12	95	73.107	ENSPNYG00000010696	trmt12	99	73.107	Pundamilia_nyererei
ENSGAFG00000020056	trmt12	99	54.415	ENSPNAG00000019028	trmt12	99	54.415	Pygocentrus_nattereri
ENSGAFG00000020056	trmt12	96	49.029	ENSRNOG00000008978	Trmt12	94	49.029	Rattus_norvegicus
ENSGAFG00000020056	trmt12	96	50.498	ENSSHAG00000003345	TRMT12	92	50.498	Sarcophilus_harrisii
ENSGAFG00000020056	trmt12	99	53.846	ENSSFOG00015006090	trmt12	99	53.846	Scleropages_formosus
ENSGAFG00000020056	trmt12	99	74.194	ENSSMAG00000013247	trmt12	99	74.194	Scophthalmus_maximus
ENSGAFG00000020056	trmt12	100	75.556	ENSSDUG00000006168	trmt12	100	75.556	Seriola_dumerili
ENSGAFG00000020056	trmt12	100	75.062	ENSSLDG00000025007	trmt12	100	75.062	Seriola_lalandi_dorsalis
ENSGAFG00000020056	trmt12	97	50.000	ENSSPUG00000005321	TRMT12	93	50.000	Sphenodon_punctatus
ENSGAFG00000020056	trmt12	100	75.186	ENSSPAG00000009435	trmt12	97	75.186	Stegastes_partitus
ENSGAFG00000020056	trmt12	99	46.506	ENSTGUG00000002280	TRMT12	99	47.711	Taeniopygia_guttata
ENSGAFG00000020056	trmt12	99	66.418	ENSTRUG00000011548	trmt12	99	66.418	Takifugu_rubripes
ENSGAFG00000020056	trmt12	99	64.109	ENSTNIG00000016866	trmt12	99	64.109	Tetraodon_nigroviridis
ENSGAFG00000020056	trmt12	96	49.398	ENSUAMG00000002067	TRMT12	95	49.398	Ursus_americanus
ENSGAFG00000020056	trmt12	96	48.916	ENSVPAG00000006519	TRMT12	93	48.916	Vicugna_pacos
ENSGAFG00000020056	trmt12	96	48.910	ENSVVUG00000016790	TRMT12	93	48.910	Vulpes_vulpes
ENSGAFG00000020056	trmt12	99	50.125	ENSXETG00000009641	trmt12	95	50.125	Xenopus_tropicalis
ENSGAFG00000020056	trmt12	100	93.564	ENSXCOG00000016505	trmt12	100	93.564	Xiphophorus_couchianus
ENSGAFG00000020056	trmt12	100	94.776	ENSXMAG00000025318	trmt12	100	94.776	Xiphophorus_maculatus