EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000020102 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: si:dkey-13a21.4
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 4011 bases
Position: chrNHOQ01002390.1:2757786-2761796
Accession: ZDB-GENE-040724-163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000029814	MMR_HSR1	PF01926.23	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000030118	-	2828	-	ENSGAFP00000029814	204 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000020102's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000020102's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000020102	si:dkey-13a21.4	80	36.970	ENSGAFG00000001289	rab1ab	79	36.970
ENSGAFG00000020102	si:dkey-13a21.4	68	33.571	ENSGAFG00000000629	RAB29	68	33.571
ENSGAFG00000020102	si:dkey-13a21.4	77	37.267	ENSGAFG00000008183	si:dkey-34d22.5	71	37.267
ENSGAFG00000020102	si:dkey-13a21.4	97	51.244	ENSGAFG00000020476	RAB7A	97	51.244
ENSGAFG00000020102	si:dkey-13a21.4	77	36.250	ENSGAFG00000016549	rab11a	72	36.250
ENSGAFG00000020102	si:dkey-13a21.4	77	31.210	ENSGAFG00000005188	rabl2	67	31.210
ENSGAFG00000020102	si:dkey-13a21.4	71	31.034	ENSGAFG00000021814	hrasb	80	32.051
ENSGAFG00000020102	si:dkey-13a21.4	90	38.919	ENSGAFG00000020309	rab30	95	38.919
ENSGAFG00000020102	si:dkey-13a21.4	80	35.928	ENSGAFG00000021725	rab11al	75	35.928
ENSGAFG00000020102	si:dkey-13a21.4	84	35.838	ENSGAFG00000021724	rab25b	81	35.838
ENSGAFG00000020102	si:dkey-13a21.4	79	35.366	ENSGAFG00000014730	-	79	35.366
ENSGAFG00000020102	si:dkey-13a21.4	83	52.047	ENSGAFG00000004099	rab9b	76	52.047
ENSGAFG00000020102	si:dkey-13a21.4	79	34.969	ENSGAFG00000006846	rab2a	75	34.969
ENSGAFG00000020102	si:dkey-13a21.4	80	35.152	ENSGAFG00000019305	rab1ba	80	35.152
ENSGAFG00000020102	si:dkey-13a21.4	76	39.355	ENSGAFG00000002790	rab18a	75	39.355
ENSGAFG00000020102	si:dkey-13a21.4	79	35.583	ENSGAFG00000011619	rab5aa	74	35.583
ENSGAFG00000020102	si:dkey-13a21.4	80	36.970	ENSGAFG00000000918	-	80	36.970
ENSGAFG00000020102	si:dkey-13a21.4	88	33.880	ENSGAFG00000012579	rab34a	68	33.880
ENSGAFG00000020102	si:dkey-13a21.4	89	33.514	ENSGAFG00000015135	rab36	71	33.514
ENSGAFG00000020102	si:dkey-13a21.4	77	37.500	ENSGAFG00000004604	RAB39B	74	37.500
ENSGAFG00000020102	si:dkey-13a21.4	78	35.000	ENSGAFG00000011713	rab25a	90	41.333
ENSGAFG00000020102	si:dkey-13a21.4	81	52.410	ENSGAFG00000000591	rab9a	76	52.410
ENSGAFG00000020102	si:dkey-13a21.4	74	30.263	ENSGAFG00000010541	rras	84	31.395
ENSGAFG00000020102	si:dkey-13a21.4	79	33.742	ENSGAFG00000003642	-	71	33.742
ENSGAFG00000020102	si:dkey-13a21.4	99	34.450	ENSGAFG00000019872	rab41	97	34.450
ENSGAFG00000020102	si:dkey-13a21.4	96	32.836	ENSGAFG00000010916	rab6bb	94	32.836
ENSGAFG00000020102	si:dkey-13a21.4	96	33.333	ENSGAFG00000017270	rab6ba	94	33.333
ENSGAFG00000020102	si:dkey-13a21.4	83	35.882	ENSGAFG00000005388	si:dkey-16l2.16	79	35.882
ENSGAFG00000020102	si:dkey-13a21.4	73	36.129	ENSGAFG00000015249	-	63	36.129
ENSGAFG00000020102	si:dkey-13a21.4	76	40.000	ENSGAFG00000008560	rab18b	74	40.000
ENSGAFG00000020102	si:dkey-13a21.4	77	34.375	ENSGAFG00000005679	rab11ba	71	34.375
ENSGAFG00000020102	si:dkey-13a21.4	84	34.682	ENSGAFG00000002756	rab15	79	34.682
ENSGAFG00000020102	si:dkey-13a21.4	75	37.179	ENSGAFG00000021202	zgc:101559	65	37.179
ENSGAFG00000020102	si:dkey-13a21.4	77	37.107	ENSGAFG00000002141	rab42a	72	37.107
ENSGAFG00000020102	si:dkey-13a21.4	96	32.836	ENSGAFG00000006356	rab6a	94	32.836
ENSGAFG00000020102	si:dkey-13a21.4	88	34.254	ENSGAFG00000005477	rab4a	83	34.254
ENSGAFG00000020102	si:dkey-13a21.4	77	37.736	ENSGAFG00000006932	-	73	37.736
ENSGAFG00000020102	si:dkey-13a21.4	79	35.583	ENSGAFG00000000884	rab5c	72	35.583
ENSGAFG00000020102	si:dkey-13a21.4	71	31.724	ENSGAFG00000021765	kras	80	32.692
ENSGAFG00000020102	si:dkey-13a21.4	87	55.056	ENSGAFG00000021688	-	86	55.056
ENSGAFG00000020102	si:dkey-13a21.4	73	36.667	ENSGAFG00000019659	rab33ba	61	36.667
ENSGAFG00000020102	si:dkey-13a21.4	77	38.365	ENSGAFG00000001301	rab22a	80	38.365
ENSGAFG00000020102	si:dkey-13a21.4	97	30.769	ENSGAFG00000017305	RAB15	97	30.769
ENSGAFG00000020102	si:dkey-13a21.4	75	32.258	ENSGAFG00000021738	rhebl1	82	32.258
ENSGAFG00000020102	si:dkey-13a21.4	80	30.723	ENSGAFG00000010126	rasd4	77	30.723
ENSGAFG00000020102	si:dkey-13a21.4	77	35.000	ENSGAFG00000007102	rab11bb	71	35.000
ENSGAFG00000020102	si:dkey-13a21.4	78	52.174	ENSGAFG00000018916	-	71	52.174
ENSGAFG00000020102	si:dkey-13a21.4	91	38.172	ENSGAFG00000007684	rab23	77	38.172
ENSGAFG00000020102	si:dkey-13a21.4	83	36.257	ENSGAFG00000014787	-	84	36.257
ENSGAFG00000020102	si:dkey-13a21.4	75	30.968	ENSGAFG00000020906	rheb	82	30.968
ENSGAFG00000020102	si:dkey-13a21.4	96	34.314	ENSGAFG00000015490	rab33a	71	34.314
ENSGAFG00000020102	si:dkey-13a21.4	80	38.788	ENSGAFG00000015702	zgc:171927	65	38.788
ENSGAFG00000020102	si:dkey-13a21.4	74	30.818	ENSGAFG00000019285	rasl11b	63	30.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000020102	si:dkey-13a21.4	100	81.373	ENSACIG00000011024	si:dkey-13a21.4	100	81.373	Amphilophus_citrinellus
ENSGAFG00000020102	si:dkey-13a21.4	100	81.373	ENSAOCG00000020491	si:dkey-13a21.4	100	81.373	Amphiprion_ocellaris
ENSGAFG00000020102	si:dkey-13a21.4	100	81.373	ENSAPEG00000023338	si:dkey-13a21.4	92	81.373	Amphiprion_percula
ENSGAFG00000020102	si:dkey-13a21.4	100	79.902	ENSATEG00000014958	si:dkey-13a21.4	100	79.902	Anabas_testudineus
ENSGAFG00000020102	si:dkey-13a21.4	96	51.282	ENSACAG00000012345	-	97	51.282	Anolis_carolinensis
ENSGAFG00000020102	si:dkey-13a21.4	100	82.353	ENSACLG00000021109	si:dkey-13a21.4	99	82.353	Astatotilapia_calliptera
ENSGAFG00000020102	si:dkey-13a21.4	100	51.185	ENSAMXG00000032663	si:dkey-13a21.4	97	51.185	Astyanax_mexicanus
ENSGAFG00000020102	si:dkey-13a21.4	89	53.552	WBGene00004271	rab-7	100	48.804	Caenorhabditis_elegans
ENSGAFG00000020102	si:dkey-13a21.4	100	89.216	ENSCVAG00000001150	si:dkey-13a21.4	100	89.216	Cyprinodon_variegatus
ENSGAFG00000020102	si:dkey-13a21.4	100	61.765	ENSDARG00000026098	si:dkey-13a21.4	99	61.765	Danio_rerio
ENSGAFG00000020102	si:dkey-13a21.4	87	50.000	ENSDNOG00000043559	-	96	47.475	Dasypus_novemcinctus
ENSGAFG00000020102	si:dkey-13a21.4	100	86.829	ENSFHEG00000002502	si:dkey-13a21.4	100	86.829	Fundulus_heteroclitus
ENSGAFG00000020102	si:dkey-13a21.4	100	82.843	ENSHBUG00000014023	si:dkey-13a21.4	99	82.843	Haplochromis_burtoni
ENSGAFG00000020102	si:dkey-13a21.4	86	80.114	ENSKMAG00000021039	si:dkey-13a21.4	74	80.114	Kryptolebias_marmoratus
ENSGAFG00000020102	si:dkey-13a21.4	100	81.373	ENSLBEG00000018180	si:dkey-13a21.4	100	81.373	Labrus_bergylta
ENSGAFG00000020102	si:dkey-13a21.4	100	59.709	ENSLOCG00000014749	si:dkey-13a21.4	100	59.709	Lepisosteus_oculatus
ENSGAFG00000020102	si:dkey-13a21.4	84	55.556	ENSLAFG00000028984	-	83	55.556	Loxodonta_africana
ENSGAFG00000020102	si:dkey-13a21.4	100	80.882	ENSMAMG00000021095	si:dkey-13a21.4	100	80.882	Mastacembelus_armatus
ENSGAFG00000020102	si:dkey-13a21.4	100	82.353	ENSMZEG00005010220	si:dkey-13a21.4	99	82.353	Maylandia_zebra
ENSGAFG00000020102	si:dkey-13a21.4	99	82.673	ENSNBRG00000023214	si:dkey-13a21.4	98	82.673	Neolamprologus_brichardi
ENSGAFG00000020102	si:dkey-13a21.4	100	82.353	ENSONIG00000020296	si:dkey-13a21.4	100	82.353	Oreochromis_niloticus
ENSGAFG00000020102	si:dkey-13a21.4	100	78.431	ENSORLG00000025098	si:dkey-13a21.4	100	78.431	Oryzias_latipes
ENSGAFG00000020102	si:dkey-13a21.4	100	78.922	ENSORLG00020019465	si:dkey-13a21.4	100	78.922	Oryzias_latipes_hni
ENSGAFG00000020102	si:dkey-13a21.4	100	78.922	ENSORLG00015015121	si:dkey-13a21.4	100	78.922	Oryzias_latipes_hsok
ENSGAFG00000020102	si:dkey-13a21.4	96	62.437	ENSPKIG00000008691	si:dkey-13a21.4	96	62.437	Paramormyrops_kingsleyae
ENSGAFG00000020102	si:dkey-13a21.4	99	75.248	ENSPMGG00000023170	si:dkey-13a21.4	96	75.248	Periophthalmus_magnuspinnatus
ENSGAFG00000020102	si:dkey-13a21.4	100	98.039	ENSPFOG00000015409	si:dkey-13a21.4	100	98.039	Poecilia_formosa
ENSGAFG00000020102	si:dkey-13a21.4	100	98.039	ENSPLAG00000019688	si:dkey-13a21.4	100	98.039	Poecilia_latipinna
ENSGAFG00000020102	si:dkey-13a21.4	100	98.039	ENSPMEG00000019159	si:dkey-13a21.4	100	98.039	Poecilia_mexicana
ENSGAFG00000020102	si:dkey-13a21.4	100	95.588	ENSPREG00000022241	si:dkey-13a21.4	100	95.588	Poecilia_reticulata
ENSGAFG00000020102	si:dkey-13a21.4	100	82.353	ENSPNYG00000018613	si:dkey-13a21.4	99	82.353	Pundamilia_nyererei
ENSGAFG00000020102	si:dkey-13a21.4	96	45.274	YML001W	YPT7	96	45.274	Saccharomyces_cerevisiae
ENSGAFG00000020102	si:dkey-13a21.4	96	61.224	ENSSFOG00015009566	si:dkey-13a21.4	96	61.224	Scleropages_formosus
ENSGAFG00000020102	si:dkey-13a21.4	99	79.803	ENSSMAG00000013945	si:dkey-13a21.4	99	79.803	Scophthalmus_maximus
ENSGAFG00000020102	si:dkey-13a21.4	100	82.843	ENSSDUG00000019738	si:dkey-13a21.4	100	82.843	Seriola_dumerili
ENSGAFG00000020102	si:dkey-13a21.4	100	83.333	ENSSLDG00000011597	si:dkey-13a21.4	100	83.333	Seriola_lalandi_dorsalis
ENSGAFG00000020102	si:dkey-13a21.4	96	53.846	ENSXETG00000014257	mgc75872	97	53.846	Xenopus_tropicalis